RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 LDLRP01130 860 aa5.54□□□□□ -1.52
PTCD3-208ENST00000469585 CLEC3BP05452 202 aa5.54□□□□□ -1.52
PTCD3-208ENST00000469585 CRHP06850 196 aa5.54□□□□□ -1.52
PTCD3-208ENST00000469585 NPIPA8P0DM63 369 aa5.54□□□□□ -1.52
PTCD3-208ENST00000469585 ETFAP13804 333 aa5.54□□□□□ -1.52
PTCD3-208ENST00000469585 CAPN3P20807 821 aa5.54□□□□□ -1.52
PTCD3-208ENST00000469585 HTR1EP28566 365 aa5.54□□□□□ -1.52
PTCD3-208ENST00000469585 SFTPDP35247 375 aa5.54□□□□□ -1.52
PTCD3-208ENST00000469585 TIMP3P35625 211 aa5.54□□□□□ -1.52
PTCD3-208ENST00000469585 MAP3K8P41279 467 aa5.54□□□□□ -1.52
PTCD3-208ENST00000469585 CDKN2CP42773 168 aa5.54□□□□□ -1.52
PTCD3-208ENST00000469585 CLK1P49759 484 aaKnown RBP5.54□□□□□ -1.52
PTCD3-208ENST00000469585 NUDT2P50583 147 aa5.54□□□□□ -1.52
PTCD3-208ENST00000469585 POLR2HP52434 150 aaKnown RBP5.54□□□□□ -1.52
PTCD3-208ENST00000469585 CARD18P57730 90 aa5.54□□□□□ -1.52
PTCD3-208ENST00000469585 NUP107P57740 925 aa5.54□□□□□ -1.52
PTCD3-208ENST00000469585 IL1RL1Q01638 556 aa5.54□□□□□ -1.52
PTCD3-208ENST00000469585 ZNF117Q03924 483 aa5.54□□□□□ -1.52
PTCD3-208ENST00000469585 CRYZQ08257 329 aaKnown RBP5.54□□□□□ -1.52
PTCD3-208ENST00000469585 QPRTQ15274 297 aa5.54□□□□□ -1.52
PTCD3-208ENST00000469585 TBCEQ15813 527 aaPredicted RBP5.54□□□□□ -1.52
PTCD3-208ENST00000469585 SYPL1Q16563 259 aa5.54□□□□□ -1.52
PTCD3-208ENST00000469585 ACSF3Q4G176 576 aaPredicted RBP5.54□□□□□ -1.52
PTCD3-208ENST00000469585 LRIF1Q5T3J3 769 aa5.54□□□□□ -1.52
PTCD3-208ENST00000469585 DCAF12L2Q5VW00 463 aa5.54□□□□□ -1.52
PTCD3-208ENST00000469585 NSUN5P2Q63ZY6 315 aa5.54□□□□□ -1.52
PTCD3-208ENST00000469585 C5orf46Q6UWT4 87 aa5.54□□□□□ -1.52
PTCD3-208ENST00000469585 SLC46A3Q7Z3Q1 461 aa5.54□□□□□ -1.52
PTCD3-208ENST00000469585 GRINAQ7Z429 371 aa5.54□□□□□ -1.52
PTCD3-208ENST00000469585 SNX32Q86XE0 403 aa5.54□□□□□ -1.52
PTCD3-208ENST00000469585 LURAP1LQ8IV03 231 aa5.54□□□□□ -1.52
PTCD3-208ENST00000469585 SLC43A2Q8N370 569 aa5.54□□□□□ -1.52
PTCD3-208ENST00000469585 CADM2Q8N3J6 435 aa5.54□□□□□ -1.52
PTCD3-208ENST00000469585 GTPBP8Q8N3Z3 284 aaPredicted RBP5.54□□□□□ -1.52
PTCD3-208ENST00000469585 CNEP1R1Q8N9A8 125 aa5.54□□□□□ -1.52
PTCD3-208ENST00000469585 FADS6Q8N9I5 356 aa5.54□□□□□ -1.52
PTCD3-208ENST00000469585 WDSUB1Q8N9V3 476 aa5.54□□□□□ -1.52
PTCD3-208ENST00000469585 OR8J3Q8NGG0 315 aa5.54□□□□□ -1.52
PTCD3-208ENST00000469585 SLC35B4Q969S0 331 aa5.54□□□□□ -1.52
PTCD3-208ENST00000469585 TMEM19Q96HH6 336 aa5.54□□□□□ -1.52
PTCD3-208ENST00000469585 RNF145Q96MT1 663 aa5.54□□□□□ -1.52
PTCD3-208ENST00000469585 EPYCQ99645 322 aa5.54□□□□□ -1.52
PTCD3-208ENST00000469585 HOPXQ9BPY8 73 aaPredicted RBP5.54□□□□□ -1.52
PTCD3-208ENST00000469585 TREX2Q9BQ50 279 aaPredicted RBP5.54□□□□□ -1.52
PTCD3-208ENST00000469585 TTYH2Q9BSA4 534 aa5.54□□□□□ -1.52
PTCD3-208ENST00000469585 NAA11Q9BSU3 229 aaPredicted RBP5.54□□□□□ -1.52
PTCD3-208ENST00000469585 SFXN3Q9BWM7 321 aa5.54□□□□□ -1.52
PTCD3-208ENST00000469585 PINK1Q9BXM7 581 aa5.54□□□□□ -1.52
PTCD3-208ENST00000469585 NDEL1Q9GZM8 345 aa5.54□□□□□ -1.52
PTCD3-208ENST00000469585 UBQLN3Q9H347 655 aa5.54□□□□□ -1.52
PTCD3-208ENST00000469585 TMEM38AQ9H6F2 299 aa5.54□□□□□ -1.52
PTCD3-208ENST00000469585 KRCC1Q9NPI7 259 aaPredicted RBP5.54□□□□□ -1.52
PTCD3-208ENST00000469585 MED17Q9NVC6 651 aa5.54□□□□□ -1.52
PTCD3-208ENST00000469585 ZNF629Q9UEG4 869 aaPredicted RBP5.54□□□□□ -1.52
PTCD3-208ENST00000469585 A4GNTQ9UNA3 340 aa5.54□□□□□ -1.52
PTCD3-208ENST00000469585 ZNF175Q9Y473 711 aa5.54□□□□□ -1.52
PTCD3-208ENST00000469585 LIPGQ9Y5X9 500 aa5.54□□□□□ -1.52
PTCD3-208ENST00000469585 LOC400499M0QZD8 3231 aa5.54□□□□□ -1.52
PTCD3-208ENST00000469585 NINQ8N4C6 2090 aa5.53□□□□□ -1.52
PTCD3-208ENST00000469585 TNFSF12-TNFSF13A0A0A6YY99 330 aa5.53□□□□□ -1.52
PTCD3-208ENST00000469585 OR2M5A3KFT3 312 aa5.53□□□□□ -1.52
PTCD3-208ENST00000469585 NPIPB11E5RHQ5 1161 aa5.53□□□□□ -1.52
PTCD3-208ENST00000469585 SULT2B1O00204 365 aa5.53□□□□□ -1.52
PTCD3-208ENST00000469585 AIM2O14862 343 aa5.53□□□□□ -1.52
PTCD3-208ENST00000469585 EIF1BO60739 113 aaKnown RBP5.53□□□□□ -1.52
PTCD3-208ENST00000469585 SCN2BO60939 215 aa5.53□□□□□ -1.52
PTCD3-208ENST00000469585 UGT2B17O75795 530 aa5.53□□□□□ -1.52
PTCD3-208ENST00000469585 KRT33AO76009 404 aa5.53□□□□□ -1.52
PTCD3-208ENST00000469585 IGKV1D-16P01601 117 aa5.53□□□□□ -1.52
PTCD3-208ENST00000469585 PNMTP11086 282 aa5.53□□□□□ -1.52
PTCD3-208ENST00000469585 ZNF708P17019 499 aa5.53□□□□□ -1.52
PTCD3-208ENST00000469585 PRDX6P30041 224 aa5.53□□□□□ -1.52
PTCD3-208ENST00000469585 PTGDSP41222 190 aa5.53□□□□□ -1.52
PTCD3-208ENST00000469585 IDH2P48735 452 aaKnown RBP5.53□□□□□ -1.52
PTCD3-208ENST00000469585 ASCL1P50553 236 aa5.53□□□□□ -1.52
PTCD3-208ENST00000469585 P2RX3P56373 397 aa5.53□□□□□ -1.52
PTCD3-208ENST00000469585 CLDN15P56746 228 aa5.53□□□□□ -1.52
PTCD3-208ENST00000469585 RGS8P57771 180 aaPredicted RBP5.53□□□□□ -1.52
PTCD3-208ENST00000469585 ZP1P60852 638 aa5.53□□□□□ -1.52
PTCD3-208ENST00000469585 MYBPHQ13203 477 aa5.53□□□□□ -1.52
PTCD3-208ENST00000469585 PON3Q15166 354 aa5.53□□□□□ -1.52
PTCD3-208ENST00000469585 PLPPR5Q32ZL2 321 aa5.53□□□□□ -1.52
PTCD3-208ENST00000469585 TMEM176BQ3YBM2 270 aaPredicted RBP5.53□□□□□ -1.52
PTCD3-208ENST00000469585 MRPL2Q5T653 305 aaKnown RBP5.53□□□□□ -1.52
PTCD3-208ENST00000469585 REP15Q6BDI9 236 aa5.53□□□□□ -1.52
PTCD3-208ENST00000469585 WBP2NLQ6ICG8 309 aa5.53□□□□□ -1.52
PTCD3-208ENST00000469585 TYW3Q6IPR3 259 aaKnown RBP5.53□□□□□ -1.52
PTCD3-208ENST00000469585 ARSKQ6UWY0 536 aa5.53□□□□□ -1.52
PTCD3-208ENST00000469585 FRRS1Q6ZNA5 592 aa5.53□□□□□ -1.52
PTCD3-208ENST00000469585 Q6ZSV7 163 aa5.53□□□□□ -1.52
PTCD3-208ENST00000469585 CYP4Z1Q86W10 505 aa5.53□□□□□ -1.52
PTCD3-208ENST00000469585 ANKFN1Q8N957 763 aa5.53□□□□□ -1.52
PTCD3-208ENST00000469585 CCDC197Q8NCU1 140 aa5.53□□□□□ -1.52
PTCD3-208ENST00000469585 GJC3Q8NFK1 279 aa5.53□□□□□ -1.52
PTCD3-208ENST00000469585 OR2T12Q8NG77 320 aa5.53□□□□□ -1.52
PTCD3-208ENST00000469585 OR10A6Q8NH74 314 aa5.53□□□□□ -1.52
PTCD3-208ENST00000469585 OR2V1Q8NHB1 315 aa5.53□□□□□ -1.52
PTCD3-208ENST00000469585 PIGXQ8TBF5 258 aa5.53□□□□□ -1.52
PTCD3-208ENST00000469585 SLC38A5Q8WUX1 472 aa5.53□□□□□ -1.52
PTCD3-208ENST00000469585 DNAJA4Q8WW22 397 aaPredicted RBP5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms