RNA–Protein interactions for RNA: ENST00000469694.5

GPC1-208, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 2,862 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-208ENST00000469694 THADAQ6YHU6 1953 aa12.64□□□□□ -0.39
GPC1-208ENST00000469694 OR6C68A6NDL8 312 aa12.63□□□□□ -0.39
GPC1-208ENST00000469694 ANKRD61A6NGH8 418 aa12.63□□□□□ -0.39
GPC1-208ENST00000469694 RHPN2P1A8MT19 583 aa12.63□□□□□ -0.39
GPC1-208ENST00000469694 SYT5O00445 386 aa12.63□□□□□ -0.39
GPC1-208ENST00000469694 GPR75O95800 540 aa12.63□□□□□ -0.39
GPC1-208ENST00000469694 MRPL3P09001 348 aaKnown RBP12.63□□□□□ -0.39
GPC1-208ENST00000469694 UCHL1P09936 223 aa12.63□□□□□ -0.39
GPC1-208ENST00000469694 BTG2P78543 158 aa12.63□□□□□ -0.39
GPC1-208ENST00000469694 MPPED2Q15777 294 aa12.63□□□□□ -0.39
GPC1-208ENST00000469694 TMPRSS9Q7Z410 1059 aa12.63□□□□□ -0.39
GPC1-208ENST00000469694 ARMC10Q8N2F6 343 aa12.63□□□□□ -0.39
GPC1-208ENST00000469694 ANKRD9Q96BM1 317 aaPredicted RBP12.63□□□□□ -0.39
GPC1-208ENST00000469694 INTS12Q96CB8 462 aaKnown RBP12.63□□□□□ -0.39
GPC1-208ENST00000469694 TEAD3Q99594 435 aa12.63□□□□□ -0.39
GPC1-208ENST00000469694 ARHGDIGQ99819 225 aa12.63□□□□□ -0.39
GPC1-208ENST00000469694 PDCD10Q9BUL8 212 aa12.63□□□□□ -0.39
GPC1-208ENST00000469694 CACYBPQ9HB71 228 aaKnown RBP12.63□□□□□ -0.39
GPC1-208ENST00000469694 RP1P56715 2156 aa12.63□□□□□ -0.39
GPC1-208ENST00000469694 EML5Q05BV3 1969 aa12.63□□□□□ -0.39
GPC1-208ENST00000469694 RFPL4AA6NLU0 287 aa12.63□□□□□ -0.39
GPC1-208ENST00000469694 RFPL4AL1F8VTS6 287 aa12.63□□□□□ -0.39
GPC1-208ENST00000469694 PRKNO60260 465 aaPredicted RBP12.63□□□□□ -0.39
GPC1-208ENST00000469694 CRYBA1P05813 215 aa12.63□□□□□ -0.39
GPC1-208ENST00000469694 P2RX1P51575 399 aa12.63□□□□□ -0.39
GPC1-208ENST00000469694 AFF3P51826 1226 aaKnown RBP12.63□□□□□ -0.39
GPC1-208ENST00000469694 UBE2MP61081 183 aaKnown RBP12.63□□□□□ -0.39
GPC1-208ENST00000469694 C14orf28Q4W4Y0 310 aa12.63□□□□□ -0.39
GPC1-208ENST00000469694 MBOAT2Q6ZWT7 520 aa12.63□□□□□ -0.39
GPC1-208ENST00000469694 ADAT1Q9BUB4 502 aaKnown RBP12.63□□□□□ -0.39
GPC1-208ENST00000469694 ENKD1Q9H0I2 346 aa12.63□□□□□ -0.39
GPC1-208ENST00000469694 SSX5O60225 188 aa12.63□□□□□ -0.39
GPC1-208ENST00000469694 THY1P04216 161 aa12.63□□□□□ -0.39
GPC1-208ENST00000469694 SBK2P0C263 348 aa12.63□□□□□ -0.39
GPC1-208ENST00000469694 PTHLHP12272 177 aa12.63□□□□□ -0.39
GPC1-208ENST00000469694 ADCYAP1P18509 176 aa12.63□□□□□ -0.39
GPC1-208ENST00000469694 FIGNL1Q6PIW4 674 aa12.63□□□□□ -0.39
GPC1-208ENST00000469694 PGAP1Q75T13 922 aa12.63□□□□□ -0.39
GPC1-208ENST00000469694 MUC20Q8N307 709 aaPredicted RBP12.63□□□□□ -0.39
GPC1-208ENST00000469694 FAM174AQ8TBP5 190 aa12.63□□□□□ -0.39
GPC1-208ENST00000469694 TMEM255BQ8WV15 326 aa12.63□□□□□ -0.39
GPC1-208ENST00000469694 MOAP1Q96BY2 351 aa12.63□□□□□ -0.39
GPC1-208ENST00000469694 ZNF251Q9BRH9 671 aa12.63□□□□□ -0.39
GPC1-208ENST00000469694 BCL2L14Q9BZR8 327 aa12.63□□□□□ -0.39
GPC1-208ENST00000469694 ANKRD10Q9NXR5 420 aa12.63□□□□□ -0.39
GPC1-208ENST00000469694 MYEF2Q9P2K5 600 aaKnown RBP12.63□□□□□ -0.39
GPC1-208ENST00000469694 SPACA6W5XKT8 324 aa12.63□□□□□ -0.39
GPC1-208ENST00000469694 SLC22A31A6NKX4 558 aa12.62□□□□□ -0.39
GPC1-208ENST00000469694 SULT1C2O00338 296 aa12.62□□□□□ -0.39
GPC1-208ENST00000469694 GNB5O14775 395 aa12.62□□□□□ -0.39
GPC1-208ENST00000469694 EIF1BO60739 113 aaKnown RBP12.62□□□□□ -0.39
GPC1-208ENST00000469694 SMIM6P0DI80 62 aa12.62□□□□□ -0.39
GPC1-208ENST00000469694 MAOAP21397 527 aa12.62□□□□□ -0.39
GPC1-208ENST00000469694 DPP4P27487 766 aa12.62□□□□□ -0.39
GPC1-208ENST00000469694 EIF1P41567 113 aaKnown RBP12.62□□□□□ -0.39
GPC1-208ENST00000469694 NR0B1P51843 470 aaKnown RBP12.62□□□□□ -0.39
GPC1-208ENST00000469694 MRPS10P82664 201 aaKnown RBP12.62□□□□□ -0.39
GPC1-208ENST00000469694 CFHR1Q03591 330 aa12.62□□□□□ -0.39
GPC1-208ENST00000469694 PRICKLE4Q2TBC4 344 aa12.62□□□□□ -0.39
GPC1-208ENST00000469694 PRTGQ2VWP7 1150 aa12.62□□□□□ -0.39
GPC1-208ENST00000469694 FCRLAQ7L513 359 aa12.62□□□□□ -0.39
GPC1-208ENST00000469694 SLC35F3Q8IY50 421 aa12.62□□□□□ -0.39
GPC1-208ENST00000469694 SPAG16Q8N0X2 631 aa12.62□□□□□ -0.39
GPC1-208ENST00000469694 MMABQ96EY8 250 aaPredicted RBP12.62□□□□□ -0.39
GPC1-208ENST00000469694 PTDSS2Q9BVG9 487 aa12.62□□□□□ -0.39
GPC1-208ENST00000469694 WDR13Q9H1Z4 485 aa12.62□□□□□ -0.39
GPC1-208ENST00000469694 NRIP3Q9NQ35 241 aa12.62□□□□□ -0.39
GPC1-208ENST00000469694 SLC13A4Q9UKG4 626 aa12.62□□□□□ -0.39
GPC1-208ENST00000469694 FOXJ3Q9UPW0 622 aa12.62□□□□□ -0.39
GPC1-208ENST00000469694 RAB19A4D1S5 217 aa12.62□□□□□ -0.39
GPC1-208ENST00000469694 PRG2P13727 222 aa12.62□□□□□ -0.39
GPC1-208ENST00000469694 CAPZA2P47755 286 aa12.62□□□□□ -0.39
GPC1-208ENST00000469694 DHPSP49366 369 aaPredicted RBP12.62□□□□□ -0.39
GPC1-208ENST00000469694 SLC16A1P53985 500 aa12.62□□□□□ -0.39
GPC1-208ENST00000469694 RPS11P62280 158 aaKnown RBP eCLIP12.62□□□□□ -0.39
GPC1-208ENST00000469694 CBFBQ13951 182 aa12.62□□□□□ -0.39
GPC1-208ENST00000469694 AVPI1Q5T686 147 aa12.62□□□□□ -0.39
GPC1-208ENST00000469694 HES5Q5TA89 166 aa12.62□□□□□ -0.39
GPC1-208ENST00000469694 FHL5Q5TD97 284 aa12.62□□□□□ -0.39
GPC1-208ENST00000469694 FRRS1Q6ZNA5 592 aa12.62□□□□□ -0.39
GPC1-208ENST00000469694 C17orf82Q86X59 251 aaPredicted RBP12.62□□□□□ -0.39
GPC1-208ENST00000469694 BOLLQ8N9W6 283 aaKnown RBP12.62□□□□□ -0.39
GPC1-208ENST00000469694 TCTN2Q96GX1 697 aa12.62□□□□□ -0.39
GPC1-208ENST00000469694 FAM117AQ9C073 453 aa12.62□□□□□ -0.39
GPC1-208ENST00000469694 ADGRL4Q9HBW9 690 aa12.62□□□□□ -0.39
GPC1-208ENST00000469694 SLC22A11Q9NSA0 550 aa12.62□□□□□ -0.39
GPC1-208ENST00000469694 CEP192Q8TEP8 1941 aa12.62□□□□□ -0.39
GPC1-208ENST00000469694 A0A0D9SG52 128 aa12.61□□□□□ -0.39
GPC1-208ENST00000469694 TMEM272A0A1B0GTI8 110 aa12.61□□□□□ -0.39
GPC1-208ENST00000469694 A0A1B0GTQ1 180 aa12.61□□□□□ -0.39
GPC1-208ENST00000469694 ACOT7O00154 380 aa12.61□□□□□ -0.39
GPC1-208ENST00000469694 OGG1O15527 345 aa12.61□□□□□ -0.39
GPC1-208ENST00000469694 OR10H2O60403 315 aa12.61□□□□□ -0.39
GPC1-208ENST00000469694 ANXA11P50995 505 aaKnown RBP12.61□□□□□ -0.39
GPC1-208ENST00000469694 MGAT2Q10469 447 aa12.61□□□□□ -0.39
GPC1-208ENST00000469694 RBMS2Q15434 407 aaKnown RBP12.61□□□□□ -0.39
GPC1-208ENST00000469694 NNATQ16517 81 aa12.61□□□□□ -0.39
GPC1-208ENST00000469694 SLC16A13Q7RTY0 426 aa12.61□□□□□ -0.39
GPC1-208ENST00000469694 GDF7Q7Z4P5 450 aa12.61□□□□□ -0.39
GPC1-208ENST00000469694 ZNF546Q86UE3 836 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms