RNA–Protein interactions for RNA: ENST00000470338.1

TOP3B-215, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-215ENST00000470338 ITGA2P17301 1181 aa12.29□□□□□ -0.44
TOP3B-215ENST00000470338 APOBEC3AP31941 199 aaPredicted RBP12.29□□□□□ -0.44
TOP3B-215ENST00000470338 CDKN1AP38936 164 aa12.29□□□□□ -0.44
TOP3B-215ENST00000470338 FABP6P51161 128 aa12.29□□□□□ -0.44
TOP3B-215ENST00000470338 ATP5J2P56134 94 aa12.29□□□□□ -0.44
TOP3B-215ENST00000470338 CLRN1P58418 232 aa12.29□□□□□ -0.44
TOP3B-215ENST00000470338 RRM2BQ7LG56 351 aa12.29□□□□□ -0.44
TOP3B-215ENST00000470338 OAFQ86UD1 273 aa12.29□□□□□ -0.44
TOP3B-215ENST00000470338 MYPOPQ86VE0 399 aaPredicted RBP12.29□□□□□ -0.44
TOP3B-215ENST00000470338 FBXL14Q8N1E6 418 aa12.29□□□□□ -0.44
TOP3B-215ENST00000470338 MUC15Q8N387 334 aa12.29□□□□□ -0.44
TOP3B-215ENST00000470338 NOXO1Q8NFA2 376 aa12.29□□□□□ -0.44
TOP3B-215ENST00000470338 OR51A7Q8NH64 312 aa12.29□□□□□ -0.44
TOP3B-215ENST00000470338 MCHR2Q969V1 340 aa12.29□□□□□ -0.44
TOP3B-215ENST00000470338 NMD3Q96D46 503 aaKnown RBP12.29□□□□□ -0.44
TOP3B-215ENST00000470338 TRMT61AQ96FX7 289 aaKnown RBP12.29□□□□□ -0.44
TOP3B-215ENST00000470338 ZNF347Q96SE7 839 aa12.29□□□□□ -0.44
TOP3B-215ENST00000470338 FUZQ9BT04 418 aa12.29□□□□□ -0.44
TOP3B-215ENST00000470338 SEC61A2Q9H9S3 476 aa12.29□□□□□ -0.44
TOP3B-215ENST00000470338 CBLN4Q9NTU7 201 aa12.29□□□□□ -0.44
TOP3B-215ENST00000470338 TMEM38BQ9NVV0 291 aa12.29□□□□□ -0.44
TOP3B-215ENST00000470338 ACTR3BQ9P1U1 418 aa12.29□□□□□ -0.44
TOP3B-215ENST00000470338 TMEM5Q9Y2B1 443 aa12.29□□□□□ -0.44
TOP3B-215ENST00000470338 TRAV27A0A087WT01 109 aa12.28□□□□□ -0.44
TOP3B-215ENST00000470338 TRBV4-1A0A0J9YWV2 114 aa12.28□□□□□ -0.44
TOP3B-215ENST00000470338 DIRAS1O95057 198 aa12.28□□□□□ -0.44
TOP3B-215ENST00000470338 HLA-HP01893 362 aa12.28□□□□□ -0.44
TOP3B-215ENST00000470338 CALCRP30988 508 aa12.28□□□□□ -0.44
TOP3B-215ENST00000470338 CAPZA2P47755 286 aa12.28□□□□□ -0.44
TOP3B-215ENST00000470338 CTXN1P60606 82 aa12.28□□□□□ -0.44
TOP3B-215ENST00000470338 RPL27P61353 136 aaKnown RBP12.28□□□□□ -0.44
TOP3B-215ENST00000470338 GSG1Q2KHT4 349 aa12.28□□□□□ -0.44
TOP3B-215ENST00000470338 NRN1LQ496H8 165 aa12.28□□□□□ -0.44
TOP3B-215ENST00000470338 ZBED5Q49AG3 693 aa12.28□□□□□ -0.44
TOP3B-215ENST00000470338 C10orf128Q5T292 105 aa12.28□□□□□ -0.44
TOP3B-215ENST00000470338 RINLQ6ZS11 566 aa12.28□□□□□ -0.44
TOP3B-215ENST00000470338 SKA3Q8IX90 412 aa12.28□□□□□ -0.44
TOP3B-215ENST00000470338 SLC22A24Q8N4F4 322 aa12.28□□□□□ -0.44
TOP3B-215ENST00000470338 SYT14Q8NB59 555 aa12.28□□□□□ -0.44
TOP3B-215ENST00000470338 IL17RDQ8NFM7 739 aa12.28□□□□□ -0.44
TOP3B-215ENST00000470338 OR4F15Q8NGB8 312 aa12.28□□□□□ -0.44
TOP3B-215ENST00000470338 OR13C2Q8NGS9 318 aa12.28□□□□□ -0.44
TOP3B-215ENST00000470338 HDAC2Q92769 488 aaKnown RBP12.28□□□□□ -0.44
TOP3B-215ENST00000470338 GTPBP3Q969Y2 492 aaKnown RBP12.28□□□□□ -0.44
TOP3B-215ENST00000470338 KCNK17Q96T54 332 aa12.28□□□□□ -0.44
TOP3B-215ENST00000470338 KCNS3Q9BQ31 491 aa12.28□□□□□ -0.44
TOP3B-215ENST00000470338 C1orf21Q9H246 121 aa12.28□□□□□ -0.44
TOP3B-215ENST00000470338 NOX3Q9HBY0 568 aa12.28□□□□□ -0.44
TOP3B-215ENST00000470338 IL1RAPQ9NPH3 570 aa12.28□□□□□ -0.44
TOP3B-215ENST00000470338 ZNF346Q9UL40 294 aaKnown RBP12.28□□□□□ -0.44
TOP3B-215ENST00000470338 V9GYQ6 96 aa12.28□□□□□ -0.44
TOP3B-215ENST00000470338 CHD3Q12873 2000 aaKnown RBP12.27□□□□□ -0.44
TOP3B-215ENST00000470338 IGHV2OR16-5A0A0B4J2B6 119 aa12.27□□□□□ -0.45
TOP3B-215ENST00000470338 MGRN1O60291 552 aa12.27□□□□□ -0.45
TOP3B-215ENST00000470338 ENTPD5O75356 428 aa12.27□□□□□ -0.45
TOP3B-215ENST00000470338 PTP4A3O75365 173 aa12.27□□□□□ -0.45
TOP3B-215ENST00000470338 OR8G3PP0DMU2 310 aa12.27□□□□□ -0.45
TOP3B-215ENST00000470338 CD79AP11912 226 aa12.27□□□□□ -0.45
TOP3B-215ENST00000470338 ZNF14P17017 642 aaPredicted RBP12.27□□□□□ -0.45
TOP3B-215ENST00000470338 ZNF26P17031 533 aaPredicted RBP12.27□□□□□ -0.45
TOP3B-215ENST00000470338 GPR4P46093 362 aa12.27□□□□□ -0.45
TOP3B-215ENST00000470338 OMPP47874 163 aa12.27□□□□□ -0.45
TOP3B-215ENST00000470338 LIMS1P48059 325 aa12.27□□□□□ -0.45
TOP3B-215ENST00000470338 IDH3GP51553 393 aaPredicted RBP12.27□□□□□ -0.45
TOP3B-215ENST00000470338 SMIM11AP58511 58 aa12.27□□□□□ -0.45
TOP3B-215ENST00000470338 RAB1AP62820 205 aa12.27□□□□□ -0.45
TOP3B-215ENST00000470338 MYBPC1Q00872 1141 aa12.27□□□□□ -0.45
TOP3B-215ENST00000470338 HGFACQ04756 655 aa12.27□□□□□ -0.45
TOP3B-215ENST00000470338 PIGFQ07326 219 aa12.27□□□□□ -0.45
TOP3B-215ENST00000470338 SEC23BQ15437 767 aa12.27□□□□□ -0.45
TOP3B-215ENST00000470338 FGD3Q5JSP0 725 aa12.27□□□□□ -0.45
TOP3B-215ENST00000470338 FAM205BPQ63HN1 556 aa12.27□□□□□ -0.45
TOP3B-215ENST00000470338 NUP37Q8NFH4 326 aa12.27□□□□□ -0.45
TOP3B-215ENST00000470338 OR4K5Q8NGD3 323 aa12.27□□□□□ -0.45
TOP3B-215ENST00000470338 FGFBP3Q8TAT2 258 aa12.27□□□□□ -0.45
TOP3B-215ENST00000470338 ZNF519Q8TB69 540 aa12.27□□□□□ -0.45
TOP3B-215ENST00000470338 BCAS4Q8TDM0 211 aa12.27□□□□□ -0.45
TOP3B-215ENST00000470338 NANOS1Q8WY41 292 aaKnown RBP12.27□□□□□ -0.45
TOP3B-215ENST00000470338 MCUR1Q96AQ8 359 aa12.27□□□□□ -0.45
TOP3B-215ENST00000470338 FAM46AQ96IP4 442 aaKnown RBP12.27□□□□□ -0.45
TOP3B-215ENST00000470338 Q96MF0 132 aa12.27□□□□□ -0.45
TOP3B-215ENST00000470338 ALG12Q9BV10 488 aa12.27□□□□□ -0.45
TOP3B-215ENST00000470338 MUC13Q9H3R2 512 aa12.27□□□□□ -0.45
TOP3B-215ENST00000470338 SMURF2Q9HAU4 748 aa12.27□□□□□ -0.45
TOP3B-215ENST00000470338 TAS2R1Q9NYW7 299 aa12.27□□□□□ -0.45
TOP3B-215ENST00000470338 ZANQ9Y493 2812 aa12.27□□□□□ -0.45
TOP3B-215ENST00000470338 SH3PXD2BA1X283 911 aa12.26□□□□□ -0.45
TOP3B-215ENST00000470338 UBL3O95164 117 aa12.26□□□□□ -0.45
TOP3B-215ENST00000470338 IGHV4-39P01824 125 aa12.26□□□□□ -0.45
TOP3B-215ENST00000470338 FABP3P05413 133 aa12.26□□□□□ -0.45
TOP3B-215ENST00000470338 NR2C1P13056 603 aa12.26□□□□□ -0.45
TOP3B-215ENST00000470338 ATP6V1B2P21281 511 aa12.26□□□□□ -0.45
TOP3B-215ENST00000470338 ACVR1BP36896 505 aa12.26□□□□□ -0.45
TOP3B-215ENST00000470338 ZNF84P51523 738 aa12.26□□□□□ -0.45
TOP3B-215ENST00000470338 NPRL3Q12980 569 aa12.26□□□□□ -0.45
TOP3B-215ENST00000470338 TRIM25Q14258 630 aaKnown RBP12.26□□□□□ -0.45
TOP3B-215ENST00000470338 ETFDHQ16134 617 aa12.26□□□□□ -0.45
TOP3B-215ENST00000470338 SWI5Q1ZZU3 235 aa12.26□□□□□ -0.45
TOP3B-215ENST00000470338 MST1LQ2TV78 715 aa12.26□□□□□ -0.45
TOP3B-215ENST00000470338 MTX3Q5HYI7 312 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms