RNA–Protein interactions for RNA: ENST00000469802.5

COL9A3-208, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-208ENST00000469802 ENTPD5O75356 428 aa14.03□□□□□ -0.16
COL9A3-208ENST00000469802 OR7A10O76100 309 aa14.03□□□□□ -0.16
COL9A3-208ENST00000469802 IGHG1P01857 330 aa14.03□□□□□ -0.16
COL9A3-208ENST00000469802 HIST1H2ABP04908 130 aa14.03□□□□□ -0.16
COL9A3-208ENST00000469802 SERPINA5P05154 406 aa14.03□□□□□ -0.16
COL9A3-208ENST00000469802 ERCC1P07992 297 aaPredicted RBP14.03□□□□□ -0.16
COL9A3-208ENST00000469802 VIMP08670 466 aaKnown RBP14.03□□□□□ -0.16
COL9A3-208ENST00000469802 TACSTD2P09758 323 aa14.03□□□□□ -0.16
COL9A3-208ENST00000469802 PATE4P0C8F1 98 aa14.03□□□□□ -0.16
COL9A3-208ENST00000469802 OR8G3PP0DMU2 310 aa14.03□□□□□ -0.16
COL9A3-208ENST00000469802 THRBP10828 461 aa14.03□□□□□ -0.16
COL9A3-208ENST00000469802 UMPSP11172 480 aa14.03□□□□□ -0.16
COL9A3-208ENST00000469802 APEHP13798 732 aaKnown RBP14.03□□□□□ -0.16
COL9A3-208ENST00000469802 ZNF133P52736 654 aaPredicted RBP14.03□□□□□ -0.16
COL9A3-208ENST00000469802 TAS2R41P59536 307 aa14.03□□□□□ -0.16
COL9A3-208ENST00000469802 RUNX1T1Q06455 604 aa14.03□□□□□ -0.16
COL9A3-208ENST00000469802 PIN1Q13526 163 aaPredicted RBP14.03□□□□□ -0.16
COL9A3-208ENST00000469802 RAB39AQ14964 217 aa14.03□□□□□ -0.16
COL9A3-208ENST00000469802 MMEL1Q495T6 779 aa14.03□□□□□ -0.16
COL9A3-208ENST00000469802 DEF8Q6ZN54 512 aa14.03□□□□□ -0.16
COL9A3-208ENST00000469802 HIST3H2AQ7L7L0 130 aa14.03□□□□□ -0.16
COL9A3-208ENST00000469802 NOXO1Q8NFA2 376 aa14.03□□□□□ -0.16
COL9A3-208ENST00000469802 ASB10Q8WXI3 467 aa14.03□□□□□ -0.16
COL9A3-208ENST00000469802 HIST1H2ACQ93077 130 aa14.03□□□□□ -0.16
COL9A3-208ENST00000469802 CCDC134Q9H6E4 229 aa14.03□□□□□ -0.16
COL9A3-208ENST00000469802 ZNF446Q9NWS9 450 aa14.03□□□□□ -0.16
COL9A3-208ENST00000469802 RIMS3Q9UJD0 308 aa14.03□□□□□ -0.16
COL9A3-208ENST00000469802 SPEF1Q9Y4P9 236 aa14.03□□□□□ -0.16
COL9A3-208ENST00000469802 NPIPB13A6NJU9 1138 aa14.02□□□□□ -0.17
COL9A3-208ENST00000469802 NPIPB4C9JG80 1138 aa14.02□□□□□ -0.17
COL9A3-208ENST00000469802 BLOC1S5-TXNDC5H3BN57 136 aa14.02□□□□□ -0.17
COL9A3-208ENST00000469802 M0R233 179 aa14.02□□□□□ -0.17
COL9A3-208ENST00000469802 SLC22A2O15244 555 aa14.02□□□□□ -0.17
COL9A3-208ENST00000469802 SYNGR3O43761 229 aa14.02□□□□□ -0.17
COL9A3-208ENST00000469802 SHOX2O60902 331 aaPredicted RBP14.02□□□□□ -0.17
COL9A3-208ENST00000469802 LILRA1O75019 489 aa14.02□□□□□ -0.17
COL9A3-208ENST00000469802 BCL10O95999 233 aa14.02□□□□□ -0.17
COL9A3-208ENST00000469802 ADRA2AP08913 450 aa14.02□□□□□ -0.17
COL9A3-208ENST00000469802 QDPRP09417 244 aa14.02□□□□□ -0.17
COL9A3-208ENST00000469802 OR1E2P47887 323 aa14.02□□□□□ -0.17
COL9A3-208ENST00000469802 RPS23P62266 143 aaKnown RBP14.02□□□□□ -0.17
COL9A3-208ENST00000469802 RIN1Q13671 783 aa14.02□□□□□ -0.17
COL9A3-208ENST00000469802 CYBRD1Q53TN4 286 aa14.02□□□□□ -0.17
COL9A3-208ENST00000469802 C10orf128Q5T292 105 aa14.02□□□□□ -0.17
COL9A3-208ENST00000469802 FAM166AQ6J272 317 aa14.02□□□□□ -0.17
COL9A3-208ENST00000469802 DPPA2Q7Z7J5 298 aa14.02□□□□□ -0.17
COL9A3-208ENST00000469802 ARIH2OSQ8N7S6 290 aa14.02□□□□□ -0.17
COL9A3-208ENST00000469802 TMEM239Q8WW34 195 aa14.02□□□□□ -0.17
COL9A3-208ENST00000469802 MCHR2Q969V1 340 aa14.02□□□□□ -0.17
COL9A3-208ENST00000469802 NMD3Q96D46 503 aaKnown RBP14.02□□□□□ -0.17
COL9A3-208ENST00000469802 SGTBQ96EQ0 304 aa14.02□□□□□ -0.17
COL9A3-208ENST00000469802 ZNF347Q96SE7 839 aa14.02□□□□□ -0.17
COL9A3-208ENST00000469802 SOX7Q9BT81 388 aa14.02□□□□□ -0.17
COL9A3-208ENST00000469802 SLC7A8Q9UHI5 535 aa14.02□□□□□ -0.17
COL9A3-208ENST00000469802 CAPN7Q9Y6W3 813 aa14.02□□□□□ -0.17
COL9A3-208ENST00000469802 LOC100289279A0A1B0GTE1 492 aa14.01□□□□□ -0.17
COL9A3-208ENST00000469802 A0A1W2PRG6 482 aa14.01□□□□□ -0.17
COL9A3-208ENST00000469802 SH3PXD2BA1X283 911 aa14.01□□□□□ -0.17
COL9A3-208ENST00000469802 IFNA14P01570 189 aa14.01□□□□□ -0.17
COL9A3-208ENST00000469802 F13BP05160 661 aa14.01□□□□□ -0.17
COL9A3-208ENST00000469802 FUT1P19526 365 aa14.01□□□□□ -0.17
COL9A3-208ENST00000469802 KDELR2P33947 212 aa14.01□□□□□ -0.17
COL9A3-208ENST00000469802 AQP2P41181 271 aa14.01□□□□□ -0.17
COL9A3-208ENST00000469802 DAP3P51398 398 aaKnown RBP14.01□□□□□ -0.17
COL9A3-208ENST00000469802 GALK2Q01415 458 aa14.01□□□□□ -0.17
COL9A3-208ENST00000469802 IQCCQ4KMZ1 466 aa14.01□□□□□ -0.17
COL9A3-208ENST00000469802 LRRC23Q53EV4 343 aaPredicted RBP14.01□□□□□ -0.17
COL9A3-208ENST00000469802 ARMC4Q5T2S8 1044 aa14.01□□□□□ -0.17
COL9A3-208ENST00000469802 HDDC2Q7Z4H3 204 aa14.01□□□□□ -0.17
COL9A3-208ENST00000469802 PAQR4Q8N4S7 273 aaPredicted RBP14.01□□□□□ -0.17
COL9A3-208ENST00000469802 PCYOX1LQ8NBM8 494 aa14.01□□□□□ -0.17
COL9A3-208ENST00000469802 OR2T12Q8NG77 320 aa14.01□□□□□ -0.17
COL9A3-208ENST00000469802 OR4K5Q8NGD3 323 aa14.01□□□□□ -0.17
COL9A3-208ENST00000469802 UBASH3BQ8TF42 649 aa14.01□□□□□ -0.17
COL9A3-208ENST00000469802 SH3GL3Q99963 347 aa14.01□□□□□ -0.17
COL9A3-208ENST00000469802 BEX2Q9BXY8 128 aa14.01□□□□□ -0.17
COL9A3-208ENST00000469802 TPK1Q9H3S4 243 aa14.01□□□□□ -0.17
COL9A3-208ENST00000469802 INIPQ9NRY2 104 aa14.01□□□□□ -0.17
COL9A3-208ENST00000469802 GID8Q9NWU2 228 aa14.01□□□□□ -0.17
COL9A3-208ENST00000469802 MYEF2Q9P2K5 600 aaKnown RBP14.01□□□□□ -0.17
COL9A3-208ENST00000469802 KCNS2Q9ULS6 477 aa14.01□□□□□ -0.17
COL9A3-208ENST00000469802 LOC100653049A0A140TA62 436 aa14□□□□□ -0.17
COL9A3-208ENST00000469802 LRP5LA4QPB2 252 aa14□□□□□ -0.17
COL9A3-208ENST00000469802 TRMUO75648 421 aaKnown RBP14□□□□□ -0.17
COL9A3-208ENST00000469802 KRT34O76011 436 aa14□□□□□ -0.17
COL9A3-208ENST00000469802 FARS2O95363 451 aaKnown RBP14□□□□□ -0.17
COL9A3-208ENST00000469802 SNAP29O95721 258 aa14□□□□□ -0.17
COL9A3-208ENST00000469802 MMP7P09237 267 aaPredicted RBP14□□□□□ -0.17
COL9A3-208ENST00000469802 CLRN1P58418 232 aa14□□□□□ -0.17
COL9A3-208ENST00000469802 SF3A3Q12874 501 aaKnown RBP eCLIP14□□□□□ -0.179e-8■■■■□ 22.2
COL9A3-208ENST00000469802 GKAP1Q5VSY0 366 aaPredicted RBP14□□□□□ -0.17
COL9A3-208ENST00000469802 LRP11Q86VZ4 500 aa14□□□□□ -0.17
COL9A3-208ENST00000469802 MICU2Q8IYU8 434 aa14□□□□□ -0.17
COL9A3-208ENST00000469802 SLC30A7Q8NEW0 376 aa14□□□□□ -0.17
COL9A3-208ENST00000469802 MOSPD2Q8NHP6 518 aa14□□□□□ -0.17
COL9A3-208ENST00000469802 PRRC1Q96M27 445 aa14□□□□□ -0.17
COL9A3-208ENST00000469802 SYT3Q9BQG1 590 aa14□□□□□ -0.17
COL9A3-208ENST00000469802 SHARPINQ9H0F6 387 aa14□□□□□ -0.17
COL9A3-208ENST00000469802 MS4A5Q9H3V2 200 aa14□□□□□ -0.17
COL9A3-208ENST00000469802 C1orf198Q9H425 327 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms