RNA–Protein interactions for RNA: ENST00000467560.5

ATPAF2-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 2

Gene ATPAF2, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-204ENST00000467560 TGFAP01135 160 aa12.69□□□□□ -0.38
ATPAF2-204ENST00000467560 HPXP02790 462 aa12.69□□□□□ -0.38
ATPAF2-204ENST00000467560 F13BP05160 661 aa12.69□□□□□ -0.38
ATPAF2-204ENST00000467560 QDPRP09417 244 aa12.69□□□□□ -0.38
ATPAF2-204ENST00000467560 CCL2P13500 99 aa12.69□□□□□ -0.38
ATPAF2-204ENST00000467560 FUT1P19526 365 aa12.69□□□□□ -0.38
ATPAF2-204ENST00000467560 GLRXP35754 106 aa12.69□□□□□ -0.38
ATPAF2-204ENST00000467560 OR1E2P47887 323 aa12.69□□□□□ -0.38
ATPAF2-204ENST00000467560 MYBPC1Q00872 1141 aa12.69□□□□□ -0.38
ATPAF2-204ENST00000467560 RPL18Q07020 188 aaKnown RBP12.69□□□□□ -0.38
ATPAF2-204ENST00000467560 KLF10Q13118 480 aa12.69□□□□□ -0.38
ATPAF2-204ENST00000467560 PIN1Q13526 163 aaPredicted RBP12.69□□□□□ -0.38
ATPAF2-204ENST00000467560 HIST3H3Q16695 136 aa12.69□□□□□ -0.38
ATPAF2-204ENST00000467560 ELFN2Q5R3F8 820 aa12.69□□□□□ -0.38
ATPAF2-204ENST00000467560 REP15Q6BDI9 236 aa12.69□□□□□ -0.38
ATPAF2-204ENST00000467560 FAM166AQ6J272 317 aa12.69□□□□□ -0.38
ATPAF2-204ENST00000467560 PIWIL3Q7Z3Z3 882 aaKnown RBP12.69□□□□□ -0.38
ATPAF2-204ENST00000467560 SLC30A8Q8IWU4 369 aa12.69□□□□□ -0.38
ATPAF2-204ENST00000467560 ZNF786Q8N393 782 aa12.69□□□□□ -0.38
ATPAF2-204ENST00000467560 SLC26A7Q8TE54 656 aa12.69□□□□□ -0.38
ATPAF2-204ENST00000467560 UBASH3BQ8TF42 649 aa12.69□□□□□ -0.38
ATPAF2-204ENST00000467560 NEU4Q8WWR8 484 aaPredicted RBP12.69□□□□□ -0.38
ATPAF2-204ENST00000467560 SLC25A44Q96H78 314 aaPredicted RBP12.69□□□□□ -0.38
ATPAF2-204ENST00000467560 MPP4Q96JB8 637 aa12.69□□□□□ -0.38
ATPAF2-204ENST00000467560 SNX18Q96RF0 628 aa12.69□□□□□ -0.38
ATPAF2-204ENST00000467560 REPIN1Q9BWE0 567 aaKnown RBP12.69□□□□□ -0.38
ATPAF2-204ENST00000467560 SLC19A3Q9BZV2 496 aa12.69□□□□□ -0.38
ATPAF2-204ENST00000467560 SAR1AQ9NR31 198 aa12.69□□□□□ -0.38
ATPAF2-204ENST00000467560 FGFR1OP2Q9NVK5 253 aa12.69□□□□□ -0.38
ATPAF2-204ENST00000467560 KCNS2Q9ULS6 477 aa12.69□□□□□ -0.38
ATPAF2-204ENST00000467560 BLOC1S5-TXNDC5H3BN57 136 aa12.68□□□□□ -0.38
ATPAF2-204ENST00000467560 MRASO14807 208 aa12.68□□□□□ -0.38
ATPAF2-204ENST00000467560 UBL3O95164 117 aa12.68□□□□□ -0.38
ATPAF2-204ENST00000467560 SERPINA5P05154 406 aa12.68□□□□□ -0.38
ATPAF2-204ENST00000467560 VIMP08670 466 aaKnown RBP12.68□□□□□ -0.38
ATPAF2-204ENST00000467560 TACSTD2P09758 323 aa12.68□□□□□ -0.38
ATPAF2-204ENST00000467560 UMPSP11172 480 aa12.68□□□□□ -0.38
ATPAF2-204ENST00000467560 COL8A2P25067 703 aa12.68□□□□□ -0.38
ATPAF2-204ENST00000467560 AQP2P41181 271 aa12.68□□□□□ -0.38
ATPAF2-204ENST00000467560 CYLC2Q14093 348 aaPredicted RBP12.68□□□□□ -0.38
ATPAF2-204ENST00000467560 KRTAP24-1Q3LI83 254 aa12.68□□□□□ -0.38
ATPAF2-204ENST00000467560 INTS11Q5TA45 600 aaKnown RBP12.68□□□□□ -0.38
ATPAF2-204ENST00000467560 DEF8Q6ZN54 512 aa12.68□□□□□ -0.38
ATPAF2-204ENST00000467560 NANOGNBQ7Z5D8 188 aa12.68□□□□□ -0.38
ATPAF2-204ENST00000467560 SYT14Q8NB59 555 aa12.68□□□□□ -0.38
ATPAF2-204ENST00000467560 OR4K5Q8NGD3 323 aa12.68□□□□□ -0.38
ATPAF2-204ENST00000467560 OR8J3Q8NGG0 315 aa12.68□□□□□ -0.38
ATPAF2-204ENST00000467560 MOSPD2Q8NHP6 518 aa12.68□□□□□ -0.38
ATPAF2-204ENST00000467560 C10orf82Q8WW14 230 aa12.68□□□□□ -0.38
ATPAF2-204ENST00000467560 SEPHS2Q99611 448 aa12.68□□□□□ -0.38
ATPAF2-204ENST00000467560 MRPL13Q9BYD1 178 aaKnown RBP12.68□□□□□ -0.38
ATPAF2-204ENST00000467560 LPAR3Q9UBY5 353 aa12.68□□□□□ -0.38
ATPAF2-204ENST00000467560 REV1Q9UBZ9 1251 aa12.68□□□□□ -0.38
ATPAF2-204ENST00000467560 RIMS3Q9UJD0 308 aa12.68□□□□□ -0.38
ATPAF2-204ENST00000467560 IGKV1D-43A0A0B4J1Z2 117 aa12.67□□□□□ -0.38
ATPAF2-204ENST00000467560 LOC100653049A0A140TA62 436 aa12.67□□□□□ -0.38
ATPAF2-204ENST00000467560 VSTM5A8MXK1 200 aa12.67□□□□□ -0.38
ATPAF2-204ENST00000467560 WNT9BO14905 357 aa12.67□□□□□ -0.38
ATPAF2-204ENST00000467560 SYNGR3O43761 229 aa12.67□□□□□ -0.38
ATPAF2-204ENST00000467560 PIP5K1CO60331 668 aa12.67□□□□□ -0.38
ATPAF2-204ENST00000467560 KRT34O76011 436 aa12.67□□□□□ -0.38
ATPAF2-204ENST00000467560 NCR1O76036 304 aa12.67□□□□□ -0.38
ATPAF2-204ENST00000467560 BCL10O95999 233 aa12.67□□□□□ -0.38
ATPAF2-204ENST00000467560 CLPTM1O96005 669 aa12.67□□□□□ -0.38
ATPAF2-204ENST00000467560 MT-ND1P03886 318 aa12.67□□□□□ -0.38
ATPAF2-204ENST00000467560 FAM157BP0CG42 384 aa12.67□□□□□ -0.38
ATPAF2-204ENST00000467560 OR8G3PP0DMU2 310 aa12.67□□□□□ -0.38
ATPAF2-204ENST00000467560 EVX1P49640 407 aa12.67□□□□□ -0.38
ATPAF2-204ENST00000467560 ERVS71-1P61550 626 aa12.67□□□□□ -0.38
ATPAF2-204ENST00000467560 ALKBH6Q3KRA9 238 aa12.67□□□□□ -0.38
ATPAF2-204ENST00000467560 SNX32Q86XE0 403 aa12.67□□□□□ -0.38
ATPAF2-204ENST00000467560 ZNF540Q8NDQ6 660 aa12.67□□□□□ -0.38
ATPAF2-204ENST00000467560 ASB10Q8WXI3 467 aa12.67□□□□□ -0.38
ATPAF2-204ENST00000467560 MCHR2Q969V1 340 aa12.67□□□□□ -0.38
ATPAF2-204ENST00000467560 NMD3Q96D46 503 aaKnown RBP12.67□□□□□ -0.38
ATPAF2-204ENST00000467560 TSPAN32Q96QS1 320 aa12.67□□□□□ -0.38
ATPAF2-204ENST00000467560 ECSITQ9BQ95 431 aa12.67□□□□□ -0.38
ATPAF2-204ENST00000467560 NSRP1Q9H0G5 558 aaKnown RBP12.67□□□□□ -0.38
ATPAF2-204ENST00000467560 OR51B6Q9H340 312 aa12.67□□□□□ -0.38
ATPAF2-204ENST00000467560 UGT2A1Q9Y4X1 527 aa12.67□□□□□ -0.38
ATPAF2-204ENST00000467560 M0R233 179 aa12.66□□□□□ -0.38
ATPAF2-204ENST00000467560 TRMUO75648 421 aaKnown RBP12.66□□□□□ -0.38
ATPAF2-204ENST00000467560 OR7A10O76100 309 aa12.66□□□□□ -0.38
ATPAF2-204ENST00000467560 OR5F1O95221 314 aa12.66□□□□□ -0.38
ATPAF2-204ENST00000467560 SLC2A10O95528 541 aa12.66□□□□□ -0.38
ATPAF2-204ENST00000467560 HIST1H2ABP04908 130 aa12.66□□□□□ -0.38
ATPAF2-204ENST00000467560 TSPAN19P0C672 248 aa12.66□□□□□ -0.38
ATPAF2-204ENST00000467560 NAT2P11245 290 aa12.66□□□□□ -0.38
ATPAF2-204ENST00000467560 SRD5A1P18405 259 aa12.66□□□□□ -0.38
ATPAF2-204ENST00000467560 APEX1P27695 318 aaKnown RBP12.66□□□□□ -0.38
ATPAF2-204ENST00000467560 LSP1P33241 339 aa12.66□□□□□ -0.38
ATPAF2-204ENST00000467560 ARFIP2P53365 341 aa12.66□□□□□ -0.38
ATPAF2-204ENST00000467560 TAS2R41P59536 307 aa12.66□□□□□ -0.38
ATPAF2-204ENST00000467560 FMODQ06828 376 aa12.66□□□□□ -0.38
ATPAF2-204ENST00000467560 CCNIQ14094 377 aa12.66□□□□□ -0.38
ATPAF2-204ENST00000467560 LAPTM4AQ15012 233 aa12.66□□□□□ -0.38
ATPAF2-204ENST00000467560 CR1LQ2VPA4 569 aa12.66□□□□□ -0.38
ATPAF2-204ENST00000467560 CYBRD1Q53TN4 286 aa12.66□□□□□ -0.38
ATPAF2-204ENST00000467560 COQ5Q5HYK3 327 aa12.66□□□□□ -0.38
ATPAF2-204ENST00000467560 ARMC4Q5T2S8 1044 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms