RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 H2AFXP16104 143 aaPredicted RBP19.4■□□□□ 0.7
C9orf3-213ENST00000471978 LSP1P33241 339 aa19.4■□□□□ 0.7
C9orf3-213ENST00000471978 RPS23P62266 143 aaKnown RBP19.4■□□□□ 0.7
C9orf3-213ENST00000471978 FXNQ16595 210 aa19.4■□□□□ 0.7
C9orf3-213ENST00000471978 MMEL1Q495T6 779 aa19.4■□□□□ 0.7
C9orf3-213ENST00000471978 CALHM3Q86XJ0 350 aa19.4■□□□□ 0.7
C9orf3-213ENST00000471978 ZNF584Q8IVC4 421 aa19.4■□□□□ 0.7
C9orf3-213ENST00000471978 OR8J3Q8NGG0 315 aa19.4■□□□□ 0.7
C9orf3-213ENST00000471978 SH3GL3Q99963 347 aa19.4■□□□□ 0.7
C9orf3-213ENST00000471978 MS4A5Q9H3V2 200 aa19.4■□□□□ 0.7
C9orf3-213ENST00000471978 TMEM38BQ9NVV0 291 aa19.4■□□□□ 0.7
C9orf3-213ENST00000471978 BAG5Q9UL15 447 aa19.4■□□□□ 0.7
C9orf3-213ENST00000471978 FZR1Q9UM11 496 aa19.4■□□□□ 0.7
C9orf3-213ENST00000471978 LYNX1G3V0Z9 82 aa19.39■□□□□ 0.69
C9orf3-213ENST00000471978 LILRA1O75019 489 aa19.39■□□□□ 0.69
C9orf3-213ENST00000471978 FARS2O95363 451 aaKnown RBP19.39■□□□□ 0.69
C9orf3-213ENST00000471978 IGHG1P01857 330 aa19.39■□□□□ 0.69
C9orf3-213ENST00000471978 QDPRP09417 244 aa19.39■□□□□ 0.69
C9orf3-213ENST00000471978 LYNX1P0DP58 116 aa19.39■□□□□ 0.69
C9orf3-213ENST00000471978 TNFRSF1BP20333 461 aa19.39■□□□□ 0.69
C9orf3-213ENST00000471978 HNF1AP20823 631 aa19.39■□□□□ 0.69
C9orf3-213ENST00000471978 CLRN1P58418 232 aa19.39■□□□□ 0.69
C9orf3-213ENST00000471978 TAS2R41P59536 307 aa19.39■□□□□ 0.69
C9orf3-213ENST00000471978 RIN1Q13671 783 aa19.39■□□□□ 0.69
C9orf3-213ENST00000471978 LRP11Q86VZ4 500 aa19.39■□□□□ 0.69
C9orf3-213ENST00000471978 SNX18Q96RF0 628 aa19.39■□□□□ 0.69
C9orf3-213ENST00000471978 SLC7A8Q9UHI5 535 aa19.39■□□□□ 0.69
C9orf3-213ENST00000471978 A0A1W2PRG6 482 aa19.38■□□□□ 0.69
C9orf3-213ENST00000471978 FXYD1O00168 92 aa19.38■□□□□ 0.69
C9orf3-213ENST00000471978 NPPAP01160 153 aa19.38■□□□□ 0.69
C9orf3-213ENST00000471978 MT-ND1P03886 318 aa19.38■□□□□ 0.69
C9orf3-213ENST00000471978 TCN1P20061 433 aaPredicted RBP19.38■□□□□ 0.69
C9orf3-213ENST00000471978 APEX1P27695 318 aaKnown RBP19.38■□□□□ 0.69
C9orf3-213ENST00000471978 IL2RGP31785 369 aa19.38■□□□□ 0.69
C9orf3-213ENST00000471978 ALDH3B1P43353 468 aa19.38■□□□□ 0.69
C9orf3-213ENST00000471978 RPL18Q07020 188 aaKnown RBP19.38■□□□□ 0.69
C9orf3-213ENST00000471978 COQ5Q5HYK3 327 aa19.38■□□□□ 0.69
C9orf3-213ENST00000471978 DEF8Q6ZN54 512 aa19.38■□□□□ 0.69
C9orf3-213ENST00000471978 NKAIN4Q8IVV8 208 aa19.38■□□□□ 0.69
C9orf3-213ENST00000471978 OR4K5Q8NGD3 323 aa19.38■□□□□ 0.69
C9orf3-213ENST00000471978 PFN4Q8NHR9 129 aa19.38■□□□□ 0.69
C9orf3-213ENST00000471978 HPS1Q92902 700 aa19.38■□□□□ 0.69
C9orf3-213ENST00000471978 MRGBPQ9NV56 204 aa19.38■□□□□ 0.69
C9orf3-213ENST00000471978 MCIDASD6RGH6 385 aa19.37■□□□□ 0.69
C9orf3-213ENST00000471978 MRASO14807 208 aa19.37■□□□□ 0.69
C9orf3-213ENST00000471978 SHOX2O60902 331 aaPredicted RBP19.37■□□□□ 0.69
C9orf3-213ENST00000471978 SASH3O75995 380 aa19.37■□□□□ 0.69
C9orf3-213ENST00000471978 F13BP05160 661 aa19.37■□□□□ 0.69
C9orf3-213ENST00000471978 TROVE2P10155 538 aaKnown RBP eCLIP19.37■□□□□ 0.693e-7■■□□□ 13.3
C9orf3-213ENST00000471978 FUT1P19526 365 aa19.37■□□□□ 0.69
C9orf3-213ENST00000471978 THBS2P35442 1172 aa19.37■□□□□ 0.69
C9orf3-213ENST00000471978 RBM34P42696 430 aaKnown RBP19.37■□□□□ 0.69
C9orf3-213ENST00000471978 SEC24CP53992 1094 aa19.37■□□□□ 0.69
C9orf3-213ENST00000471978 UGT2B15P54855 530 aa19.37■□□□□ 0.69
C9orf3-213ENST00000471978 RUNX1T1Q06455 604 aa19.37■□□□□ 0.69
C9orf3-213ENST00000471978 KLF10Q13118 480 aa19.37■□□□□ 0.69
C9orf3-213ENST00000471978 TRIP10Q15642 601 aa19.37■□□□□ 0.69
C9orf3-213ENST00000471978 REP15Q6BDI9 236 aa19.37■□□□□ 0.69
C9orf3-213ENST00000471978 TMEM53Q6P2H8 277 aa19.37■□□□□ 0.69
C9orf3-213ENST00000471978 ERICH5Q6P6B1 374 aa19.37■□□□□ 0.69
C9orf3-213ENST00000471978 SLC30A7Q8NEW0 376 aa19.37■□□□□ 0.69
C9orf3-213ENST00000471978 TMEM255BQ8WV15 326 aa19.37■□□□□ 0.69
C9orf3-213ENST00000471978 MCHR2Q969V1 340 aa19.37■□□□□ 0.69
C9orf3-213ENST00000471978 ZNF583Q96ND8 569 aa19.37■□□□□ 0.69
C9orf3-213ENST00000471978 ZNF347Q96SE7 839 aa19.37■□□□□ 0.69
C9orf3-213ENST00000471978 POLR2J2Q9GZM3 115 aaKnown RBP19.37■□□□□ 0.69
C9orf3-213ENST00000471978 POLR2J3Q9H1A7 115 aaKnown RBP19.37■□□□□ 0.69
C9orf3-213ENST00000471978 RNF121Q9H920 327 aa19.37■□□□□ 0.69
C9orf3-213ENST00000471978 MYEF2Q9P2K5 600 aaKnown RBP19.37■□□□□ 0.69
C9orf3-213ENST00000471978 DUSP13Q9UII6 198 aa19.37■□□□□ 0.69
C9orf3-213ENST00000471978 RIMS3Q9UJD0 308 aa19.37■□□□□ 0.69
C9orf3-213ENST00000471978 BBIP1A8MTZ0 92 aa19.36■□□□□ 0.69
C9orf3-213ENST00000471978 OR7A10O76100 309 aa19.36■□□□□ 0.69
C9orf3-213ENST00000471978 OR5F1O95221 314 aa19.36■□□□□ 0.69
C9orf3-213ENST00000471978 IFNA14P01570 189 aa19.36■□□□□ 0.69
C9orf3-213ENST00000471978 OR1E2P47887 323 aa19.36■□□□□ 0.69
C9orf3-213ENST00000471978 ARFIP2P53365 341 aa19.36■□□□□ 0.69
C9orf3-213ENST00000471978 MYBPC1Q00872 1141 aa19.36■□□□□ 0.69
C9orf3-213ENST00000471978 SF3A3Q12874 501 aaKnown RBP eCLIP19.36■□□□□ 0.693e-7■■■■□ 26.1
C9orf3-213ENST00000471978 PIN1Q13526 163 aaPredicted RBP19.36■□□□□ 0.69
C9orf3-213ENST00000471978 MAD2L1BPQ15013 274 aaPredicted RBP19.36■□□□□ 0.69
C9orf3-213ENST00000471978 HIST3H3Q16695 136 aa19.36■□□□□ 0.69
C9orf3-213ENST00000471978 SLC36A2Q495M3 483 aa19.36■□□□□ 0.69
C9orf3-213ENST00000471978 ELFN2Q5R3F8 820 aa19.36■□□□□ 0.69
C9orf3-213ENST00000471978 SLC16A14Q7RTX9 510 aa19.36■□□□□ 0.69
C9orf3-213ENST00000471978 DPPA2Q7Z7J5 298 aa19.36■□□□□ 0.69
C9orf3-213ENST00000471978 SYT14Q8NB59 555 aa19.36■□□□□ 0.69
C9orf3-213ENST00000471978 C10orf82Q8WW14 230 aa19.36■□□□□ 0.69
C9orf3-213ENST00000471978 TMEM239Q8WW34 195 aa19.36■□□□□ 0.69
C9orf3-213ENST00000471978 SGTBQ96EQ0 304 aa19.36■□□□□ 0.69
C9orf3-213ENST00000471978 C20orf141Q9NUB4 165 aa19.36■□□□□ 0.69
C9orf3-213ENST00000471978 A0A1W2PPW3 197 aa19.35■□□□□ 0.69
C9orf3-213ENST00000471978 HPXP02790 462 aa19.35■□□□□ 0.69
C9orf3-213ENST00000471978 CCL2P13500 99 aa19.35■□□□□ 0.69
C9orf3-213ENST00000471978 AQP2P41181 271 aa19.35■□□□□ 0.69
C9orf3-213ENST00000471978 DAP3P51398 398 aaKnown RBP19.35■□□□□ 0.69
C9orf3-213ENST00000471978 ZNF84P51523 738 aa19.35■□□□□ 0.69
C9orf3-213ENST00000471978 MAPRE2Q15555 327 aa19.35■□□□□ 0.69
C9orf3-213ENST00000471978 CR1LQ2VPA4 569 aa19.35■□□□□ 0.69
C9orf3-213ENST00000471978 PAQR4Q8N4S7 273 aaPredicted RBP19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms