RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 CHID1Q9BWS9 393 aa11.79□□□□□ -0.52
HMGN1-211ENST00000471260 C1QTNF6Q9BXI9 259 aa11.79□□□□□ -0.52
HMGN1-211ENST00000471260 CACNG6Q9BXT2 260 aa11.79□□□□□ -0.52
HMGN1-211ENST00000471260 REG4Q9BYZ8 158 aa11.79□□□□□ -0.52
HMGN1-211ENST00000471260 B3GAT1Q9P2W7 334 aa11.79□□□□□ -0.52
HMGN1-211ENST00000471260 CRNNQ9UBG3 495 aaPredicted RBP11.79□□□□□ -0.52
HMGN1-211ENST00000471260 ATP23Q9Y6H3 246 aa11.79□□□□□ -0.52
HMGN1-211ENST00000471260 FN1P02751 2386 aaKnown RBP11.78□□□□□ -0.52
HMGN1-211ENST00000471260 ABCA2Q9BZC7 2435 aa11.78□□□□□ -0.52
HMGN1-211ENST00000471260 IGKV1D-42A0A075B6H8 117 aa11.78□□□□□ -0.52
HMGN1-211ENST00000471260 ELOVL7A1L3X0 281 aa11.78□□□□□ -0.52
HMGN1-211ENST00000471260 H7C417 338 aa11.78□□□□□ -0.52
HMGN1-211ENST00000471260 M0R082 166 aa11.78□□□□□ -0.52
HMGN1-211ENST00000471260 UPK3AO75631 287 aa11.78□□□□□ -0.52
HMGN1-211ENST00000471260 ALPLP05186 524 aa11.78□□□□□ -0.52
HMGN1-211ENST00000471260 GRPRP30550 384 aa11.78□□□□□ -0.52
HMGN1-211ENST00000471260 HIKESHIQ53FT3 197 aa11.78□□□□□ -0.52
HMGN1-211ENST00000471260 ZNF613Q6PF04 617 aa11.78□□□□□ -0.52
HMGN1-211ENST00000471260 B3GLCTQ6Y288 498 aa11.78□□□□□ -0.52
HMGN1-211ENST00000471260 COMTD1Q86VU5 262 aa11.78□□□□□ -0.52
HMGN1-211ENST00000471260 PTOV1Q86YD1 416 aa11.78□□□□□ -0.52
HMGN1-211ENST00000471260 ZDHHC13Q8IUH4 622 aa11.78□□□□□ -0.52
HMGN1-211ENST00000471260 CCDC36Q8IYA8 594 aa11.78□□□□□ -0.52
HMGN1-211ENST00000471260 MICU2Q8IYU8 434 aa11.78□□□□□ -0.52
HMGN1-211ENST00000471260 KDM8Q8N371 416 aa11.78□□□□□ -0.52
HMGN1-211ENST00000471260 PIK3C3Q8NEB9 887 aa11.78□□□□□ -0.52
HMGN1-211ENST00000471260 ZNF417Q8TAU3 575 aa11.78□□□□□ -0.52
HMGN1-211ENST00000471260 RASSF5Q8WWW0 418 aa11.78□□□□□ -0.52
HMGN1-211ENST00000471260 HDAC2Q92769 488 aaKnown RBP11.78□□□□□ -0.52
HMGN1-211ENST00000471260 BCL2L2Q92843 193 aaPredicted RBP11.78□□□□□ -0.52
HMGN1-211ENST00000471260 ISOC1Q96CN7 298 aa11.78□□□□□ -0.52
HMGN1-211ENST00000471260 LRR1Q96L50 414 aa11.78□□□□□ -0.52
HMGN1-211ENST00000471260 ALKBH3Q96Q83 286 aaPredicted RBP11.78□□□□□ -0.52
HMGN1-211ENST00000471260 SLC38A2Q96QD8 506 aa11.78□□□□□ -0.52
HMGN1-211ENST00000471260 ZNF587Q96SQ5 575 aaPredicted RBP11.78□□□□□ -0.52
HMGN1-211ENST00000471260 KCNS3Q9BQ31 491 aa11.78□□□□□ -0.52
HMGN1-211ENST00000471260 RHNO1Q9BSD3 238 aa11.78□□□□□ -0.52
HMGN1-211ENST00000471260 KATNB1Q9BVA0 655 aa11.78□□□□□ -0.52
HMGN1-211ENST00000471260 ASPNQ9BXN1 380 aa11.78□□□□□ -0.52
HMGN1-211ENST00000471260 GABARAPL1Q9H0R8 117 aa11.78□□□□□ -0.52
HMGN1-211ENST00000471260 KAT8Q9H7Z6 458 aaKnown RBP11.78□□□□□ -0.52
HMGN1-211ENST00000471260 GMPR2Q9P2T1 348 aaKnown RBP11.78□□□□□ -0.52
HMGN1-211ENST00000471260 GDF2Q9UK05 429 aaPredicted RBP11.78□□□□□ -0.52
HMGN1-211ENST00000471260 PMF1-BGLAPU3KQ54 211 aa11.78□□□□□ -0.52
HMGN1-211ENST00000471260 NSD1Q96L73 2696 aaPredicted RBP11.78□□□□□ -0.52
HMGN1-211ENST00000471260 RNF223E7ERA6 249 aa11.77□□□□□ -0.53
HMGN1-211ENST00000471260 M0QX08 132 aa11.77□□□□□ -0.53
HMGN1-211ENST00000471260 GSTA4O15217 222 aa11.77□□□□□ -0.53
HMGN1-211ENST00000471260 TPST2O60704 377 aa11.77□□□□□ -0.53
HMGN1-211ENST00000471260 NDUFS7O75251 213 aa11.77□□□□□ -0.53
HMGN1-211ENST00000471260 MT-ATP6P00846 226 aa11.77□□□□□ -0.53
HMGN1-211ENST00000471260 CRYAAP02489 173 aa11.77□□□□□ -0.53
HMGN1-211ENST00000471260 AQP1P29972 269 aa11.77□□□□□ -0.53
HMGN1-211ENST00000471260 CDH12P55289 794 aa11.77□□□□□ -0.53
HMGN1-211ENST00000471260 MTPNP58546 118 aa11.77□□□□□ -0.53
HMGN1-211ENST00000471260 DUSP7Q16829 419 aa11.77□□□□□ -0.53
HMGN1-211ENST00000471260 ERICH5Q6P6B1 374 aa11.77□□□□□ -0.53
HMGN1-211ENST00000471260 LINGO2Q7L985 606 aa11.77□□□□□ -0.53
HMGN1-211ENST00000471260 CALHM3Q86XJ0 350 aa11.77□□□□□ -0.53
HMGN1-211ENST00000471260 UEVLDQ8IX04 471 aa11.77□□□□□ -0.53
HMGN1-211ENST00000471260 C8orf59Q8N0T1 100 aaPredicted RBP11.77□□□□□ -0.53
HMGN1-211ENST00000471260 GPR137CQ8N3F9 429 aa11.77□□□□□ -0.53
HMGN1-211ENST00000471260 ZNF583Q96ND8 569 aa11.77□□□□□ -0.53
HMGN1-211ENST00000471260 PALMDQ9NP74 551 aa11.77□□□□□ -0.53
HMGN1-211ENST00000471260 MRPL39Q9NYK5 338 aaKnown RBP11.77□□□□□ -0.53
HMGN1-211ENST00000471260 FBXO9Q9UK97 447 aaPredicted RBP11.77□□□□□ -0.53
HMGN1-211ENST00000471260 MOKQ9UQ07 419 aa11.77□□□□□ -0.53
HMGN1-211ENST00000471260 NOX1Q9Y5S8 564 aa11.77□□□□□ -0.53
HMGN1-211ENST00000471260 TLN2Q9Y4G6 2542 aa11.76□□□□□ -0.53
HMGN1-211ENST00000471260 IGHV1-18A0A0C4DH31 117 aa11.76□□□□□ -0.53
HMGN1-211ENST00000471260 MS4A18H0YCH9 400 aa11.76□□□□□ -0.53
HMGN1-211ENST00000471260 H3BSA7 217 aa11.76□□□□□ -0.53
HMGN1-211ENST00000471260 CHP2O43745 196 aa11.76□□□□□ -0.53
HMGN1-211ENST00000471260 SSX4O60224 188 aa11.76□□□□□ -0.53
HMGN1-211ENST00000471260 MRPS14O60783 128 aaKnown RBP11.76□□□□□ -0.53
HMGN1-211ENST00000471260 IGKV3-15P01624 115 aa11.76□□□□□ -0.53
HMGN1-211ENST00000471260 IGLV1-44P01699 117 aa11.76□□□□□ -0.53
HMGN1-211ENST00000471260 BGLAPP02818 100 aa11.76□□□□□ -0.53
HMGN1-211ENST00000471260 TP53P04637 393 aaPredicted RBP11.76□□□□□ -0.53
HMGN1-211ENST00000471260 NCK1P16333 377 aa11.76□□□□□ -0.53
HMGN1-211ENST00000471260 NUDT6P53370 316 aa11.76□□□□□ -0.53
HMGN1-211ENST00000471260 RAD23AP54725 363 aa11.76□□□□□ -0.53
HMGN1-211ENST00000471260 TMBIM6P55061 237 aa11.76□□□□□ -0.53
HMGN1-211ENST00000471260 LGALS3BPQ08380 585 aa11.76□□□□□ -0.53
HMGN1-211ENST00000471260 PUDPQ08623 228 aa11.76□□□□□ -0.53
HMGN1-211ENST00000471260 MS4A18Q3C1V0 323 aa11.76□□□□□ -0.53
HMGN1-211ENST00000471260 CLEC2AQ6UVW9 174 aa11.76□□□□□ -0.53
HMGN1-211ENST00000471260 LINC00114Q6XXX2 140 aa11.76□□□□□ -0.53
HMGN1-211ENST00000471260 LINC00299Q6ZSB3 139 aa11.76□□□□□ -0.53
HMGN1-211ENST00000471260 THAP5Q7Z6K1 395 aa11.76□□□□□ -0.53
HMGN1-211ENST00000471260 LSRQ86X29 649 aaPredicted RBP11.76□□□□□ -0.53
HMGN1-211ENST00000471260 HIPK1Q86Z02 1210 aa11.76□□□□□ -0.53
HMGN1-211ENST00000471260 SMYD1Q8NB12 490 aa11.76□□□□□ -0.53
HMGN1-211ENST00000471260 ZNF555Q8NEP9 628 aa11.76□□□□□ -0.53
HMGN1-211ENST00000471260 OR10H5Q8NGA6 315 aa11.76□□□□□ -0.53
HMGN1-211ENST00000471260 OR5K1Q8NHB7 308 aa11.76□□□□□ -0.53
HMGN1-211ENST00000471260 RNF217Q8TC41 542 aa11.76□□□□□ -0.53
HMGN1-211ENST00000471260 ZNF566Q969W8 418 aa11.76□□□□□ -0.53
HMGN1-211ENST00000471260 OR2M2Q96R28 347 aa11.76□□□□□ -0.53
HMGN1-211ENST00000471260 MCHR1Q99705 422 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms