RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 TMEM8BA6NDV4 472 aa3.64□□□□□ -1.83
TMEM39A-204ENST00000468545 NPIPA2E9PIF3 369 aa3.64□□□□□ -1.83
TMEM39A-204ENST00000468545 NPIPA3F8WFD2 350 aa3.64□□□□□ -1.83
TMEM39A-204ENST00000468545 H0YC42 278 aa3.64□□□□□ -1.83
TMEM39A-204ENST00000468545 SULT2B1O00204 365 aa3.64□□□□□ -1.83
TMEM39A-204ENST00000468545 CDC42EP2O14613 210 aa3.64□□□□□ -1.83
TMEM39A-204ENST00000468545 TNFSF11O14788 317 aa3.64□□□□□ -1.83
TMEM39A-204ENST00000468545 RNF13O43567 381 aa3.64□□□□□ -1.83
TMEM39A-204ENST00000468545 CXCL13O43927 109 aa3.64□□□□□ -1.83
TMEM39A-204ENST00000468545 OR7A10O76100 309 aa3.64□□□□□ -1.83
TMEM39A-204ENST00000468545 AKR7A3O95154 331 aa3.64□□□□□ -1.83
TMEM39A-204ENST00000468545 CLIC3O95833 236 aa3.64□□□□□ -1.83
TMEM39A-204ENST00000468545 HPRP00739 348 aa3.64□□□□□ -1.83
TMEM39A-204ENST00000468545 PLGP00747 810 aaPredicted RBP3.64□□□□□ -1.83
TMEM39A-204ENST00000468545 ADAP00813 363 aa3.64□□□□□ -1.83
TMEM39A-204ENST00000468545 BGLAPP02818 100 aa3.64□□□□□ -1.83
TMEM39A-204ENST00000468545 ALPLP05186 524 aa3.64□□□□□ -1.83
TMEM39A-204ENST00000468545 HPNP05981 417 aa3.64□□□□□ -1.83
TMEM39A-204ENST00000468545 ZNF24P17028 368 aa3.64□□□□□ -1.83
TMEM39A-204ENST00000468545 CDH2P19022 906 aaPredicted RBP3.64□□□□□ -1.83
TMEM39A-204ENST00000468545 GSTM3P21266 225 aa3.64□□□□□ -1.83
TMEM39A-204ENST00000468545 SHC1P29353 583 aa3.64□□□□□ -1.83
TMEM39A-204ENST00000468545 GRPRP30550 384 aa3.64□□□□□ -1.83
TMEM39A-204ENST00000468545 IDUAP35475 653 aa3.64□□□□□ -1.83
TMEM39A-204ENST00000468545 RPL4P36578 427 aaKnown RBP3.64□□□□□ -1.83
TMEM39A-204ENST00000468545 AQP2P41181 271 aa3.64□□□□□ -1.83
TMEM39A-204ENST00000468545 EIF1P41567 113 aaKnown RBP3.64□□□□□ -1.83
TMEM39A-204ENST00000468545 RBM34P42696 430 aaKnown RBP3.64□□□□□ -1.83
TMEM39A-204ENST00000468545 SUCLG1P53597 346 aaKnown RBP3.64□□□□□ -1.83
TMEM39A-204ENST00000468545 CRISP1P54107 249 aa3.64□□□□□ -1.83
TMEM39A-204ENST00000468545 MLLT10P55197 1068 aa3.64□□□□□ -1.83
TMEM39A-204ENST00000468545 CLDN20P56880 219 aa3.64□□□□□ -1.83
TMEM39A-204ENST00000468545 CARD18P57730 90 aa3.64□□□□□ -1.83
TMEM39A-204ENST00000468545 NUP107P57740 925 aa3.64□□□□□ -1.83
TMEM39A-204ENST00000468545 B3GALT5-AS1P59052 145 aa3.64□□□□□ -1.83
TMEM39A-204ENST00000468545 ERVK-25P63136 954 aa3.64□□□□□ -1.83
TMEM39A-204ENST00000468545 PPP2R2BQ00005 443 aa3.64□□□□□ -1.83
TMEM39A-204ENST00000468545 HSF1Q00613 529 aa3.64□□□□□ -1.83
TMEM39A-204ENST00000468545 EGR4Q05215 589 aa3.64□□□□□ -1.83
TMEM39A-204ENST00000468545 NPRL3Q12980 569 aa3.64□□□□□ -1.83
TMEM39A-204ENST00000468545 TSPAN31Q12999 210 aa3.64□□□□□ -1.83
TMEM39A-204ENST00000468545 PMS2P3Q13401 168 aa3.64□□□□□ -1.83
TMEM39A-204ENST00000468545 LY6DQ14210 128 aa3.64□□□□□ -1.83
TMEM39A-204ENST00000468545 GK3PQ14409 553 aa3.64□□□□□ -1.83
TMEM39A-204ENST00000468545 GINS1Q14691 196 aa3.64□□□□□ -1.83
TMEM39A-204ENST00000468545 TAF11Q15544 211 aa3.64□□□□□ -1.83
TMEM39A-204ENST00000468545 C3AR1Q16581 482 aa3.64□□□□□ -1.83
TMEM39A-204ENST00000468545 SGCBQ16585 318 aa3.64□□□□□ -1.83
TMEM39A-204ENST00000468545 ZNF74Q16587 644 aa3.64□□□□□ -1.83
TMEM39A-204ENST00000468545 SLC36A3Q495N2 470 aa3.64□□□□□ -1.83
TMEM39A-204ENST00000468545 GLYR1Q49A26 553 aaPredicted RBP3.64□□□□□ -1.83
TMEM39A-204ENST00000468545 ZBED5Q49AG3 693 aa3.64□□□□□ -1.83
TMEM39A-204ENST00000468545 SLC25A53Q5H9E4 307 aa3.64□□□□□ -1.83
TMEM39A-204ENST00000468545 WLSQ5T9L3 541 aa3.64□□□□□ -1.83
TMEM39A-204ENST00000468545 KDM4DQ6B0I6 523 aa3.64□□□□□ -1.83
TMEM39A-204ENST00000468545 HBMQ6B0K9 141 aa3.64□□□□□ -1.83
TMEM39A-204ENST00000468545 ZNF770Q6IQ21 691 aaPredicted RBP3.64□□□□□ -1.83
TMEM39A-204ENST00000468545 FAHD1Q6P587 224 aa3.64□□□□□ -1.83
TMEM39A-204ENST00000468545 ANKRD16Q6P6B7 361 aa3.64□□□□□ -1.83
TMEM39A-204ENST00000468545 KLHL17Q6TDP4 642 aa3.64□□□□□ -1.83
TMEM39A-204ENST00000468545 PLXDC2Q6UX71 529 aa3.64□□□□□ -1.83
TMEM39A-204ENST00000468545 IGFL3Q6UXB1 125 aa3.64□□□□□ -1.83
TMEM39A-204ENST00000468545 Q6ZS92 163 aa3.64□□□□□ -1.83
TMEM39A-204ENST00000468545 CHMP1BQ7LBR1 199 aa3.64□□□□□ -1.83
TMEM39A-204ENST00000468545 OAFQ86UD1 273 aa3.64□□□□□ -1.83
TMEM39A-204ENST00000468545 GHDCQ8N2G8 530 aa3.64□□□□□ -1.83
TMEM39A-204ENST00000468545 GTPBP8Q8N3Z3 284 aaPredicted RBP3.64□□□□□ -1.83
TMEM39A-204ENST00000468545 IQCF1Q8N6M8 205 aa3.64□□□□□ -1.83
TMEM39A-204ENST00000468545 PACRGLQ8N7B6 248 aa3.64□□□□□ -1.83
TMEM39A-204ENST00000468545 TMEM99Q8N816 258 aa3.64□□□□□ -1.83
TMEM39A-204ENST00000468545 EXD3Q8N9H8 876 aa3.64□□□□□ -1.83
TMEM39A-204ENST00000468545 MOSPD2Q8NHP6 518 aa3.64□□□□□ -1.83
TMEM39A-204ENST00000468545 TEX47Q8TBZ9 253 aa3.64□□□□□ -1.83
TMEM39A-204ENST00000468545 ROBO4Q8WZ75 1007 aa3.64□□□□□ -1.83
TMEM39A-204ENST00000468545 OSTF1Q92882 214 aa3.64□□□□□ -1.83
TMEM39A-204ENST00000468545 ABTB1Q969K4 478 aaPredicted RBP3.64□□□□□ -1.83
TMEM39A-204ENST00000468545 ZNF566Q969W8 418 aa3.64□□□□□ -1.83
TMEM39A-204ENST00000468545 NTNG2Q96CW9 530 aa3.64□□□□□ -1.83
TMEM39A-204ENST00000468545 DTNBP1Q96EV8 351 aa3.64□□□□□ -1.83
TMEM39A-204ENST00000468545 ARL5BQ96KC2 179 aa3.64□□□□□ -1.83
TMEM39A-204ENST00000468545 CNBD2Q96M20 576 aa3.64□□□□□ -1.83
TMEM39A-204ENST00000468545 ZNF570Q96NI8 536 aa3.64□□□□□ -1.83
TMEM39A-204ENST00000468545 MBOAT4Q96T53 435 aa3.64□□□□□ -1.83
TMEM39A-204ENST00000468545 FUZQ9BT04 418 aa3.64□□□□□ -1.83
TMEM39A-204ENST00000468545 IFT27Q9BW83 186 aa3.64□□□□□ -1.83
TMEM39A-204ENST00000468545 TSSK6Q9BXA6 273 aa3.64□□□□□ -1.83
TMEM39A-204ENST00000468545 DGCR6LQ9BY27 220 aa3.64□□□□□ -1.83
TMEM39A-204ENST00000468545 PRRG4Q9BZD6 226 aa3.64□□□□□ -1.83
TMEM39A-204ENST00000468545 GABARAPL1Q9H0R8 117 aa3.64□□□□□ -1.83
TMEM39A-204ENST00000468545 SLC25A32Q9H2D1 315 aa3.64□□□□□ -1.83
TMEM39A-204ENST00000468545 ANKRD19PQ9H560 264 aa3.64□□□□□ -1.83
TMEM39A-204ENST00000468545 PRORYQ9H606 182 aa3.64□□□□□ -1.83
TMEM39A-204ENST00000468545 C12orf10Q9HB07 376 aa3.64□□□□□ -1.83
TMEM39A-204ENST00000468545 TRIM36Q9NQ86 728 aa3.64□□□□□ -1.83
TMEM39A-204ENST00000468545 NANSQ9NR45 359 aa3.64□□□□□ -1.83
TMEM39A-204ENST00000468545 FAM118AQ9NWS6 357 aa3.64□□□□□ -1.83
TMEM39A-204ENST00000468545 SMPD3Q9NY59 655 aaPredicted RBP3.64□□□□□ -1.83
TMEM39A-204ENST00000468545 TVP23BQ9NYZ1 205 aa3.64□□□□□ -1.83
TMEM39A-204ENST00000468545 USE1Q9NZ43 259 aa3.64□□□□□ -1.83
TMEM39A-204ENST00000468545 KLHL13Q9P2N7 655 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms