RNA–Protein interactions for RNA: ENST00000472155.5

UBXN11-213, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,646 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-213ENST00000472155 COLQQ9Y215 455 aaPredicted RBP13.54□□□□□ -0.24
UBXN11-213ENST00000472155 NCOR1O75376 2440 aa13.54□□□□□ -0.24
UBXN11-213ENST00000472155 GPR179Q6PRD1 2367 aa13.54□□□□□ -0.24
UBXN11-213ENST00000472155 TRBV11-1A0A0K0K1C0 115 aa13.54□□□□□ -0.24
UBXN11-213ENST00000472155 PRSS37A4D1T9 235 aa13.54□□□□□ -0.24
UBXN11-213ENST00000472155 PATE3B3GLJ2 98 aa13.54□□□□□ -0.24
UBXN11-213ENST00000472155 GPRIN2O60269 458 aa13.54□□□□□ -0.24
UBXN11-213ENST00000472155 HEXBP07686 556 aa13.54□□□□□ -0.24
UBXN11-213ENST00000472155 SGCBQ16585 318 aa13.54□□□□□ -0.24
UBXN11-213ENST00000472155 YIF1BQ5BJH7 314 aa13.54□□□□□ -0.24
UBXN11-213ENST00000472155 WDR38Q5JTN6 314 aa13.54□□□□□ -0.24
UBXN11-213ENST00000472155 BEST4Q8NFU0 473 aa13.54□□□□□ -0.24
UBXN11-213ENST00000472155 ABRACLQ9P1F3 81 aa13.54□□□□□ -0.24
UBXN11-213ENST00000472155 GTF2A1LQ9UNN4 478 aa13.54□□□□□ -0.24
UBXN11-213ENST00000472155 H3BML4 177 aa13.53□□□□□ -0.24
UBXN11-213ENST00000472155 PLPP3O14495 311 aa13.53□□□□□ -0.24
UBXN11-213ENST00000472155 XKRYO14609 159 aa13.53□□□□□ -0.24
UBXN11-213ENST00000472155 EFNA2O43921 213 aa13.53□□□□□ -0.24
UBXN11-213ENST00000472155 UBL3O95164 117 aa13.53□□□□□ -0.24
UBXN11-213ENST00000472155 RPL27P61353 136 aaKnown RBP13.53□□□□□ -0.24
UBXN11-213ENST00000472155 HSF2Q03933 536 aa13.53□□□□□ -0.24
UBXN11-213ENST00000472155 HYAL4Q2M3T9 481 aa13.53□□□□□ -0.24
UBXN11-213ENST00000472155 LYSMD4Q5XG99 296 aa13.53□□□□□ -0.24
UBXN11-213ENST00000472155 FAAP20Q6NZ36 180 aa13.53□□□□□ -0.24
UBXN11-213ENST00000472155 PAPD4Q6PIY7 484 aaKnown RBP13.53□□□□□ -0.24
UBXN11-213ENST00000472155 FAM220AQ7Z4H9 259 aa13.53□□□□□ -0.24
UBXN11-213ENST00000472155 TOMM5Q8N4H5 51 aa13.53□□□□□ -0.24
UBXN11-213ENST00000472155 ELOVL3Q9HB03 270 aa13.53□□□□□ -0.24
UBXN11-213ENST00000472155 KLK11Q9UBX7 282 aa13.53□□□□□ -0.24
UBXN11-213ENST00000472155 AIPO00170 330 aa13.53□□□□□ -0.24
UBXN11-213ENST00000472155 DXOO77932 396 aaKnown RBP13.53□□□□□ -0.24
UBXN11-213ENST00000472155 CD1AP06126 327 aa13.53□□□□□ -0.24
UBXN11-213ENST00000472155 SPARCP09486 303 aa13.53□□□□□ -0.24
UBXN11-213ENST00000472155 CAPZA2P47755 286 aa13.53□□□□□ -0.24
UBXN11-213ENST00000472155 MFGE8Q08431 387 aaPredicted RBP13.53□□□□□ -0.24
UBXN11-213ENST00000472155 BCL2A1Q16548 175 aa13.53□□□□□ -0.24
UBXN11-213ENST00000472155 Q499Y3 187 aa13.53□□□□□ -0.24
UBXN11-213ENST00000472155 EMC4Q5J8M3 183 aa13.53□□□□□ -0.24
UBXN11-213ENST00000472155 ASPHD2Q6ICH7 369 aa13.53□□□□□ -0.24
UBXN11-213ENST00000472155 LINGO2Q7L985 606 aa13.53□□□□□ -0.24
UBXN11-213ENST00000472155 CARFQ8N187 725 aa13.53□□□□□ -0.24
UBXN11-213ENST00000472155 OTOSQ8NHW6 89 aa13.53□□□□□ -0.24
UBXN11-213ENST00000472155 SAP25Q8TEE9 199 aa13.53□□□□□ -0.24
UBXN11-213ENST00000472155 CCDC74BQ96LY2 380 aa13.53□□□□□ -0.24
UBXN11-213ENST00000472155 KLHL15Q96M94 604 aa13.53□□□□□ -0.24
UBXN11-213ENST00000472155 TMEM246Q9BRR3 403 aa13.53□□□□□ -0.24
UBXN11-213ENST00000472155 OR2B2Q9GZK3 357 aa13.53□□□□□ -0.24
UBXN11-213ENST00000472155 TMEM185BQ9H7F4 350 aa13.53□□□□□ -0.24
UBXN11-213ENST00000472155 C12orf10Q9HB07 376 aa13.53□□□□□ -0.24
UBXN11-213ENST00000472155 MOV10Q9HCE1 1003 aaKnown RBP13.53□□□□□ -0.24
UBXN11-213ENST00000472155 MED29Q9NX70 200 aa13.53□□□□□ -0.24
UBXN11-213ENST00000472155 V9GY05 133 aa13.53□□□□□ -0.24
UBXN11-213ENST00000472155 PHF3Q92576 2039 aaKnown RBP13.52□□□□□ -0.24
UBXN11-213ENST00000472155 IGLV1-36A0A0B4J1U3 117 aa13.52□□□□□ -0.24
UBXN11-213ENST00000472155 TRABD2BA6NFA1 517 aa13.52□□□□□ -0.24
UBXN11-213ENST00000472155 A8MVM7 634 aa13.52□□□□□ -0.24
UBXN11-213ENST00000472155 FTCDNL1E5RQL4 147 aa13.52□□□□□ -0.24
UBXN11-213ENST00000472155 MASP2O00187 686 aa13.52□□□□□ -0.24
UBXN11-213ENST00000472155 ORC5O43913 435 aa13.52□□□□□ -0.24
UBXN11-213ENST00000472155 GMDSO60547 372 aa13.52□□□□□ -0.24
UBXN11-213ENST00000472155 TRAPPC2P0DI81 140 aa13.52□□□□□ -0.24
UBXN11-213ENST00000472155 TRAPPC2BP0DI82 140 aa13.52□□□□□ -0.24
UBXN11-213ENST00000472155 MMP15P51511 669 aa13.52□□□□□ -0.24
UBXN11-213ENST00000472155 SQSTM1Q13501 440 aa13.52□□□□□ -0.24
UBXN11-213ENST00000472155 OR7A5Q15622 319 aa13.52□□□□□ -0.24
UBXN11-213ENST00000472155 HLA-BQ31612 363 aa13.52□□□□□ -0.24
UBXN11-213ENST00000472155 GRINAQ7Z429 371 aa13.52□□□□□ -0.24
UBXN11-213ENST00000472155 LRRTM1Q86UE6 522 aa13.52□□□□□ -0.24
UBXN11-213ENST00000472155 GLB1L2Q8IW92 636 aa13.52□□□□□ -0.24
UBXN11-213ENST00000472155 EID2Q8N6I1 236 aa13.52□□□□□ -0.24
UBXN11-213ENST00000472155 ZNF676Q8N7Q3 588 aa13.52□□□□□ -0.24
UBXN11-213ENST00000472155 OR52I2Q8NH67 350 aa13.52□□□□□ -0.24
UBXN11-213ENST00000472155 TMEM106AQ96A25 262 aa13.52□□□□□ -0.24
UBXN11-213ENST00000472155 FLVCR2Q9UPI3 526 aa13.52□□□□□ -0.24
UBXN11-213ENST00000472155 COA3Q9Y2R0 106 aaPredicted RBP13.52□□□□□ -0.24
UBXN11-213ENST00000472155 SLC22A23A1A5C7 686 aa13.52□□□□□ -0.25
UBXN11-213ENST00000472155 MS4A18H0YCH9 400 aa13.52□□□□□ -0.25
UBXN11-213ENST00000472155 AKR7A2O43488 359 aa13.52□□□□□ -0.25
UBXN11-213ENST00000472155 ALOX12BO75342 701 aa13.52□□□□□ -0.25
UBXN11-213ENST00000472155 FCER2P06734 321 aa13.52□□□□□ -0.25
UBXN11-213ENST00000472155 CELA2AP08217 269 aa13.52□□□□□ -0.25
UBXN11-213ENST00000472155 RRAS2P62070 204 aaPredicted RBP13.52□□□□□ -0.25
UBXN11-213ENST00000472155 SNRPD2P62316 118 aaKnown RBP13.52□□□□□ -0.25
UBXN11-213ENST00000472155 FCN2Q15485 313 aa13.52□□□□□ -0.25
UBXN11-213ENST00000472155 MS4A18Q3C1V0 323 aa13.52□□□□□ -0.25
UBXN11-213ENST00000472155 GPR139Q6DWJ6 353 aa13.52□□□□□ -0.25
UBXN11-213ENST00000472155 SFRP4Q6FHJ7 346 aaPredicted RBP13.52□□□□□ -0.25
UBXN11-213ENST00000472155 OR7E24Q6IFN5 339 aa13.52□□□□□ -0.25
UBXN11-213ENST00000472155 BIVMQ86UB2 503 aa13.52□□□□□ -0.25
UBXN11-213ENST00000472155 KMT5CQ86Y97 462 aa13.52□□□□□ -0.25
UBXN11-213ENST00000472155 EMC6Q9BV81 110 aa13.52□□□□□ -0.25
UBXN11-213ENST00000472155 SEMA4CQ9C0C4 833 aa13.52□□□□□ -0.25
UBXN11-213ENST00000472155 TGIF2Q9GZN2 237 aa13.52□□□□□ -0.25
UBXN11-213ENST00000472155 TEKT2Q9UIF3 430 aa13.52□□□□□ -0.25
UBXN11-213ENST00000472155 FBXL3Q9UKT7 428 aa13.52□□□□□ -0.25
UBXN11-213ENST00000472155 IGLV3-12A0A075B6K2 115 aa13.51□□□□□ -0.25
UBXN11-213ENST00000472155 TRBV5-5A0A0J9YX44 114 aa13.51□□□□□ -0.25
UBXN11-213ENST00000472155 LOC101059948A0A1B0GTJ6 334 aa13.51□□□□□ -0.25
UBXN11-213ENST00000472155 TEX51A0A1B0GUA7 166 aa13.51□□□□□ -0.25
UBXN11-213ENST00000472155 TACSTD2P09758 323 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms