RNA–Protein interactions for RNA: ENST00000468477.1

CDHR3-206, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 482 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-206ENST00000468477 DHX35Q9H5Z1 703 aaKnown RBP3.2□□□□□ -1.9
CDHR3-206ENST00000468477 C3orf14Q9HBI5 128 aa3.2□□□□□ -1.9
CDHR3-206ENST00000468477 C6orf50Q9HD87 102 aa3.2□□□□□ -1.9
CDHR3-206ENST00000468477 UBE2TQ9NPD8 197 aaPredicted RBP3.2□□□□□ -1.9
CDHR3-206ENST00000468477 SDHAF2Q9NX18 166 aa3.2□□□□□ -1.9
CDHR3-206ENST00000468477 ENOPH1Q9UHY7 261 aa3.2□□□□□ -1.9
CDHR3-206ENST00000468477 UBQLN1Q9UMX0 589 aaKnown RBP3.2□□□□□ -1.9
CDHR3-206ENST00000468477 SCML2Q9UQR0 700 aa3.2□□□□□ -1.9
CDHR3-206ENST00000468477 KCNIP3Q9Y2W7 256 aa3.2□□□□□ -1.9
CDHR3-206ENST00000468477 EXOSC1Q9Y3B2 195 aaKnown RBP3.2□□□□□ -1.9
CDHR3-206ENST00000468477 NUP155O75694 1391 aa3.2□□□□□ -1.9
CDHR3-206ENST00000468477 EIF3AQ14152 1382 aaKnown RBP3.2□□□□□ -1.9
CDHR3-206ENST00000468477 MROH7Q68CQ1 1323 aa3.19□□□□□ -1.9
CDHR3-206ENST00000468477 A0A0G2JK05 382 aa3.19□□□□□ -1.9
CDHR3-206ENST00000468477 A0A1B0GV72 72 aa3.19□□□□□ -1.9
CDHR3-206ENST00000468477 hDV102S1A0JD36 115 aa3.19□□□□□ -1.9
CDHR3-206ENST00000468477 TSPAN11A1L157 253 aa3.19□□□□□ -1.9
CDHR3-206ENST00000468477 FAM231BA6NCW3 169 aa3.19□□□□□ -1.9
CDHR3-206ENST00000468477 SRRM3A6NNA2 597 aaPredicted RBP3.19□□□□□ -1.9
CDHR3-206ENST00000468477 LINC00473A8K010 186 aa3.19□□□□□ -1.9
CDHR3-206ENST00000468477 EFCAB7A8K855 629 aa3.19□□□□□ -1.9
CDHR3-206ENST00000468477 SEC14L6B5MCN3 397 aa3.19□□□□□ -1.9
CDHR3-206ENST00000468477 F5H5T6 163 aa3.19□□□□□ -1.9
CDHR3-206ENST00000468477 H3BMQ9 156 aa3.19□□□□□ -1.9
CDHR3-206ENST00000468477 J3QLI3 93 aa3.19□□□□□ -1.9
CDHR3-206ENST00000468477 HSD17B6O14756 317 aa3.19□□□□□ -1.9
CDHR3-206ENST00000468477 SLC31A1O15431 190 aa3.19□□□□□ -1.9
CDHR3-206ENST00000468477 ITM2AO43736 263 aa3.19□□□□□ -1.9
CDHR3-206ENST00000468477 MPZL2O60487 215 aa3.19□□□□□ -1.9
CDHR3-206ENST00000468477 MAGEC1O60732 1142 aa3.19□□□□□ -1.9
CDHR3-206ENST00000468477 CTNSO60931 367 aa3.19□□□□□ -1.9
CDHR3-206ENST00000468477 KHDRBS3O75525 346 aaKnown RBP3.19□□□□□ -1.9
CDHR3-206ENST00000468477 CTDNEP1O95476 244 aa3.19□□□□□ -1.9
CDHR3-206ENST00000468477 TDP2O95551 362 aa3.19□□□□□ -1.9
CDHR3-206ENST00000468477 SNAP29O95721 258 aa3.19□□□□□ -1.9
CDHR3-206ENST00000468477 RAB36O95755 333 aa3.19□□□□□ -1.9
CDHR3-206ENST00000468477 CLIC3O95833 236 aa3.19□□□□□ -1.9
CDHR3-206ENST00000468477 TIMP1P01033 207 aa3.19□□□□□ -1.9
CDHR3-206ENST00000468477 IGHG4P01861 327 aa3.19□□□□□ -1.9
CDHR3-206ENST00000468477 THRAP10827 490 aa3.19□□□□□ -1.9
CDHR3-206ENST00000468477 SLC2A1P11166 492 aa3.19□□□□□ -1.9
CDHR3-206ENST00000468477 GP1BBP13224 206 aa3.19□□□□□ -1.9
CDHR3-206ENST00000468477 CHRNB2P17787 502 aa3.19□□□□□ -1.9
CDHR3-206ENST00000468477 FOXN2P32314 431 aa3.19□□□□□ -1.9
CDHR3-206ENST00000468477 RPL4P36578 427 aaKnown RBP3.19□□□□□ -1.9
CDHR3-206ENST00000468477 RPL3P39023 403 aaKnown RBP3.19□□□□□ -1.9
CDHR3-206ENST00000468477 IDH3GP51553 393 aaPredicted RBP3.19□□□□□ -1.9
CDHR3-206ENST00000468477 B3GALT5-AS1P59052 145 aa3.19□□□□□ -1.9
CDHR3-206ENST00000468477 RPL27P61353 136 aaKnown RBP3.19□□□□□ -1.9
CDHR3-206ENST00000468477 FAM3AP98173 230 aa3.19□□□□□ -1.9
CDHR3-206ENST00000468477 POU3F1Q03052 451 aaPredicted RBP3.19□□□□□ -1.9
CDHR3-206ENST00000468477 TNFRSF9Q07011 255 aa3.19□□□□□ -1.9
CDHR3-206ENST00000468477 RAB40BQ12829 278 aa3.19□□□□□ -1.9
CDHR3-206ENST00000468477 DYNC1I2Q13409 638 aaKnown RBP3.19□□□□□ -1.9
CDHR3-206ENST00000468477 IL18R1Q13478 541 aa3.19□□□□□ -1.9
CDHR3-206ENST00000468477 AQP6Q13520 282 aa3.19□□□□□ -1.9
CDHR3-206ENST00000468477 ITPK1Q13572 414 aa3.19□□□□□ -1.9
CDHR3-206ENST00000468477 TRIM16LQ309B1 348 aa3.19□□□□□ -1.9
CDHR3-206ENST00000468477 MIDNQ504T8 468 aa3.19□□□□□ -1.9
CDHR3-206ENST00000468477 MARC1Q5VT66 337 aa3.19□□□□□ -1.9
CDHR3-206ENST00000468477 SYPL2Q5VXT5 272 aa3.19□□□□□ -1.9
CDHR3-206ENST00000468477 TRIQKQ629K1 86 aa3.19□□□□□ -1.9
CDHR3-206ENST00000468477 FAM45BPQ6NSW5 357 aa3.19□□□□□ -1.9
CDHR3-206ENST00000468477 NIPAL1Q6NVV3 410 aa3.19□□□□□ -1.9
CDHR3-206ENST00000468477 ZNF544Q6NX49 715 aa3.19□□□□□ -1.9
CDHR3-206ENST00000468477 RBMS3Q6XE24 437 aaKnown RBP3.19□□□□□ -1.9
CDHR3-206ENST00000468477 SLC25A48Q6ZT89 311 aaKnown RBP3.19□□□□□ -1.9
CDHR3-206ENST00000468477 DPPA2Q7Z7J5 298 aa3.19□□□□□ -1.9
CDHR3-206ENST00000468477 MYPOPQ86VE0 399 aaPredicted RBP3.19□□□□□ -1.9
CDHR3-206ENST00000468477 CLVS1Q8IUQ0 354 aaPredicted RBP3.19□□□□□ -1.9
CDHR3-206ENST00000468477 PUSL1Q8N0Z8 303 aaKnown RBP3.19□□□□□ -1.9
CDHR3-206ENST00000468477 STK40Q8N2I9 435 aa3.19□□□□□ -1.9
CDHR3-206ENST00000468477 OR2L13Q8N349 312 aa3.19□□□□□ -1.9
CDHR3-206ENST00000468477 STPG2Q8N412 459 aa3.19□□□□□ -1.9
CDHR3-206ENST00000468477 IQCF1Q8N6M8 205 aa3.19□□□□□ -1.9
CDHR3-206ENST00000468477 TCEANCQ8N8B7 351 aa3.19□□□□□ -1.9
CDHR3-206ENST00000468477 VN1R2Q8NFZ6 395 aa3.19□□□□□ -1.9
CDHR3-206ENST00000468477 OR11L1Q8NGX0 322 aa3.19□□□□□ -1.9
CDHR3-206ENST00000468477 OR52N5Q8NH56 324 aa3.19□□□□□ -1.9
CDHR3-206ENST00000468477 OR51A7Q8NH64 312 aa3.19□□□□□ -1.9
CDHR3-206ENST00000468477 OR2AE1Q8NHA4 323 aa3.19□□□□□ -1.9
CDHR3-206ENST00000468477 OR5K2Q8NHB8 316 aa3.19□□□□□ -1.9
CDHR3-206ENST00000468477 FBXO25Q8TCJ0 367 aa3.19□□□□□ -1.9
CDHR3-206ENST00000468477 RAB3CQ96E17 227 aa3.19□□□□□ -1.9
CDHR3-206ENST00000468477 CPXM1Q96SM3 734 aa3.19□□□□□ -1.9
CDHR3-206ENST00000468477 ATF6BQ99941 703 aa3.19□□□□□ -1.9
CDHR3-206ENST00000468477 NIPSNAP1Q9BPW8 284 aa3.19□□□□□ -1.9
CDHR3-206ENST00000468477 PSD2Q9BQI7 771 aa3.19□□□□□ -1.9
CDHR3-206ENST00000468477 CABLES2Q9BTV7 478 aa3.19□□□□□ -1.9
CDHR3-206ENST00000468477 TMEM109Q9BVC6 243 aa3.19□□□□□ -1.9
CDHR3-206ENST00000468477 ARL6Q9H0F7 186 aa3.19□□□□□ -1.9
CDHR3-206ENST00000468477 PCBD2Q9H0N5 130 aa3.19□□□□□ -1.9
CDHR3-206ENST00000468477 GLIPR2Q9H4G4 154 aa3.19□□□□□ -1.9
CDHR3-206ENST00000468477 ZDHHC4Q9NPG8 344 aa3.19□□□□□ -1.9
CDHR3-206ENST00000468477 HRASLS2Q9NWW9 162 aa3.19□□□□□ -1.9
CDHR3-206ENST00000468477 TEX10Q9NXF1 929 aaPredicted RBP3.19□□□□□ -1.9
CDHR3-206ENST00000468477 SLC25A37Q9NYZ2 338 aa3.19□□□□□ -1.9
CDHR3-206ENST00000468477 TMEM9Q9P0T7 183 aa3.19□□□□□ -1.9
CDHR3-206ENST00000468477 SLC17A6Q9P2U8 582 aa3.19□□□□□ -1.9
CDHR3-206ENST00000468477 SLC7A7Q9UM01 511 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms