RNA–Protein interactions for RNA: ENST00000466704.1

CALD1-214, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 903 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-214ENST00000466704 LRRC39Q96DD0 335 aa2.86□□□□□ -1.95
CALD1-214ENST00000466704 SNF8Q96H20 258 aa2.86□□□□□ -1.95
CALD1-214ENST00000466704 ZNF514Q96K75 400 aaPredicted RBP2.86□□□□□ -1.95
CALD1-214ENST00000466704 GPR137Q96N19 417 aa2.86□□□□□ -1.95
CALD1-214ENST00000466704 ERP44Q9BS26 406 aa2.86□□□□□ -1.95
CALD1-214ENST00000466704 TIMM29Q9BSF4 260 aa2.86□□□□□ -1.95
CALD1-214ENST00000466704 PAXXQ9BUH6 204 aa2.86□□□□□ -1.95
CALD1-214ENST00000466704 RAB17Q9H0T7 212 aa2.86□□□□□ -1.95
CALD1-214ENST00000466704 DPH5Q9H2P9 285 aa2.86□□□□□ -1.95
CALD1-214ENST00000466704 SYNDIG1Q9H7V2 258 aa2.86□□□□□ -1.95
CALD1-214ENST00000466704 VPS37BQ9H9H4 285 aa2.86□□□□□ -1.95
CALD1-214ENST00000466704 MRM3Q9HC36 420 aaKnown RBP2.86□□□□□ -1.95
CALD1-214ENST00000466704 TREX1Q9NSU2 369 aa2.86□□□□□ -1.95
CALD1-214ENST00000466704 C20orf96Q9NUD7 363 aaPredicted RBP2.86□□□□□ -1.95
CALD1-214ENST00000466704 SLC23A2Q9UGH3 650 aa2.86□□□□□ -1.95
CALD1-214ENST00000466704 PSMD13Q9UNM6 376 aa2.86□□□□□ -1.95
CALD1-214ENST00000466704 UTP11Q9Y3A2 253 aaKnown RBP2.86□□□□□ -1.95
CALD1-214ENST00000466704 U3KQA8 63 aa2.86□□□□□ -1.95
CALD1-214ENST00000466704 MYOFQ9NZM1 2061 aa2.85□□□□□ -1.95
CALD1-214ENST00000466704 NPIPA5A0A0B4J1W7 369 aa2.85□□□□□ -1.95
CALD1-214ENST00000466704 MGAT4DA6NG13 374 aa2.85□□□□□ -1.95
CALD1-214ENST00000466704 OR5K4A6NMS3 321 aa2.85□□□□□ -1.95
CALD1-214ENST00000466704 OR52A4PA6NMU1 304 aa2.85□□□□□ -1.95
CALD1-214ENST00000466704 IQCF5A8MTL0 148 aa2.85□□□□□ -1.95
CALD1-214ENST00000466704 NPIPA5E9PKD4 350 aa2.85□□□□□ -1.95
CALD1-214ENST00000466704 PRMT5O14744 637 aaPredicted RBP2.85□□□□□ -1.95
CALD1-214ENST00000466704 ZW10O43264 779 aa2.85□□□□□ -1.95
CALD1-214ENST00000466704 OR1I1O60431 355 aa2.85□□□□□ -1.95
CALD1-214ENST00000466704 BANF1O75531 89 aa2.85□□□□□ -1.95
CALD1-214ENST00000466704 TTC4O95801 387 aa2.85□□□□□ -1.95
CALD1-214ENST00000466704 FTH1P02794 183 aa2.85□□□□□ -1.95
CALD1-214ENST00000466704 GP1BAP07359 652 aa2.85□□□□□ -1.95
CALD1-214ENST00000466704 SLC35G4P0C7Q5 338 aa2.85□□□□□ -1.95
CALD1-214ENST00000466704 LAMP1P11279 417 aa2.85□□□□□ -1.95
CALD1-214ENST00000466704 PGAM1P18669 254 aa2.85□□□□□ -1.95
CALD1-214ENST00000466704 XRCC1P18887 633 aaPredicted RBP2.85□□□□□ -1.95
CALD1-214ENST00000466704 OGNP20774 298 aaKnown RBP2.85□□□□□ -1.95
CALD1-214ENST00000466704 CCR7P32248 378 aa2.85□□□□□ -1.95
CALD1-214ENST00000466704 SLC1A2P43004 574 aa2.85□□□□□ -1.95
CALD1-214ENST00000466704 PITPNBP48739 271 aa2.85□□□□□ -1.95
CALD1-214ENST00000466704 TTPAP49638 278 aa2.85□□□□□ -1.95
CALD1-214ENST00000466704 PRLHRP49683 370 aa2.85□□□□□ -1.95
CALD1-214ENST00000466704 PLTPP55058 493 aa2.85□□□□□ -1.95
CALD1-214ENST00000466704 CLDN6P56747 220 aa2.85□□□□□ -1.95
CALD1-214ENST00000466704 UBE2IP63279 158 aaKnown RBP2.85□□□□□ -1.95
CALD1-214ENST00000466704 CCL7P80098 99 aa2.85□□□□□ -1.95
CALD1-214ENST00000466704 CAV1Q03135 178 aa2.85□□□□□ -1.95
CALD1-214ENST00000466704 NPRL3Q12980 569 aa2.85□□□□□ -1.95
CALD1-214ENST00000466704 PDIA2Q13087 525 aaKnown RBP2.85□□□□□ -1.95
CALD1-214ENST00000466704 ZNF79Q15937 498 aa2.85□□□□□ -1.95
CALD1-214ENST00000466704 C2orf76Q3KRA6 126 aa2.85□□□□□ -1.95
CALD1-214ENST00000466704 HSP90AA5PQ58FG0 334 aa2.85□□□□□ -1.95
CALD1-214ENST00000466704 SPANXN3Q5MJ09 141 aa2.85□□□□□ -1.95
CALD1-214ENST00000466704 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.85□□□□□ -1.95
CALD1-214ENST00000466704 HES3Q5TGS1 186 aa2.85□□□□□ -1.95
CALD1-214ENST00000466704 DUPD1Q68J44 220 aa2.85□□□□□ -1.95
CALD1-214ENST00000466704 ZNF470Q6ECI4 717 aa2.85□□□□□ -1.95
CALD1-214ENST00000466704 PTRHD1Q6GMV3 140 aaKnown RBP2.85□□□□□ -1.95
CALD1-214ENST00000466704 WASH2PQ6VEQ5 465 aa2.85□□□□□ -1.95
CALD1-214ENST00000466704 RAPH1Q70E73 1250 aa2.85□□□□□ -1.95
CALD1-214ENST00000466704 CENPUQ71F23 418 aa2.85□□□□□ -1.95
CALD1-214ENST00000466704 C17orf82Q86X59 251 aaPredicted RBP2.85□□□□□ -1.95
CALD1-214ENST00000466704 MMGT1Q8N4V1 131 aa2.85□□□□□ -1.95
CALD1-214ENST00000466704 CEP112Q8N8E3 955 aa2.85□□□□□ -1.95
CALD1-214ENST00000466704 Q8N9G6 341 aaPredicted RBP2.85□□□□□ -1.95
CALD1-214ENST00000466704 FBXO36Q8NEA4 188 aa2.85□□□□□ -1.95
CALD1-214ENST00000466704 RFESDQ8TAC1 157 aa2.85□□□□□ -1.95
CALD1-214ENST00000466704 ELMO1Q92556 727 aa2.85□□□□□ -1.95
CALD1-214ENST00000466704 CXorf40BQ96DE9 158 aa2.85□□□□□ -1.95
CALD1-214ENST00000466704 PHYHIPLQ96FC7 376 aa2.85□□□□□ -1.95
CALD1-214ENST00000466704 CERS2Q96G23 380 aa2.85□□□□□ -1.95
CALD1-214ENST00000466704 C12orf66Q96MD2 445 aa2.85□□□□□ -1.95
CALD1-214ENST00000466704 EBNA1BP2Q99848 306 aaKnown RBP2.85□□□□□ -1.95
CALD1-214ENST00000466704 NAT9Q9BTE0 207 aa2.85□□□□□ -1.95
CALD1-214ENST00000466704 CARD6Q9BX69 1037 aa2.85□□□□□ -1.95
CALD1-214ENST00000466704 TSSK1BQ9BXA7 367 aa2.85□□□□□ -1.95
CALD1-214ENST00000466704 RDH14Q9HBH5 336 aa2.85□□□□□ -1.95
CALD1-214ENST00000466704 FBXO6Q9NRD1 293 aaPredicted RBP2.85□□□□□ -1.95
CALD1-214ENST00000466704 CENPMQ9NSP4 180 aa2.85□□□□□ -1.95
CALD1-214ENST00000466704 IMP3Q9NV31 184 aaKnown RBP2.85□□□□□ -1.95
CALD1-214ENST00000466704 COPS7AQ9UBW8 275 aa2.85□□□□□ -1.95
CALD1-214ENST00000466704 FBXO5Q9UKT4 447 aa2.85□□□□□ -1.95
CALD1-214ENST00000466704 CHMP2BQ9UQN3 213 aa2.85□□□□□ -1.95
CALD1-214ENST00000466704 NYNRINQ9P2P1 1898 aaKnown RBP2.85□□□□□ -1.95
CALD1-214ENST00000466704 LAMA1P25391 3075 aa2.84□□□□□ -1.95
CALD1-214ENST00000466704 ABCA7Q8IZY2 2146 aa2.84□□□□□ -1.95
CALD1-214ENST00000466704 SMG1Q96Q15 3661 aaKnown RBP2.84□□□□□ -1.95
CALD1-214ENST00000466704 IGHV1OR21-1A0A087WYE8 117 aa2.84□□□□□ -1.95
CALD1-214ENST00000466704 A0A0J9YVX5 310 aa2.84□□□□□ -1.95
CALD1-214ENST00000466704 SLC5A10A0PJK1 596 aa2.84□□□□□ -1.95
CALD1-214ENST00000466704 E5RI56 91 aa2.84□□□□□ -1.95
CALD1-214ENST00000466704 E7ESA3 106 aa2.84□□□□□ -1.95
CALD1-214ENST00000466704 LIN7AO14910 233 aaPredicted RBP2.84□□□□□ -1.95
CALD1-214ENST00000466704 CASC3O15234 703 aaKnown RBP2.84□□□□□ -1.95
CALD1-214ENST00000466704 EIF3HO15372 352 aaKnown RBP eCLIP2.84□□□□□ -1.95
CALD1-214ENST00000466704 DUX1O43812 170 aa2.84□□□□□ -1.95
CALD1-214ENST00000466704 GOSR1O95249 250 aa2.84□□□□□ -1.95
CALD1-214ENST00000466704 ZNF19P17023 458 aa2.84□□□□□ -1.95
CALD1-214ENST00000466704 RPS3P23396 243 aaKnown RBP eCLIP2.84□□□□□ -1.95
CALD1-214ENST00000466704 CD1CP29017 333 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms