RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 FAUP35544 74 aaKnown RBP12.35□□□□□ -0.43
BRCA1-209ENST00000470026 PSMA6P60900 246 aaKnown RBP12.35□□□□□ -0.43
BRCA1-209ENST00000470026 LCN6P62502 163 aa12.35□□□□□ -0.43
BRCA1-209ENST00000470026 MFSD13AQ14CX5 517 aa12.35□□□□□ -0.43
BRCA1-209ENST00000470026 RBMS2Q15434 407 aaKnown RBP12.35□□□□□ -0.43
BRCA1-209ENST00000470026 FAM166AQ6J272 317 aa12.35□□□□□ -0.43
BRCA1-209ENST00000470026 PARGQ86W56 976 aa12.35□□□□□ -0.43
BRCA1-209ENST00000470026 MEIOBQ8N635 442 aa12.35□□□□□ -0.43
BRCA1-209ENST00000470026 OR51A4Q8NGJ6 313 aa12.35□□□□□ -0.43
BRCA1-209ENST00000470026 HMGB4Q8WW32 186 aa12.35□□□□□ -0.43
BRCA1-209ENST00000470026 OR8B4Q96RC9 309 aa12.35□□□□□ -0.43
BRCA1-209ENST00000470026 AMELYQ99218 206 aa12.35□□□□□ -0.43
BRCA1-209ENST00000470026 CDCP1Q9H5V8 836 aa12.35□□□□□ -0.43
BRCA1-209ENST00000470026 SLC17A5Q9NRA2 495 aa12.35□□□□□ -0.43
BRCA1-209ENST00000470026 IKZF2Q9UKS7 526 aa12.35□□□□□ -0.43
BRCA1-209ENST00000470026 MMACHCQ9Y4U1 282 aa12.35□□□□□ -0.43
BRCA1-209ENST00000470026 SPTBP11277 2137 aa12.35□□□□□ -0.43
BRCA1-209ENST00000470026 CIB4A0PJX0 185 aa12.35□□□□□ -0.43
BRCA1-209ENST00000470026 GGT3PA6NGU5 568 aa12.35□□□□□ -0.43
BRCA1-209ENST00000470026 LILRA5A6NI73 299 aa12.35□□□□□ -0.43
BRCA1-209ENST00000470026 SHISA7A6NL88 538 aa12.35□□□□□ -0.43
BRCA1-209ENST00000470026 MCRIP1C9JLW8 97 aa12.35□□□□□ -0.43
BRCA1-209ENST00000470026 PYCARD-AS1I3L0S3 204 aa12.35□□□□□ -0.43
BRCA1-209ENST00000470026 CTAG2O75638 210 aa12.35□□□□□ -0.43
BRCA1-209ENST00000470026 RBBP9O75884 186 aa12.35□□□□□ -0.43
BRCA1-209ENST00000470026 CD1CP29017 333 aa12.35□□□□□ -0.43
BRCA1-209ENST00000470026 CCR4P51679 360 aa12.35□□□□□ -0.43
BRCA1-209ENST00000470026 TOMM20Q15388 145 aa12.35□□□□□ -0.43
BRCA1-209ENST00000470026 WDR38Q5JTN6 314 aa12.35□□□□□ -0.43
BRCA1-209ENST00000470026 TEX30Q5JUR7 227 aa12.35□□□□□ -0.43
BRCA1-209ENST00000470026 MAMSTRQ6ZN01 415 aa12.35□□□□□ -0.43
BRCA1-209ENST00000470026 BIVMQ86UB2 503 aa12.35□□□□□ -0.43
BRCA1-209ENST00000470026 ADGRG3Q86Y34 549 aa12.35□□□□□ -0.43
BRCA1-209ENST00000470026 ZNF676Q8N7Q3 588 aa12.35□□□□□ -0.43
BRCA1-209ENST00000470026 RTN4RQ9BZR6 473 aa12.35□□□□□ -0.43
BRCA1-209ENST00000470026 SYT4Q9H2B2 425 aa12.35□□□□□ -0.43
BRCA1-209ENST00000470026 ZNF69Q9UC07 566 aa12.35□□□□□ -0.43
BRCA1-209ENST00000470026 COL5A1P20908 1838 aaPredicted RBP12.34□□□□□ -0.43
BRCA1-209ENST00000470026 IGKV3D-11A0A0A0MRZ8 115 aa12.34□□□□□ -0.43
BRCA1-209ENST00000470026 LOC105371267A0A1B0GV96 52 aa12.34□□□□□ -0.43
BRCA1-209ENST00000470026 A0A1W2PPL8 197 aa12.34□□□□□ -0.43
BRCA1-209ENST00000470026 H0YC42 278 aa12.34□□□□□ -0.43
BRCA1-209ENST00000470026 I3L521 148 aa12.34□□□□□ -0.43
BRCA1-209ENST00000470026 MAS1P04201 325 aa12.34□□□□□ -0.43
BRCA1-209ENST00000470026 PROS1P07225 676 aa12.34□□□□□ -0.43
BRCA1-209ENST00000470026 CSF1P09603 554 aa12.34□□□□□ -0.43
BRCA1-209ENST00000470026 ZNF250P15622 560 aa12.34□□□□□ -0.43
BRCA1-209ENST00000470026 SSBP1Q04837 148 aaKnown RBP12.34□□□□□ -0.43
BRCA1-209ENST00000470026 OR4C16Q8NGL9 310 aa12.34□□□□□ -0.43
BRCA1-209ENST00000470026 OR6N1Q8NGY5 312 aa12.34□□□□□ -0.43
BRCA1-209ENST00000470026 CHIAQ9BZP6 476 aa12.34□□□□□ -0.43
BRCA1-209ENST00000470026 MED9Q9NWA0 146 aa12.34□□□□□ -0.43
BRCA1-209ENST00000470026 CD207Q9UJ71 328 aa12.34□□□□□ -0.43
BRCA1-209ENST00000470026 ING1Q9UK53 422 aaPredicted RBP12.34□□□□□ -0.43
BRCA1-209ENST00000470026 A0A1W2PPC4 97 aa12.34□□□□□ -0.43
BRCA1-209ENST00000470026 A0A1W2PQD3 144 aa12.34□□□□□ -0.43
BRCA1-209ENST00000470026 HMSDA8MTL9 139 aa12.34□□□□□ -0.43
BRCA1-209ENST00000470026 SLC17A2O00624 439 aa12.34□□□□□ -0.43
BRCA1-209ENST00000470026 HIST1H2ABP04908 130 aa12.34□□□□□ -0.43
BRCA1-209ENST00000470026 NFYAP23511 347 aaPredicted RBP12.34□□□□□ -0.43
BRCA1-209ENST00000470026 RORAP35398 523 aa12.34□□□□□ -0.43
BRCA1-209ENST00000470026 DLX5P56178 289 aa12.34□□□□□ -0.43
BRCA1-209ENST00000470026 RAB14P61106 215 aa12.34□□□□□ -0.43
BRCA1-209ENST00000470026 ROM1Q03395 351 aa12.34□□□□□ -0.43
BRCA1-209ENST00000470026 ZNF117Q03924 483 aa12.34□□□□□ -0.43
BRCA1-209ENST00000470026 SLC17A1Q14916 467 aa12.34□□□□□ -0.43
BRCA1-209ENST00000470026 PCGF3Q3KNV8 242 aa12.34□□□□□ -0.43
BRCA1-209ENST00000470026 ASPHD2Q6ICH7 369 aa12.34□□□□□ -0.43
BRCA1-209ENST00000470026 OR5M10Q6IEU7 315 aa12.34□□□□□ -0.43
BRCA1-209ENST00000470026 HIST3H2AQ7L7L0 130 aa12.34□□□□□ -0.43
BRCA1-209ENST00000470026 METTL27Q8N6F8 245 aaPredicted RBP12.34□□□□□ -0.43
BRCA1-209ENST00000470026 ZNF563Q8TA94 476 aa12.34□□□□□ -0.43
BRCA1-209ENST00000470026 ZNF519Q8TB69 540 aa12.34□□□□□ -0.43
BRCA1-209ENST00000470026 LRRC20Q8TCA0 184 aa12.34□□□□□ -0.43
BRCA1-209ENST00000470026 ZNF721Q8TF20 911 aa12.34□□□□□ -0.43
BRCA1-209ENST00000470026 ASB17Q8WXJ9 295 aa12.34□□□□□ -0.43
BRCA1-209ENST00000470026 HIST1H2ACQ93077 130 aa12.34□□□□□ -0.43
BRCA1-209ENST00000470026 PNPLA2Q96AD5 504 aa12.34□□□□□ -0.43
BRCA1-209ENST00000470026 SFXN2Q96NB2 322 aa12.34□□□□□ -0.43
BRCA1-209ENST00000470026 PTDSS2Q9BVG9 487 aa12.34□□□□□ -0.43
BRCA1-209ENST00000470026 KCNG2Q9UJ96 466 aa12.34□□□□□ -0.43
BRCA1-209ENST00000470026 MRTO4Q9UKD2 239 aaKnown RBP12.34□□□□□ -0.43
BRCA1-209ENST00000470026 SLCO1B1Q9Y6L6 691 aa12.34□□□□□ -0.43
BRCA1-209ENST00000470026 TDRD6O60522 2096 aaKnown RBP12.33□□□□□ -0.44
BRCA1-209ENST00000470026 TRAV36DV7A0A075B6V5 113 aa12.33□□□□□ -0.44
BRCA1-209ENST00000470026 H3BMH7 237 aa12.33□□□□□ -0.44
BRCA1-209ENST00000470026 RGS11O94810 467 aa12.33□□□□□ -0.44
BRCA1-209ENST00000470026 DDAH2O95865 285 aa12.33□□□□□ -0.44
BRCA1-209ENST00000470026 MELTFP08582 738 aa12.33□□□□□ -0.44
BRCA1-209ENST00000470026 EFNB2P52799 333 aa12.33□□□□□ -0.44
BRCA1-209ENST00000470026 NKAIN2Q5VXU1 208 aa12.33□□□□□ -0.44
BRCA1-209ENST00000470026 FAM198BQ6UWH4 519 aa12.33□□□□□ -0.44
BRCA1-209ENST00000470026 C3P1Q6ZMU1 363 aa12.33□□□□□ -0.44
BRCA1-209ENST00000470026 KANSL1Q7Z3B3 1105 aa12.33□□□□□ -0.44
BRCA1-209ENST00000470026 BPHLQ86WA6 291 aaPredicted RBP12.33□□□□□ -0.44
BRCA1-209ENST00000470026 C17orf82Q86X59 251 aaPredicted RBP12.33□□□□□ -0.44
BRCA1-209ENST00000470026 TMEM151BQ8IW70 566 aa12.33□□□□□ -0.44
BRCA1-209ENST00000470026 PM20D2Q8IYS1 436 aa12.33□□□□□ -0.44
BRCA1-209ENST00000470026 OR51D1Q8NGF3 324 aa12.33□□□□□ -0.44
BRCA1-209ENST00000470026 FAM174AQ8TBP5 190 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms