RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 PARP8Q8N3A8 854 aa16.03■□□□□ 0.16
SORT1-203ENST00000471996 C17orf53Q8N3J3 647 aaPredicted RBP16.03■□□□□ 0.16
SORT1-203ENST00000471996 ICA1LQ8NDH6 482 aa16.03■□□□□ 0.16
SORT1-203ENST00000471996 RSPO3Q9BXY4 272 aaPredicted RBP16.03■□□□□ 0.16
SORT1-203ENST00000471996 EGLN1Q9GZT9 426 aa16.03■□□□□ 0.16
SORT1-203ENST00000471996 KLHL14Q9P2G3 628 aa16.03■□□□□ 0.16
SORT1-203ENST00000471996 RYR3Q15413 4870 aa16.03■□□□□ 0.16
SORT1-203ENST00000471996 IGHV3OR16-10A0A075B7F0 116 aa16.02■□□□□ 0.16
SORT1-203ENST00000471996 E9PBE3 544 aa16.02■□□□□ 0.16
SORT1-203ENST00000471996 ENTPD5O75356 428 aa16.02■□□□□ 0.16
SORT1-203ENST00000471996 NGFP01138 241 aa16.02■□□□□ 0.16
SORT1-203ENST00000471996 SBK2P0C263 348 aa16.02■□□□□ 0.16
SORT1-203ENST00000471996 CSNK1A1P48729 337 aa16.02■□□□□ 0.16
SORT1-203ENST00000471996 MMP15P51511 669 aa16.02■□□□□ 0.16
SORT1-203ENST00000471996 TBC1D28Q2M2D7 210 aa16.02■□□□□ 0.16
SORT1-203ENST00000471996 SCAIQ8N9R8 606 aa16.02■□□□□ 0.16
SORT1-203ENST00000471996 BHLHE22Q8NFJ8 381 aaPredicted RBP16.02■□□□□ 0.16
SORT1-203ENST00000471996 OR1J2Q8NGS2 313 aa16.02■□□□□ 0.16
SORT1-203ENST00000471996 SLC35B4Q969S0 331 aa16.02■□□□□ 0.16
SORT1-203ENST00000471996 PPP1R36Q96LQ0 422 aa16.02■□□□□ 0.16
SORT1-203ENST00000471996 DIRC2Q96SL1 478 aa16.02■□□□□ 0.16
SORT1-203ENST00000471996 PATZ1Q9HBE1 687 aaKnown RBP16.02■□□□□ 0.16
SORT1-203ENST00000471996 MKS1Q9NXB0 559 aa16.02■□□□□ 0.16
SORT1-203ENST00000471996 RPS6KB2Q9UBS0 482 aa16.02■□□□□ 0.16
SORT1-203ENST00000471996 EGFL7Q9UHF1 273 aa16.02■□□□□ 0.16
SORT1-203ENST00000471996 MDFIC2A0A1B0GVS7 189 aa16.01■□□□□ 0.15
SORT1-203ENST00000471996 CLPSL1A2RUU4 121 aa16.01■□□□□ 0.15
SORT1-203ENST00000471996 SMIM23A6NLE4 172 aa16.01■□□□□ 0.15
SORT1-203ENST00000471996 A8MXK9 166 aa16.01■□□□□ 0.15
SORT1-203ENST00000471996 NDUFA7O95182 113 aa16.01■□□□□ 0.15
SORT1-203ENST00000471996 KRT75O95678 551 aa16.01■□□□□ 0.15
SORT1-203ENST00000471996 PLATP00750 562 aa16.01■□□□□ 0.15
SORT1-203ENST00000471996 PTHP01270 115 aa16.01■□□□□ 0.15
SORT1-203ENST00000471996 CRYBA1P05813 215 aa16.01■□□□□ 0.15
SORT1-203ENST00000471996 BCHEP06276 602 aa16.01■□□□□ 0.15
SORT1-203ENST00000471996 PPIAL4GP0DN37 164 aa16.01■□□□□ 0.15
SORT1-203ENST00000471996 KRTAP10-3P60369 221 aa16.01■□□□□ 0.15
SORT1-203ENST00000471996 SEC61A1P61619 476 aaKnown RBP16.01■□□□□ 0.15
SORT1-203ENST00000471996 RELBQ01201 579 aa16.01■□□□□ 0.15
SORT1-203ENST00000471996 PUDPQ08623 228 aa16.01■□□□□ 0.15
SORT1-203ENST00000471996 RPS26P11Q5JNZ5 115 aaPredicted RBP16.01■□□□□ 0.15
SORT1-203ENST00000471996 TMEM53Q6P2H8 277 aa16.01■□□□□ 0.15
SORT1-203ENST00000471996 WDR88Q6ZMY6 472 aa16.01■□□□□ 0.15
SORT1-203ENST00000471996 KLHL36Q8N4N3 616 aa16.01■□□□□ 0.15
SORT1-203ENST00000471996 SPICQ8N5J4 248 aa16.01■□□□□ 0.15
SORT1-203ENST00000471996 OR1J1Q8NGS3 322 aa16.01■□□□□ 0.15
SORT1-203ENST00000471996 OR6S1Q8NH40 331 aa16.01■□□□□ 0.15
SORT1-203ENST00000471996 SLC38A5Q8WUX1 472 aa16.01■□□□□ 0.15
SORT1-203ENST00000471996 APOPT1Q96IL0 206 aa16.01■□□□□ 0.15
SORT1-203ENST00000471996 SH3GL3Q99963 347 aa16.01■□□□□ 0.15
SORT1-203ENST00000471996 LRMDAQ9H2I8 198 aa16.01■□□□□ 0.15
SORT1-203ENST00000471996 RNF121Q9H920 327 aa16.01■□□□□ 0.15
SORT1-203ENST00000471996 TMEM38BQ9NVV0 291 aa16.01■□□□□ 0.15
SORT1-203ENST00000471996 C1RLQ9NZP8 487 aa16.01■□□□□ 0.15
SORT1-203ENST00000471996 SLC17A7Q9P2U7 560 aa16.01■□□□□ 0.15
SORT1-203ENST00000471996 IFT52Q9Y366 437 aa16.01■□□□□ 0.15
SORT1-203ENST00000471996 ADH4P08319 380 aa16■□□□□ 0.15
SORT1-203ENST00000471996 SELEP16581 610 aa16■□□□□ 0.15
SORT1-203ENST00000471996 CD80P33681 288 aa16■□□□□ 0.15
SORT1-203ENST00000471996 MVDP53602 400 aa16■□□□□ 0.15
SORT1-203ENST00000471996 TMEM155Q4W5P6 130 aa16■□□□□ 0.15
SORT1-203ENST00000471996 PXKQ7Z7A4 578 aa16■□□□□ 0.15
SORT1-203ENST00000471996 DPPA2Q7Z7J5 298 aa16■□□□□ 0.15
SORT1-203ENST00000471996 TMEM54Q969K7 222 aa16■□□□□ 0.15
SORT1-203ENST00000471996 DCLRE1CQ96SD1 692 aaKnown RBP16■□□□□ 0.15
SORT1-203ENST00000471996 ASPNQ9BXN1 380 aa16■□□□□ 0.15
SORT1-203ENST00000471996 PRDM13Q9H4Q3 707 aa16■□□□□ 0.15
SORT1-203ENST00000471996 PPCSQ9HAB8 311 aa16■□□□□ 0.15
SORT1-203ENST00000471996 CACYBPQ9HB71 228 aaKnown RBP16■□□□□ 0.15
SORT1-203ENST00000471996 DCAF16Q9NXF7 216 aa16■□□□□ 0.15
SORT1-203ENST00000471996 GLTPQ9NZD2 209 aa16■□□□□ 0.15
SORT1-203ENST00000471996 A0A0G2JPF8 293 aa15.99■□□□□ 0.15
SORT1-203ENST00000471996 PLSCR5A0PG75 271 aa15.99■□□□□ 0.15
SORT1-203ENST00000471996 ZSCAN5BA6NJL1 495 aa15.99■□□□□ 0.15
SORT1-203ENST00000471996 SLC22A31A6NKX4 558 aa15.99■□□□□ 0.15
SORT1-203ENST00000471996 HNRNPCL2B2RXH8 293 aa15.99■□□□□ 0.15
SORT1-203ENST00000471996 SRRM5B3KS81 715 aa15.99■□□□□ 0.15
SORT1-203ENST00000471996 HNRNPCL3B7ZW38 293 aa15.99■□□□□ 0.15
SORT1-203ENST00000471996 HNRNPCL1O60812 293 aaKnown RBP15.99■□□□□ 0.15
SORT1-203ENST00000471996 FARS2O95363 451 aaKnown RBP15.99■□□□□ 0.15
SORT1-203ENST00000471996 BGLAPP02818 100 aa15.99■□□□□ 0.15
SORT1-203ENST00000471996 HNRNPCL4P0DMR1 293 aa15.99■□□□□ 0.15
SORT1-203ENST00000471996 ETFAP13804 333 aa15.99■□□□□ 0.15
SORT1-203ENST00000471996 HNRNPA0Q13151 305 aaKnown RBP15.99■□□□□ 0.15
SORT1-203ENST00000471996 TAF9Q16594 264 aa15.99■□□□□ 0.15
SORT1-203ENST00000471996 SPRNQ5BIV9 151 aa15.99■□□□□ 0.15
SORT1-203ENST00000471996 TMEM255AQ5JRV8 349 aa15.99■□□□□ 0.15
SORT1-203ENST00000471996 FIP1L1Q6UN15 594 aaKnown RBP15.99■□□□□ 0.15
SORT1-203ENST00000471996 IFT20Q8IY31 132 aa15.99■□□□□ 0.15
SORT1-203ENST00000471996 LSMEM1Q8N8F7 131 aa15.99■□□□□ 0.15
SORT1-203ENST00000471996 MNS1Q8NEH6 495 aa15.99■□□□□ 0.15
SORT1-203ENST00000471996 EPS8L3Q8TE67 593 aaKnown RBP15.99■□□□□ 0.15
SORT1-203ENST00000471996 GEMIN6Q8WXD5 167 aaKnown RBP15.99■□□□□ 0.15
SORT1-203ENST00000471996 UPRTQ96BW1 309 aa15.99■□□□□ 0.15
SORT1-203ENST00000471996 TEX37Q96LM6 180 aa15.99■□□□□ 0.15
SORT1-203ENST00000471996 MRPL39Q9NYK5 338 aaKnown RBP15.99■□□□□ 0.15
SORT1-203ENST00000471996 OR5V1Q9UGF6 321 aa15.99■□□□□ 0.15
SORT1-203ENST00000471996 IQCMA0A1B0GVH7 501 aa15.98■□□□□ 0.15
SORT1-203ENST00000471996 A0A1B0GWA3 101 aa15.98■□□□□ 0.15
SORT1-203ENST00000471996 F5H0A9 414 aaPredicted RBP15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms