RNA–Protein interactions for RNA: ENST00000473062.1

CLCC1-208, Transcript of chloride channel CLIC like 1, humanhuman

TSL 3

Gene CLCC1, Length 319 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-208ENST00000473062 ISYNA1Q9NPH2 558 aa2.11□□□□□ -2.07
CLCC1-208ENST00000473062 ZNF639Q9UID6 485 aa2.11□□□□□ -2.07
CLCC1-208ENST00000473062 PRG3Q9Y2Y8 225 aaPredicted RBP2.11□□□□□ -2.07
CLCC1-208ENST00000473062 IKBKGQ9Y6K9 419 aa2.11□□□□□ -2.07
CLCC1-208ENST00000473062 CENPJQ9HC77 1338 aaPredicted RBP2.11□□□□□ -2.07
CLCC1-208ENST00000473062 MSH6P52701 1360 aa2.1□□□□□ -2.07
CLCC1-208ENST00000473062 NACAE9PAV3 2078 aa2.1□□□□□ -2.07
CLCC1-208ENST00000473062 INS-IGF2F8WCM5 200 aa2.1□□□□□ -2.07
CLCC1-208ENST00000473062 TMEM50AO95807 157 aa2.1□□□□□ -2.07
CLCC1-208ENST00000473062 ATP1B2P14415 290 aaPredicted RBP2.1□□□□□ -2.07
CLCC1-208ENST00000473062 NCK1P16333 377 aa2.1□□□□□ -2.07
CLCC1-208ENST00000473062 ZNF30P17039 623 aa2.1□□□□□ -2.07
CLCC1-208ENST00000473062 ZNF136P52737 540 aa2.1□□□□□ -2.07
CLCC1-208ENST00000473062 FGF8P55075 233 aaPredicted RBP2.1□□□□□ -2.07
CLCC1-208ENST00000473062 ACTA2P62736 377 aa2.1□□□□□ -2.07
CLCC1-208ENST00000473062 ACTC1P68032 377 aa2.1□□□□□ -2.07
CLCC1-208ENST00000473062 SLC7A9P82251 487 aa2.1□□□□□ -2.07
CLCC1-208ENST00000473062 BST2Q10589 180 aaKnown RBP2.1□□□□□ -2.07
CLCC1-208ENST00000473062 EIF4EBP1Q13541 118 aaPredicted RBP2.1□□□□□ -2.07
CLCC1-208ENST00000473062 DDX39BQ13838 428 aaKnown RBP2.1□□□□□ -2.07
CLCC1-208ENST00000473062 GUCA2BQ16661 112 aa2.1□□□□□ -2.07
CLCC1-208ENST00000473062 C5orf47Q569G3 176 aa2.1□□□□□ -2.07
CLCC1-208ENST00000473062 SLC25A48Q6ZT89 311 aaKnown RBP2.1□□□□□ -2.07
CLCC1-208ENST00000473062 BHLHA15Q7RTS1 189 aaPredicted RBP2.1□□□□□ -2.07
CLCC1-208ENST00000473062 HDDC2Q7Z4H3 204 aa2.1□□□□□ -2.07
CLCC1-208ENST00000473062 PRSS58Q8IYP2 241 aa2.1□□□□□ -2.07
CLCC1-208ENST00000473062 LIX1Q8N485 282 aa2.1□□□□□ -2.07
CLCC1-208ENST00000473062 ARRDC1Q8N5I2 433 aa2.1□□□□□ -2.07
CLCC1-208ENST00000473062 OR4F6Q8NGB9 312 aa2.1□□□□□ -2.07
CLCC1-208ENST00000473062 CXorf40AQ8TE69 158 aa2.1□□□□□ -2.07
CLCC1-208ENST00000473062 TPD52L3Q96J77 140 aa2.1□□□□□ -2.07
CLCC1-208ENST00000473062 RNF157Q96PX1 679 aa2.1□□□□□ -2.07
CLCC1-208ENST00000473062 FMO2Q99518 471 aa2.1□□□□□ -2.07
CLCC1-208ENST00000473062 TMEM59Q9BXS4 323 aa2.1□□□□□ -2.07
CLCC1-208ENST00000473062 ROPN1BQ9BZX4 212 aaPredicted RBP2.1□□□□□ -2.07
CLCC1-208ENST00000473062 NOX3Q9HBY0 568 aa2.1□□□□□ -2.07
CLCC1-208ENST00000473062 ZDHHC4Q9NPG8 344 aa2.1□□□□□ -2.07
CLCC1-208ENST00000473062 NECAP2Q9NVZ3 263 aa2.1□□□□□ -2.07
CLCC1-208ENST00000473062 HYPKQ9NX55 129 aa2.1□□□□□ -2.07
CLCC1-208ENST00000473062 SLC2A8Q9NY64 477 aa2.1□□□□□ -2.07
CLCC1-208ENST00000473062 ZNF629Q9UEG4 869 aaPredicted RBP2.1□□□□□ -2.07
CLCC1-208ENST00000473062 LTBP1Q14766 1721 aa2.1□□□□□ -2.07
CLCC1-208ENST00000473062 MROH7-TTC4A0A0A0MT08 1334 aa2.1□□□□□ -2.07
CLCC1-208ENST00000473062 NOTCH2Q04721 2471 aa2.1□□□□□ -2.07
CLCC1-208ENST00000473062 SCN2AQ99250 2005 aa2.1□□□□□ -2.07
CLCC1-208ENST00000473062 ARHGAP21Q5T5U3 1957 aa2.09□□□□□ -2.07
CLCC1-208ENST00000473062 A0A1W2PP18 115 aa2.09□□□□□ -2.07
CLCC1-208ENST00000473062 BTBD17A6NE02 478 aa2.09□□□□□ -2.07
CLCC1-208ENST00000473062 ANKRD63C9JTQ0 380 aa2.09□□□□□ -2.07
CLCC1-208ENST00000473062 CDC7O00311 574 aa2.09□□□□□ -2.07
CLCC1-208ENST00000473062 GOSR2O14653 212 aa2.09□□□□□ -2.07
CLCC1-208ENST00000473062 PALMO75781 387 aa2.09□□□□□ -2.07
CLCC1-208ENST00000473062 VAMP5O95183 116 aa2.09□□□□□ -2.07
CLCC1-208ENST00000473062 C6orf47O95873 294 aa2.09□□□□□ -2.07
CLCC1-208ENST00000473062 SERPIND1P05546 499 aa2.09□□□□□ -2.07
CLCC1-208ENST00000473062 CCNB1P14635 433 aa2.09□□□□□ -2.07
CLCC1-208ENST00000473062 ETS2P15036 469 aa2.09□□□□□ -2.07
CLCC1-208ENST00000473062 WARSP23381 471 aaKnown RBP2.09□□□□□ -2.07
CLCC1-208ENST00000473062 SSR4P51571 173 aa2.09□□□□□ -2.07
CLCC1-208ENST00000473062 ARFIP1P53367 373 aa2.09□□□□□ -2.07
CLCC1-208ENST00000473062 YWHAGP61981 247 aaKnown RBP eCLIP2.09□□□□□ -2.07
CLCC1-208ENST00000473062 RPS21P63220 83 aaKnown RBP2.09□□□□□ -2.07
CLCC1-208ENST00000473062 SLAQ13239 276 aa2.09□□□□□ -2.07
CLCC1-208ENST00000473062 PTGES3Q15185 160 aaKnown RBP2.09□□□□□ -2.07
CLCC1-208ENST00000473062 RABL6Q3YEC7 729 aaPredicted RBP2.09□□□□□ -2.07
CLCC1-208ENST00000473062 VPS26BQ4G0F5 336 aa2.09□□□□□ -2.07
CLCC1-208ENST00000473062 CCNJQ5T5M9 372 aa2.09□□□□□ -2.07
CLCC1-208ENST00000473062 HES5Q5TA89 166 aa2.09□□□□□ -2.07
CLCC1-208ENST00000473062 PRAMEF5Q5TYX0 476 aa2.09□□□□□ -2.07
CLCC1-208ENST00000473062 PRAMEF6Q5VXH4 476 aa2.09□□□□□ -2.07
CLCC1-208ENST00000473062 LHFPL3Q86UP9 236 aa2.09□□□□□ -2.07
CLCC1-208ENST00000473062 PUSL1Q8N0Z8 303 aaKnown RBP2.09□□□□□ -2.07
CLCC1-208ENST00000473062 PDIK1LQ8N165 341 aa2.09□□□□□ -2.07
CLCC1-208ENST00000473062 Q8N976 141 aa2.09□□□□□ -2.07
CLCC1-208ENST00000473062 ZFP90Q8TF47 636 aa2.09□□□□□ -2.07
CLCC1-208ENST00000473062 MED8Q96G25 268 aa2.09□□□□□ -2.07
CLCC1-208ENST00000473062 CNDP1Q96KN2 507 aa2.09□□□□□ -2.07
CLCC1-208ENST00000473062 LINC00477Q96M19 166 aa2.09□□□□□ -2.07
CLCC1-208ENST00000473062 SPIN2AQ99865 258 aa2.09□□□□□ -2.07
CLCC1-208ENST00000473062 RARRES2Q99969 163 aa2.09□□□□□ -2.07
CLCC1-208ENST00000473062 SPIN2BQ9BPZ2 258 aa2.09□□□□□ -2.07
CLCC1-208ENST00000473062 MRPL37Q9BZE1 423 aaKnown RBP2.09□□□□□ -2.07
CLCC1-208ENST00000473062 RPP21Q9H633 154 aaKnown RBP2.09□□□□□ -2.07
CLCC1-208ENST00000473062 HMG20AQ9NP66 347 aa2.09□□□□□ -2.07
CLCC1-208ENST00000473062 SLCO1B3Q9NPD5 702 aa2.09□□□□□ -2.07
CLCC1-208ENST00000473062 SAMSN1Q9NSI8 373 aaKnown RBP2.09□□□□□ -2.07
CLCC1-208ENST00000473062 KLHL28Q9NXS3 571 aa2.09□□□□□ -2.07
CLCC1-208ENST00000473062 PSMC3IPQ9P2W1 217 aaPredicted RBP2.09□□□□□ -2.07
CLCC1-208ENST00000473062 ATP10AO60312 1499 aa2.08□□□□□ -2.08
CLCC1-208ENST00000473062 IGHV3-74A0A0B4J1X5 117 aa2.08□□□□□ -2.08
CLCC1-208ENST00000473062 IGHV5-51A0A0C4DH38 117 aa2.08□□□□□ -2.08
CLCC1-208ENST00000473062 A0A1B0GVI7 797 aa2.08□□□□□ -2.08
CLCC1-208ENST00000473062 A0A1W2PPE3 182 aa2.08□□□□□ -2.08
CLCC1-208ENST00000473062 PLAC8L1A1L4L8 177 aa2.08□□□□□ -2.08
CLCC1-208ENST00000473062 C11orf94C9JXX5 98 aa2.08□□□□□ -2.08
CLCC1-208ENST00000473062 MPHOSPH10O00566 681 aaKnown RBP2.08□□□□□ -2.08
CLCC1-208ENST00000473062 KMOO15229 486 aa2.08□□□□□ -2.08
CLCC1-208ENST00000473062 EEDO75530 441 aaKnown RBP2.08□□□□□ -2.08
CLCC1-208ENST00000473062 CTDNEP1O95476 244 aa2.08□□□□□ -2.08
CLCC1-208ENST00000473062 HLA-DPB1P04440 258 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms