RNA–Protein interactions for RNA: ENST00000472725.5

SF1-213, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 632 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-213ENST00000472725 COL12A1Q99715 3063 aa17.55■□□□□ 0.4
SF1-213ENST00000472725 CASKO14936 926 aa17.55■□□□□ 0.4
SF1-213ENST00000472725 DHHO43323 396 aa17.55■□□□□ 0.4
SF1-213ENST00000472725 RAD51DO75771 328 aa17.55■□□□□ 0.4
SF1-213ENST00000472725 QDPRP09417 244 aa17.55■□□□□ 0.4
SF1-213ENST00000472725 PRKACGP22612 351 aa17.55■□□□□ 0.4
SF1-213ENST00000472725 HOXC12P31275 282 aa17.55■□□□□ 0.4
SF1-213ENST00000472725 RUNX1T1Q06455 604 aa17.55■□□□□ 0.4
SF1-213ENST00000472725 KRR1Q13601 381 aaKnown RBP17.55■□□□□ 0.4
SF1-213ENST00000472725 DAZAP2Q15038 168 aaPredicted RBP17.55■□□□□ 0.4
SF1-213ENST00000472725 WDFY1Q8IWB7 410 aa17.55■□□□□ 0.4
SF1-213ENST00000472725 PQLC1Q8N2U9 271 aa17.55■□□□□ 0.4
SF1-213ENST00000472725 LNX2Q8N448 690 aa17.55■□□□□ 0.4
SF1-213ENST00000472725 OR2T33Q8NG76 320 aa17.55■□□□□ 0.4
SF1-213ENST00000472725 TEX47Q8TBZ9 253 aa17.55■□□□□ 0.4
SF1-213ENST00000472725 MCHR2Q969V1 340 aa17.55■□□□□ 0.4
SF1-213ENST00000472725 NMD3Q96D46 503 aaKnown RBP17.55■□□□□ 0.4
SF1-213ENST00000472725 MUCL1Q96DR8 90 aa17.55■□□□□ 0.4
SF1-213ENST00000472725 SEMA6AQ9H2E6 1030 aa17.55■□□□□ 0.4
SF1-213ENST00000472725 EGLN3Q9H6Z9 239 aa17.55■□□□□ 0.4
SF1-213ENST00000472725 NGBQ9NPG2 151 aa17.55■□□□□ 0.4
SF1-213ENST00000472725 PAPOLBQ9NRJ5 636 aaKnown RBP17.55■□□□□ 0.4
SF1-213ENST00000472725 CRIM1Q9NZV1 1036 aa17.55■□□□□ 0.4
SF1-213ENST00000472725 AMDHD2Q9Y303 409 aa17.55■□□□□ 0.4
SF1-213ENST00000472725 MAGED1Q9Y5V3 778 aaPredicted RBP17.55■□□□□ 0.4
SF1-213ENST00000472725 TEX13CA0A0J9YWL9 993 aa17.54■□□□□ 0.4
SF1-213ENST00000472725 PRSS37A4D1T9 235 aa17.54■□□□□ 0.4
SF1-213ENST00000472725 BHLHE40O14503 412 aa17.54■□□□□ 0.4
SF1-213ENST00000472725 ARHGEF9O43307 516 aa17.54■□□□□ 0.4
SF1-213ENST00000472725 PPP1R3DO95685 299 aa17.54■□□□□ 0.4
SF1-213ENST00000472725 TP53P04637 393 aaPredicted RBP17.54■□□□□ 0.4
SF1-213ENST00000472725 NOS3P29474 1203 aa17.54■□□□□ 0.4
SF1-213ENST00000472725 ZNF84P51523 738 aa17.54■□□□□ 0.4
SF1-213ENST00000472725 FOXG1P55316 489 aaPredicted RBP17.54■□□□□ 0.4
SF1-213ENST00000472725 CD47Q08722 323 aa17.54■□□□□ 0.4
SF1-213ENST00000472725 MESTQ5EB52 335 aa17.54■□□□□ 0.4
SF1-213ENST00000472725 SYT14Q8NB59 555 aa17.54■□□□□ 0.4
SF1-213ENST00000472725 LINC01560Q8TB33 94 aa17.54■□□□□ 0.4
SF1-213ENST00000472725 BCL2L2Q92843 193 aaPredicted RBP17.54■□□□□ 0.4
SF1-213ENST00000472725 TSSK6Q9BXA6 273 aa17.54■□□□□ 0.4
SF1-213ENST00000472725 SLC17A5Q9NRA2 495 aa17.54■□□□□ 0.4
SF1-213ENST00000472725 VSX1Q9NZR4 365 aaPredicted RBP17.54■□□□□ 0.4
SF1-213ENST00000472725 IL20RAQ9UHF4 553 aa17.54■□□□□ 0.4
SF1-213ENST00000472725 OAZ3Q9UMX2 235 aa17.54■□□□□ 0.4
SF1-213ENST00000472725 ARPC4-TTLL3A0A0A6YYG9 625 aa17.53■□□□□ 0.4
SF1-213ENST00000472725 SLC22A23A1A5C7 686 aa17.53■□□□□ 0.4
SF1-213ENST00000472725 H3BN98 237 aa17.53■□□□□ 0.4
SF1-213ENST00000472725 CRYGSP22914 178 aa17.53■□□□□ 0.4
SF1-213ENST00000472725 DAPP51397 102 aa17.53■□□□□ 0.4
SF1-213ENST00000472725 ESRRGP62508 458 aa17.53■□□□□ 0.4
SF1-213ENST00000472725 ARF1P84077 181 aaKnown RBP17.53■□□□□ 0.4
SF1-213ENST00000472725 SLC36A3Q495N2 470 aa17.53■□□□□ 0.4
SF1-213ENST00000472725 KDM4DQ6B0I6 523 aa17.53■□□□□ 0.4
SF1-213ENST00000472725 SLC25A47Q6Q0C1 308 aa17.53■□□□□ 0.4
SF1-213ENST00000472725 KLHL24Q6TFL4 600 aa17.53■□□□□ 0.4
SF1-213ENST00000472725 C14orf79Q96F83 325 aa17.53■□□□□ 0.4
SF1-213ENST00000472725 FOXB1Q99853 325 aa17.53■□□□□ 0.4
SF1-213ENST00000472725 RBM4BQ9BQ04 359 aaKnown RBP17.53■□□□□ 0.4
SF1-213ENST00000472725 RBM4Q9BWF3 364 aaKnown RBP17.53■□□□□ 0.4
SF1-213ENST00000472725 PLA2G12AQ9BZM1 189 aa17.53■□□□□ 0.4
SF1-213ENST00000472725 BAHCC1Q9P281 2608 aa17.53■□□□□ 0.4
SF1-213ENST00000472725 PTPN13Q12923 2485 aa17.53■□□□□ 0.4
SF1-213ENST00000472725 ANKRD65E5RJM6 399 aa17.52■□□□□ 0.4
SF1-213ENST00000472725 SOCS2O14508 198 aa17.52■□□□□ 0.4
SF1-213ENST00000472725 WNT11O96014 354 aa17.52■□□□□ 0.4
SF1-213ENST00000472725 PPA1Q15181 289 aa17.52■□□□□ 0.4
SF1-213ENST00000472725 TSC22D1Q15714 1073 aa17.52■□□□□ 0.4
SF1-213ENST00000472725 TAB1Q15750 504 aa17.52■□□□□ 0.4
SF1-213ENST00000472725 TBRG1Q3YBR2 411 aa17.52■□□□□ 0.4
SF1-213ENST00000472725 CLEC12AQ5QGZ9 265 aa17.52■□□□□ 0.4
SF1-213ENST00000472725 C9orf135Q5VTT2 229 aa17.52■□□□□ 0.4
SF1-213ENST00000472725 ANKRD34AQ69YU3 496 aa17.52■□□□□ 0.4
SF1-213ENST00000472725 SLC27A4Q6P1M0 643 aa17.52■□□□□ 0.4
SF1-213ENST00000472725 DPPA2Q7Z7J5 298 aa17.52■□□□□ 0.4
SF1-213ENST00000472725 JAZF1Q86VZ6 243 aa17.52■□□□□ 0.4
SF1-213ENST00000472725 ICA1LQ8NDH6 482 aa17.52■□□□□ 0.4
SF1-213ENST00000472725 OR8D4Q8NGM9 314 aa17.52■□□□□ 0.4
SF1-213ENST00000472725 RASD2Q96D21 266 aa17.52■□□□□ 0.4
SF1-213ENST00000472725 ZNF837Q96EG3 531 aaPredicted RBP17.52■□□□□ 0.4
SF1-213ENST00000472725 TEX12Q9BXU0 123 aa17.52■□□□□ 0.4
SF1-213ENST00000472725 KRT84Q9NSB2 600 aa17.52■□□□□ 0.4
SF1-213ENST00000472725 KLHL21Q9UJP4 597 aa17.52■□□□□ 0.4
SF1-213ENST00000472725 ANKHD1Q8IWZ3 2542 aaKnown RBP17.52■□□□□ 0.39
SF1-213ENST00000472725 FARS2O95363 451 aaKnown RBP17.51■□□□□ 0.39
SF1-213ENST00000472725 SOX14O95416 240 aa17.51■□□□□ 0.39
SF1-213ENST00000472725 RENP00797 406 aa17.51■□□□□ 0.39
SF1-213ENST00000472725 THBDP07204 575 aa17.51■□□□□ 0.39
SF1-213ENST00000472725 CDH2P19022 906 aaPredicted RBP17.51■□□□□ 0.39
SF1-213ENST00000472725 NPR2P20594 1047 aa17.51■□□□□ 0.39
SF1-213ENST00000472725 COL8A1P27658 744 aa17.51■□□□□ 0.39
SF1-213ENST00000472725 CRABP1P29762 137 aa17.51■□□□□ 0.39
SF1-213ENST00000472725 GRK5P34947 590 aa17.51■□□□□ 0.39
SF1-213ENST00000472725 GUCA1AP43080 201 aaPredicted RBP17.51■□□□□ 0.39
SF1-213ENST00000472725 GIPRP48546 466 aa17.51■□□□□ 0.39
SF1-213ENST00000472725 UBE2NP61088 152 aaKnown RBP17.51■□□□□ 0.39
SF1-213ENST00000472725 MRPS34P82930 218 aaKnown RBP17.51■□□□□ 0.39
SF1-213ENST00000472725 PPP2R2BQ00005 443 aa17.51■□□□□ 0.39
SF1-213ENST00000472725 DNM1P34Q6PK57 102 aa17.51■□□□□ 0.39
SF1-213ENST00000472725 ZNF813Q6ZN06 617 aa17.51■□□□□ 0.39
SF1-213ENST00000472725 FAM169BQ8N8A8 192 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms