RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 RHOXF1Q8NHV9 184 aa4.94□□□□□ -1.62
SMC5-202ENST00000471372 CD300LFQ8TDQ1 290 aa4.94□□□□□ -1.62
SMC5-202ENST00000471372 TMIGD2Q96BF3 282 aa4.94□□□□□ -1.62
SMC5-202ENST00000471372 C19orf60Q96EN9 201 aa4.94□□□□□ -1.62
SMC5-202ENST00000471372 JSRP1Q96MG2 331 aaPredicted RBP4.94□□□□□ -1.62
SMC5-202ENST00000471372 OPALINQ96PE5 141 aa4.94□□□□□ -1.62
SMC5-202ENST00000471372 ARHGDIGQ99819 225 aa4.94□□□□□ -1.62
SMC5-202ENST00000471372 IL26Q9NPH9 171 aa4.94□□□□□ -1.62
SMC5-202ENST00000471372 AGPAT4Q9NRZ5 378 aa4.94□□□□□ -1.62
SMC5-202ENST00000471372 AIG1Q9NVV5 245 aa4.94□□□□□ -1.62
SMC5-202ENST00000471372 GNPTGQ9UJJ9 305 aa4.94□□□□□ -1.62
SMC5-202ENST00000471372 AKNAQ7Z591 1439 aa4.94□□□□□ -1.62
SMC5-202ENST00000471372 IGKV3D-15A0A087WSY6 115 aa4.93□□□□□ -1.62
SMC5-202ENST00000471372 A0A0J9YYE9 177 aa4.93□□□□□ -1.62
SMC5-202ENST00000471372 TMEM120BA0PK00 339 aa4.93□□□□□ -1.62
SMC5-202ENST00000471372 F6UB75 175 aa4.93□□□□□ -1.62
SMC5-202ENST00000471372 TRBC1P01850 177 aa4.93□□□□□ -1.62
SMC5-202ENST00000471372 IVLP07476 585 aa4.93□□□□□ -1.62
SMC5-202ENST00000471372 RHOXF2BP0C7M4 288 aa4.93□□□□□ -1.62
SMC5-202ENST00000471372 ZNF250P15622 560 aa4.93□□□□□ -1.62
SMC5-202ENST00000471372 CTRB1P17538 263 aa4.93□□□□□ -1.62
SMC5-202ENST00000471372 CMA1P23946 247 aa4.93□□□□□ -1.62
SMC5-202ENST00000471372 RORCP51449 518 aa4.93□□□□□ -1.62
SMC5-202ENST00000471372 DLX1P56177 255 aa4.93□□□□□ -1.62
SMC5-202ENST00000471372 RPS15AP62244 130 aaKnown RBP4.93□□□□□ -1.62
SMC5-202ENST00000471372 ADARB1P78563 741 aaKnown RBP4.93□□□□□ -1.62
SMC5-202ENST00000471372 DMTNQ08495 405 aa4.93□□□□□ -1.62
SMC5-202ENST00000471372 FCN2Q15485 313 aa4.93□□□□□ -1.62
SMC5-202ENST00000471372 HIGD2BQ4VC39 106 aa4.93□□□□□ -1.62
SMC5-202ENST00000471372 ATAD3CQ5T2N8 411 aa4.93□□□□□ -1.62
SMC5-202ENST00000471372 CTRB2Q6GPI1 263 aa4.93□□□□□ -1.62
SMC5-202ENST00000471372 SLC25A25Q6KCM7 469 aa4.93□□□□□ -1.62
SMC5-202ENST00000471372 H3F3CQ6NXT2 135 aa4.93□□□□□ -1.62
SMC5-202ENST00000471372 TFAP2EQ6VUC0 442 aa4.93□□□□□ -1.62
SMC5-202ENST00000471372 Q6ZTC4 211 aa4.93□□□□□ -1.62
SMC5-202ENST00000471372 MRPL21Q7Z2W9 205 aaKnown RBP4.93□□□□□ -1.62
SMC5-202ENST00000471372 THOC6Q86W42 341 aaKnown RBP4.93□□□□□ -1.62
SMC5-202ENST00000471372 NKAPP1Q8N9T2 125 aa4.93□□□□□ -1.62
SMC5-202ENST00000471372 OR2L2Q8NH16 312 aa4.93□□□□□ -1.62
SMC5-202ENST00000471372 TYMSOSQ8TAI1 123 aa4.93□□□□□ -1.62
SMC5-202ENST00000471372 ARPC1AQ92747 370 aa4.93□□□□□ -1.62
SMC5-202ENST00000471372 FRAT1Q92837 279 aaPredicted RBP4.93□□□□□ -1.62
SMC5-202ENST00000471372 EBF4Q9BQW3 602 aa4.93□□□□□ -1.62
SMC5-202ENST00000471372 RHOXF2Q9BQY4 288 aa4.93□□□□□ -1.62
SMC5-202ENST00000471372 RIOK2Q9BVS4 552 aaKnown RBP4.93□□□□□ -1.62
SMC5-202ENST00000471372 DEFB126Q9BYW3 111 aa4.93□□□□□ -1.62
SMC5-202ENST00000471372 NXF3Q9H4D5 531 aaKnown RBP4.93□□□□□ -1.62
SMC5-202ENST00000471372 DYRK4Q9NR20 520 aa4.93□□□□□ -1.62
SMC5-202ENST00000471372 EXD2Q9NVH0 621 aa4.93□□□□□ -1.62
SMC5-202ENST00000471372 CD274Q9NZQ7 290 aa4.93□□□□□ -1.62
SMC5-202ENST00000471372 CCDC59Q9P031 241 aaKnown RBP4.93□□□□□ -1.62
SMC5-202ENST00000471372 LGALS13Q9UHV8 139 aa4.93□□□□□ -1.62
SMC5-202ENST00000471372 BTNL2Q9UIR0 455 aa4.93□□□□□ -1.62
SMC5-202ENST00000471372 BZW2Q9Y6E2 419 aaKnown RBP4.93□□□□□ -1.62
SMC5-202ENST00000471372 IGKV1D-13A0A0B4J2D9 117 aa4.92□□□□□ -1.62
SMC5-202ENST00000471372 A0A1B0GW55 424 aa4.92□□□□□ -1.62
SMC5-202ENST00000471372 CHMP2AO43633 222 aa4.92□□□□□ -1.62
SMC5-202ENST00000471372 CLDN11O75508 207 aa4.92□□□□□ -1.62
SMC5-202ENST00000471372 SERF1AO75920 110 aa4.92□□□□□ -1.62
SMC5-202ENST00000471372 TIMP1P01033 207 aa4.92□□□□□ -1.62
SMC5-202ENST00000471372 THY1P04216 161 aa4.92□□□□□ -1.62
SMC5-202ENST00000471372 CLTAP09496 248 aa4.92□□□□□ -1.62
SMC5-202ENST00000471372 DUX4L2P0CJ85 424 aa4.92□□□□□ -1.62
SMC5-202ENST00000471372 DUX4L3P0CJ86 424 aa4.92□□□□□ -1.62
SMC5-202ENST00000471372 DUX4L4P0CJ87 422 aa4.92□□□□□ -1.62
SMC5-202ENST00000471372 DUX4L5P0CJ88 424 aa4.92□□□□□ -1.62
SMC5-202ENST00000471372 DUX4L6P0CJ89 424 aa4.92□□□□□ -1.62
SMC5-202ENST00000471372 DUX4L7P0CJ90 424 aa4.92□□□□□ -1.62
SMC5-202ENST00000471372 IGKV1-13P0DP09 117 aa4.92□□□□□ -1.62
SMC5-202ENST00000471372 MEOX2P50222 304 aa4.92□□□□□ -1.62
SMC5-202ENST00000471372 SUB1P53999 127 aaKnown RBP eCLIP4.92□□□□□ -1.62
SMC5-202ENST00000471372 DIO3P55073 304 aa4.92□□□□□ -1.62
SMC5-202ENST00000471372 ZNF92Q03936 586 aa4.92□□□□□ -1.62
SMC5-202ENST00000471372 TRAM2Q15035 370 aa4.92□□□□□ -1.62
SMC5-202ENST00000471372 CYTH1Q15438 398 aa4.92□□□□□ -1.62
SMC5-202ENST00000471372 DUX4L9Q6RFH8 374 aaPredicted RBP4.92□□□□□ -1.62
SMC5-202ENST00000471372 SPESP1Q6UW49 350 aa4.92□□□□□ -1.62
SMC5-202ENST00000471372 RFLNAQ6ZTI6 216 aa4.92□□□□□ -1.62
SMC5-202ENST00000471372 FBXO16Q8IX29 292 aaPredicted RBP4.92□□□□□ -1.62
SMC5-202ENST00000471372 MAPK1IP1LQ8NDC0 245 aa4.92□□□□□ -1.62
SMC5-202ENST00000471372 OR5K2Q8NHB8 316 aa4.92□□□□□ -1.62
SMC5-202ENST00000471372 NUBPLQ8TB37 319 aa4.92□□□□□ -1.62
SMC5-202ENST00000471372 NAT6Q93015 286 aa4.92□□□□□ -1.62
SMC5-202ENST00000471372 TMEM54Q969K7 222 aa4.92□□□□□ -1.62
SMC5-202ENST00000471372 RPUSD4Q96CM3 377 aaKnown RBP4.92□□□□□ -1.62
SMC5-202ENST00000471372 ATOH8Q96SQ7 321 aa4.92□□□□□ -1.62
SMC5-202ENST00000471372 ECSITQ9BQ95 431 aa4.92□□□□□ -1.62
SMC5-202ENST00000471372 ZYG11BQ9C0D3 744 aa4.92□□□□□ -1.62
SMC5-202ENST00000471372 POLR2J2Q9GZM3 115 aaKnown RBP4.92□□□□□ -1.62
SMC5-202ENST00000471372 POLR2J3Q9H1A7 115 aaKnown RBP4.92□□□□□ -1.62
SMC5-202ENST00000471372 PIGUQ9H490 435 aa4.92□□□□□ -1.62
SMC5-202ENST00000471372 NTN4Q9HB63 628 aa4.92□□□□□ -1.62
SMC5-202ENST00000471372 ACP6Q9NPH0 428 aa4.92□□□□□ -1.62
SMC5-202ENST00000471372 PRSS16Q9NQE7 514 aa4.92□□□□□ -1.62
SMC5-202ENST00000471372 STOX2Q9P2F5 926 aaPredicted RBP4.92□□□□□ -1.62
SMC5-202ENST00000471372 CLCF1Q9UBD9 225 aa4.92□□□□□ -1.62
SMC5-202ENST00000471372 DUX4Q9UBX2 424 aa4.92□□□□□ -1.62
SMC5-202ENST00000471372 MOKQ9UQ07 419 aa4.92□□□□□ -1.62
SMC5-202ENST00000471372 GOLT1BQ9Y3E0 138 aa4.92□□□□□ -1.62
SMC5-202ENST00000471372 HCFC1P51610 2035 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms