RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 ZNF511Q8NB15 262 aa8.38□□□□□ -1.07
VPS52-216ENST00000471309 KBTBD8Q8NFY9 601 aa8.38□□□□□ -1.07
VPS52-216ENST00000471309 OR6X1Q8NH79 312 aa8.38□□□□□ -1.07
VPS52-216ENST00000471309 OR2V1Q8NHB1 315 aa8.38□□□□□ -1.07
VPS52-216ENST00000471309 SNIP1Q8TAD8 396 aaKnown RBP8.38□□□□□ -1.07
VPS52-216ENST00000471309 NDNFQ8TB73 568 aa8.38□□□□□ -1.07
VPS52-216ENST00000471309 FNDC8Q8TC99 324 aa8.38□□□□□ -1.07
VPS52-216ENST00000471309 TXNDC15Q96J42 360 aa8.38□□□□□ -1.07
VPS52-216ENST00000471309 INTS14Q96SY0 518 aa8.38□□□□□ -1.07
VPS52-216ENST00000471309 CHCHD6Q9BRQ6 235 aa8.38□□□□□ -1.07
VPS52-216ENST00000471309 SF3B5Q9BWJ5 86 aaKnown RBP8.38□□□□□ -1.07
VPS52-216ENST00000471309 MRPL13Q9BYD1 178 aaKnown RBP8.38□□□□□ -1.07
VPS52-216ENST00000471309 SRXN1Q9BYN0 137 aa8.38□□□□□ -1.07
VPS52-216ENST00000471309 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.38□□□□□ -1.07
VPS52-216ENST00000471309 OR51E2Q9H255 320 aa8.38□□□□□ -1.07
VPS52-216ENST00000471309 ISG20L2Q9H9L3 353 aaKnown RBP8.38□□□□□ -1.07
VPS52-216ENST00000471309 ZMIZ1Q9ULJ6 1067 aa8.38□□□□□ -1.07
VPS52-216ENST00000471309 STUB1Q9UNE7 303 aa8.38□□□□□ -1.07
VPS52-216ENST00000471309 COPS3Q9UNS2 423 aa8.38□□□□□ -1.07
VPS52-216ENST00000471309 WASF3Q9UPY6 502 aa8.38□□□□□ -1.07
VPS52-216ENST00000471309 KCNMB2Q9Y691 235 aa8.38□□□□□ -1.07
VPS52-216ENST00000471309 TMEM14AQ9Y6G1 99 aa8.38□□□□□ -1.07
VPS52-216ENST00000471309 AHCTF1Q8WYP5 2266 aa8.38□□□□□ -1.07
VPS52-216ENST00000471309 LOC100506127A0A0U1RQW1 187 aa8.37□□□□□ -1.07
VPS52-216ENST00000471309 FAM166BA8MTA8 275 aa8.37□□□□□ -1.07
VPS52-216ENST00000471309 FAM171A2A8MVW0 826 aa8.37□□□□□ -1.07
VPS52-216ENST00000471309 SMAD9O15198 467 aaKnown RBP8.37□□□□□ -1.07
VPS52-216ENST00000471309 KLK10O43240 276 aa8.37□□□□□ -1.07
VPS52-216ENST00000471309 EFSO43281 561 aa8.37□□□□□ -1.07
VPS52-216ENST00000471309 RAMP1O60894 148 aa8.37□□□□□ -1.07
VPS52-216ENST00000471309 GPX5O75715 221 aa8.37□□□□□ -1.07
VPS52-216ENST00000471309 IGHG1P01857 330 aa8.37□□□□□ -1.07
VPS52-216ENST00000471309 CELA3AP09093 270 aa8.37□□□□□ -1.07
VPS52-216ENST00000471309 CD53P19397 219 aa8.37□□□□□ -1.07
VPS52-216ENST00000471309 KLK2P20151 261 aa8.37□□□□□ -1.07
VPS52-216ENST00000471309 GALP22466 123 aa8.37□□□□□ -1.07
VPS52-216ENST00000471309 PTGS2P35354 604 aa8.37□□□□□ -1.07
VPS52-216ENST00000471309 RFC3P40938 356 aa8.37□□□□□ -1.07
VPS52-216ENST00000471309 CCL11P51671 97 aa8.37□□□□□ -1.07
VPS52-216ENST00000471309 LSM3P62310 102 aaKnown RBP8.37□□□□□ -1.07
VPS52-216ENST00000471309 FMODQ06828 376 aa8.37□□□□□ -1.07
VPS52-216ENST00000471309 HIST3H3Q16695 136 aa8.37□□□□□ -1.07
VPS52-216ENST00000471309 PDSS1Q5T2R2 415 aa8.37□□□□□ -1.07
VPS52-216ENST00000471309 ZNF684Q5T5D7 378 aa8.37□□□□□ -1.07
VPS52-216ENST00000471309 ABLIM2Q6H8Q1 611 aa8.37□□□□□ -1.07
VPS52-216ENST00000471309 CD200R1LQ6Q8B3 271 aa8.37□□□□□ -1.07
VPS52-216ENST00000471309 KLBQ86Z14 1044 aa8.37□□□□□ -1.07
VPS52-216ENST00000471309 WDFY1Q8IWB7 410 aa8.37□□□□□ -1.07
VPS52-216ENST00000471309 DYNC2LI1Q8TCX1 351 aa8.37□□□□□ -1.07
VPS52-216ENST00000471309 HAVCR2Q8TDQ0 301 aa8.37□□□□□ -1.07
VPS52-216ENST00000471309 SMAP2Q8WU79 429 aaPredicted RBP8.37□□□□□ -1.07
VPS52-216ENST00000471309 SNX33Q8WV41 574 aa8.37□□□□□ -1.07
VPS52-216ENST00000471309 SLC39A7Q92504 469 aa8.37□□□□□ -1.07
VPS52-216ENST00000471309 CPNE4Q96A23 557 aaPredicted RBP8.37□□□□□ -1.07
VPS52-216ENST00000471309 SLC25A44Q96H78 314 aaPredicted RBP8.37□□□□□ -1.07
VPS52-216ENST00000471309 C4orf36Q96KX1 117 aa8.37□□□□□ -1.07
VPS52-216ENST00000471309 COQ7Q99807 217 aa8.37□□□□□ -1.07
VPS52-216ENST00000471309 CENPOQ9BU64 300 aa8.37□□□□□ -1.07
VPS52-216ENST00000471309 SCNM1Q9BWG6 230 aa8.37□□□□□ -1.07
VPS52-216ENST00000471309 DCSTAMPQ9H295 470 aa8.37□□□□□ -1.07
VPS52-216ENST00000471309 RERGLQ9H628 205 aa8.37□□□□□ -1.07
VPS52-216ENST00000471309 WDR76Q9H967 626 aa8.37□□□□□ -1.07
VPS52-216ENST00000471309 ACKR4Q9NPB9 350 aa8.37□□□□□ -1.07
VPS52-216ENST00000471309 SF3B6Q9Y3B4 125 aaKnown RBP8.37□□□□□ -1.07
VPS52-216ENST00000471309 CACNA1BQ00975 2339 aa8.36□□□□□ -1.07
VPS52-216ENST00000471309 TRAV17A0A0B4J275 112 aa8.36□□□□□ -1.07
VPS52-216ENST00000471309 SLC35F4A4IF30 521 aa8.36□□□□□ -1.07
VPS52-216ENST00000471309 TVP23AA6NH52 213 aa8.36□□□□□ -1.07
VPS52-216ENST00000471309 HSPB2A8KAH6 182 aa8.36□□□□□ -1.07
VPS52-216ENST00000471309 H0YC42 278 aa8.36□□□□□ -1.07
VPS52-216ENST00000471309 J3QLW9 94 aa8.36□□□□□ -1.07
VPS52-216ENST00000471309 PLPP2O43688 288 aa8.36□□□□□ -1.07
VPS52-216ENST00000471309 TLX3O43711 291 aaPredicted RBP8.36□□□□□ -1.07
VPS52-216ENST00000471309 KHDRBS3O75525 346 aaKnown RBP8.36□□□□□ -1.07
VPS52-216ENST00000471309 ACTL6AO96019 429 aa8.36□□□□□ -1.07
VPS52-216ENST00000471309 HRGP04196 525 aa8.36□□□□□ -1.07
VPS52-216ENST00000471309 GAAP10253 952 aa8.36□□□□□ -1.07
VPS52-216ENST00000471309 ZNF708P17019 499 aa8.36□□□□□ -1.07
VPS52-216ENST00000471309 ZNF19P17023 458 aa8.36□□□□□ -1.07
VPS52-216ENST00000471309 CELP19835 753 aa8.36□□□□□ -1.07
VPS52-216ENST00000471309 ENPP1P22413 925 aa8.36□□□□□ -1.07
VPS52-216ENST00000471309 PAX7P23759 505 aa8.36□□□□□ -1.07
VPS52-216ENST00000471309 CRYBB2P43320 205 aa8.36□□□□□ -1.07
VPS52-216ENST00000471309 ID4P47928 161 aa8.36□□□□□ -1.07
VPS52-216ENST00000471309 CD97P48960 835 aa8.36□□□□□ -1.07
VPS52-216ENST00000471309 ENTPD1P49961 510 aa8.36□□□□□ -1.07
VPS52-216ENST00000471309 LHX2P50458 406 aa8.36□□□□□ -1.07
VPS52-216ENST00000471309 HCCSP53701 268 aa8.36□□□□□ -1.07
VPS52-216ENST00000471309 CLDN18P56856 261 aa8.36□□□□□ -1.07
VPS52-216ENST00000471309 CARD18P57730 90 aa8.36□□□□□ -1.07
VPS52-216ENST00000471309 OR12D2P58182 307 aa8.36□□□□□ -1.07
VPS52-216ENST00000471309 CLRN1P58418 232 aa8.36□□□□□ -1.07
VPS52-216ENST00000471309 RPS3AP61247 264 aaKnown RBP8.36□□□□□ -1.07
VPS52-216ENST00000471309 RPS25P62851 125 aaKnown RBP8.36□□□□□ -1.07
VPS52-216ENST00000471309 TUBA1BP68363 451 aa8.36□□□□□ -1.07
VPS52-216ENST00000471309 EGR3Q06889 387 aa8.36□□□□□ -1.07
VPS52-216ENST00000471309 MRPL28Q13084 256 aaKnown RBP8.36□□□□□ -1.07
VPS52-216ENST00000471309 SLC17A1Q14916 467 aa8.36□□□□□ -1.07
VPS52-216ENST00000471309 HSPB2Q16082 182 aa8.36□□□□□ -1.07
VPS52-216ENST00000471309 BCL2A1Q16548 175 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms