RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 AMD1P17707 334 aa4.43□□□□□ -1.7
SF3B1-207ENST00000468925 HNF1AP20823 631 aa4.43□□□□□ -1.7
SF3B1-207ENST00000468925 CTSSP25774 331 aa4.43□□□□□ -1.7
SF3B1-207ENST00000468925 PRDX3P30048 256 aaKnown RBP4.43□□□□□ -1.7
SF3B1-207ENST00000468925 TM4SF1P30408 202 aa4.43□□□□□ -1.7
SF3B1-207ENST00000468925 MC4RP32245 332 aa4.43□□□□□ -1.7
SF3B1-207ENST00000468925 CD80P33681 288 aa4.43□□□□□ -1.7
SF3B1-207ENST00000468925 CASRP41180 1078 aa4.43□□□□□ -1.7
SF3B1-207ENST00000468925 KIR2DL1P43626 348 aaPredicted RBP4.43□□□□□ -1.7
SF3B1-207ENST00000468925 KIR2DL2P43627 348 aaPredicted RBP4.43□□□□□ -1.7
SF3B1-207ENST00000468925 H2BFSP57053 126 aa4.43□□□□□ -1.7
SF3B1-207ENST00000468925 SOX8P57073 446 aa4.43□□□□□ -1.7
SF3B1-207ENST00000468925 KLF3P57682 345 aaPredicted RBP4.43□□□□□ -1.7
SF3B1-207ENST00000468925 KRTAP10-2P60368 255 aa4.43□□□□□ -1.7
SF3B1-207ENST00000468925 OSTNP61366 133 aa4.43□□□□□ -1.7
SF3B1-207ENST00000468925 ST8SIA6P61647 398 aa4.43□□□□□ -1.7
SF3B1-207ENST00000468925 LSM6P62312 80 aaKnown RBP4.43□□□□□ -1.7
SF3B1-207ENST00000468925 ACTA2P62736 377 aa4.43□□□□□ -1.7
SF3B1-207ENST00000468925 ACTG2P63267 376 aa4.43□□□□□ -1.7
SF3B1-207ENST00000468925 RPP30P78346 268 aaKnown RBP4.43□□□□□ -1.7
SF3B1-207ENST00000468925 DGCR2P98153 550 aa4.43□□□□□ -1.7
SF3B1-207ENST00000468925 TIAL1Q01085 375 aaKnown RBP eCLIP4.43□□□□□ -1.7
SF3B1-207ENST00000468925 OC90Q02509 493 aaPredicted RBP4.43□□□□□ -1.7
SF3B1-207ENST00000468925 TLE2Q04725 743 aa4.43□□□□□ -1.7
SF3B1-207ENST00000468925 SPOCK1Q08629 439 aa4.43□□□□□ -1.7
SF3B1-207ENST00000468925 LMAN2Q12907 356 aa4.43□□□□□ -1.7
SF3B1-207ENST00000468925 GINS1Q14691 196 aa4.43□□□□□ -1.7
SF3B1-207ENST00000468925 TEAD2Q15562 447 aa4.43□□□□□ -1.7
SF3B1-207ENST00000468925 SMAD1Q15797 465 aaKnown RBP4.43□□□□□ -1.7
SF3B1-207ENST00000468925 UBE2V2Q15819 145 aa4.43□□□□□ -1.7
SF3B1-207ENST00000468925 ISXQ2M1V0 245 aa4.43□□□□□ -1.7
SF3B1-207ENST00000468925 SPDYE7PQ495Y7 208 aa4.43□□□□□ -1.7
SF3B1-207ENST00000468925 ZNF789Q5FWF6 425 aa4.43□□□□□ -1.7
SF3B1-207ENST00000468925 UBXN11Q5T124 520 aa4.43□□□□□ -1.7
SF3B1-207ENST00000468925 PRAMEF18Q5VWM3 479 aa4.43□□□□□ -1.7
SF3B1-207ENST00000468925 ADAM5Q6NVV9 412 aa4.43□□□□□ -1.7
SF3B1-207ENST00000468925 NOXRED1Q6NXP6 359 aa4.43□□□□□ -1.7
SF3B1-207ENST00000468925 SCIMPQ6UWF3 145 aa4.43□□□□□ -1.7
SF3B1-207ENST00000468925 CEACAM20Q6UY09 585 aa4.43□□□□□ -1.7
SF3B1-207ENST00000468925 HEPN1Q6WQI6 88 aa4.43□□□□□ -1.7
SF3B1-207ENST00000468925 FBXW12Q6X9E4 464 aa4.43□□□□□ -1.7
SF3B1-207ENST00000468925 SMIM5Q71RC9 77 aa4.43□□□□□ -1.7
SF3B1-207ENST00000468925 DPPA4Q7L190 304 aa4.43□□□□□ -1.7
SF3B1-207ENST00000468925 PIM3Q86V86 326 aa4.43□□□□□ -1.7
SF3B1-207ENST00000468925 SYT12Q8IV01 421 aa4.43□□□□□ -1.7
SF3B1-207ENST00000468925 GLB1L2Q8IW92 636 aa4.43□□□□□ -1.7
SF3B1-207ENST00000468925 GPC2Q8N158 579 aa4.43□□□□□ -1.7
SF3B1-207ENST00000468925 UMODL1-AS1Q8N2C9 162 aa4.43□□□□□ -1.7
SF3B1-207ENST00000468925 LRRC18Q8N456 261 aa4.43□□□□□ -1.7
SF3B1-207ENST00000468925 BPIFB2Q8N4F0 458 aa4.43□□□□□ -1.7
SF3B1-207ENST00000468925 TEX26Q8N6G2 289 aa4.43□□□□□ -1.7
SF3B1-207ENST00000468925 HORMAD2Q8N7B1 307 aa4.43□□□□□ -1.7
SF3B1-207ENST00000468925 RELL2Q8NC24 303 aaPredicted RBP4.43□□□□□ -1.7
SF3B1-207ENST00000468925 LINC00116Q8NCU8 138 aa4.43□□□□□ -1.7
SF3B1-207ENST00000468925 OR52B6Q8NGF0 335 aa4.43□□□□□ -1.7
SF3B1-207ENST00000468925 OR51G2Q8NGK0 314 aa4.43□□□□□ -1.7
SF3B1-207ENST00000468925 OR10D4PQ8NGN7 298 aa4.43□□□□□ -1.7
SF3B1-207ENST00000468925 OR51Q1Q8NH59 317 aa4.43□□□□□ -1.7
SF3B1-207ENST00000468925 OR52J3Q8NH60 311 aa4.43□□□□□ -1.7
SF3B1-207ENST00000468925 LYPD6BQ8NI32 183 aa4.43□□□□□ -1.7
SF3B1-207ENST00000468925 ADAMTS15Q8TE58 950 aa4.43□□□□□ -1.7
SF3B1-207ENST00000468925 FGF11Q92914 225 aa4.43□□□□□ -1.7
SF3B1-207ENST00000468925 GCDHQ92947 438 aaPredicted RBP4.43□□□□□ -1.7
SF3B1-207ENST00000468925 RAB39BQ96DA2 213 aa4.43□□□□□ -1.7
SF3B1-207ENST00000468925 MASTLQ96GX5 879 aa4.43□□□□□ -1.7
SF3B1-207ENST00000468925 ADGRG7Q96K78 797 aa4.43□□□□□ -1.7
SF3B1-207ENST00000468925 OR2M4Q96R27 311 aa4.43□□□□□ -1.7
SF3B1-207ENST00000468925 F2RL3Q96RI0 385 aa4.43□□□□□ -1.7
SF3B1-207ENST00000468925 MICU1Q9BPX6 476 aa4.43□□□□□ -1.7
SF3B1-207ENST00000468925 NMES1Q9C002 83 aa4.43□□□□□ -1.7
SF3B1-207ENST00000468925 TRIM2Q9C040 744 aa4.43□□□□□ -1.7
SF3B1-207ENST00000468925 OR8D2Q9GZM6 311 aa4.43□□□□□ -1.7
SF3B1-207ENST00000468925 OR51B6Q9H340 312 aa4.43□□□□□ -1.7
SF3B1-207ENST00000468925 EPHX3Q9H6B9 360 aa4.43□□□□□ -1.7
SF3B1-207ENST00000468925 SEPSECSQ9HD40 501 aaKnown RBP4.43□□□□□ -1.7
SF3B1-207ENST00000468925 ACKR4Q9NPB9 350 aa4.43□□□□□ -1.7
SF3B1-207ENST00000468925 A4GALTQ9NPC4 353 aa4.43□□□□□ -1.7
SF3B1-207ENST00000468925 OBP2BQ9NPH6 170 aa4.43□□□□□ -1.7
SF3B1-207ENST00000468925 CA10Q9NS85 328 aa4.43□□□□□ -1.7
SF3B1-207ENST00000468925 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.43□□□□□ -1.7
SF3B1-207ENST00000468925 TMEM242Q9NWH2 141 aa4.43□□□□□ -1.7
SF3B1-207ENST00000468925 DOK5Q9P104 306 aa4.43□□□□□ -1.7
SF3B1-207ENST00000468925 VAX2Q9UIW0 290 aa4.43□□□□□ -1.7
SF3B1-207ENST00000468925 KCNG2Q9UJ96 466 aa4.43□□□□□ -1.7
SF3B1-207ENST00000468925 ICKQ9UPZ9 632 aa4.43□□□□□ -1.7
SF3B1-207ENST00000468925 MOKQ9UQ07 419 aa4.43□□□□□ -1.7
SF3B1-207ENST00000468925 SLC27A6Q9Y2P4 619 aa4.43□□□□□ -1.7
SF3B1-207ENST00000468925 MRPS18CQ9Y3D5 142 aaKnown RBP4.43□□□□□ -1.7
SF3B1-207ENST00000468925 ZNF236Q9UL36 1845 aa4.43□□□□□ -1.7
SF3B1-207ENST00000468925 SCN8AQ9UQD0 1980 aa4.43□□□□□ -1.7
SF3B1-207ENST00000468925 COL11A1P12107 1806 aaPredicted RBP4.42□□□□□ -1.7
SF3B1-207ENST00000468925 TP53BP1Q12888 1972 aaPredicted RBP4.42□□□□□ -1.7
SF3B1-207ENST00000468925 A0A0A6YYH2 397 aa4.42□□□□□ -1.7
SF3B1-207ENST00000468925 A0A0B4J2A0 478 aa4.42□□□□□ -1.7
SF3B1-207ENST00000468925 IGKV6-21A0A0C4DH24 114 aa4.42□□□□□ -1.7
SF3B1-207ENST00000468925 A0A0G2JK05 382 aa4.42□□□□□ -1.7
SF3B1-207ENST00000468925 A0A1W2PPC4 97 aa4.42□□□□□ -1.7
SF3B1-207ENST00000468925 TCRBV21S2A2A0A5A6 115 aa4.42□□□□□ -1.7
SF3B1-207ENST00000468925 LRRC14BA6NHZ5 514 aa4.42□□□□□ -1.7
SF3B1-207ENST00000468925 A6NJ64 397 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms