RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 NPDC1Q9NQX5 325 aaPredicted RBP14.09□□□□□ -0.15
GPC1-207ENST00000466624 VSX1Q9NZR4 365 aaPredicted RBP14.09□□□□□ -0.15
GPC1-207ENST00000466624 PRSS37A4D1T9 235 aa14.08□□□□□ -0.16
GPC1-207ENST00000466624 C16orf97H3BN30 126 aa14.08□□□□□ -0.16
GPC1-207ENST00000466624 M0R3G1 203 aa14.08□□□□□ -0.16
GPC1-207ENST00000466624 SOCS2O14508 198 aa14.08□□□□□ -0.16
GPC1-207ENST00000466624 ARHGEF9O43307 516 aa14.08□□□□□ -0.16
GPC1-207ENST00000466624 MITFO75030 526 aaPredicted RBP14.08□□□□□ -0.16
GPC1-207ENST00000466624 ITGA5P08648 1049 aa14.08□□□□□ -0.16
GPC1-207ENST00000466624 CDH2P19022 906 aaPredicted RBP14.08□□□□□ -0.16
GPC1-207ENST00000466624 UGT2B10P36537 528 aa14.08□□□□□ -0.16
GPC1-207ENST00000466624 RAD23AP54725 363 aa14.08□□□□□ -0.16
GPC1-207ENST00000466624 TGFBR3Q03167 851 aa14.08□□□□□ -0.16
GPC1-207ENST00000466624 SLC34A1Q06495 639 aa14.08□□□□□ -0.16
GPC1-207ENST00000466624 LGALS3BPQ08380 585 aa14.08□□□□□ -0.16
GPC1-207ENST00000466624 FAM27E3Q08E93 113 aa14.08□□□□□ -0.16
GPC1-207ENST00000466624 TRIP10Q15642 601 aa14.08□□□□□ -0.16
GPC1-207ENST00000466624 C10orf128Q5T292 105 aa14.08□□□□□ -0.16
GPC1-207ENST00000466624 C1QTNF12Q5T7M4 302 aa14.08□□□□□ -0.16
GPC1-207ENST00000466624 OR7E24Q6IFN5 339 aa14.08□□□□□ -0.16
GPC1-207ENST00000466624 ZNF627Q7L945 461 aa14.08□□□□□ -0.16
GPC1-207ENST00000466624 PACRGLQ8N7B6 248 aa14.08□□□□□ -0.16
GPC1-207ENST00000466624 ACBD4Q8NC06 268 aa14.08□□□□□ -0.16
GPC1-207ENST00000466624 STEAP2Q8NFT2 490 aa14.08□□□□□ -0.16
GPC1-207ENST00000466624 OR4Q3Q8NH05 313 aa14.08□□□□□ -0.16
GPC1-207ENST00000466624 KISS1RQ969F8 398 aaPredicted RBP14.08□□□□□ -0.16
GPC1-207ENST00000466624 CRLF2Q9HC73 371 aa14.08□□□□□ -0.16
GPC1-207ENST00000466624 KLHL21Q9UJP4 597 aa14.08□□□□□ -0.16
GPC1-207ENST00000466624 RRP15Q9Y3B9 282 aaKnown RBP14.08□□□□□ -0.16
GPC1-207ENST00000466624 ORC6Q9Y5N6 252 aa14.08□□□□□ -0.16
GPC1-207ENST00000466624 SLC22A23A1A5C7 686 aa14.07□□□□□ -0.16
GPC1-207ENST00000466624 ZNF99A8MXY4 864 aaPredicted RBP14.07□□□□□ -0.16
GPC1-207ENST00000466624 DHHO43323 396 aa14.07□□□□□ -0.16
GPC1-207ENST00000466624 QDPRP09417 244 aa14.07□□□□□ -0.16
GPC1-207ENST00000466624 PPP3CBP16298 524 aa14.07□□□□□ -0.16
GPC1-207ENST00000466624 HIST1H1CP16403 213 aaKnown RBP14.07□□□□□ -0.16
GPC1-207ENST00000466624 IGFBP2P18065 325 aa14.07□□□□□ -0.16
GPC1-207ENST00000466624 POU1F1P28069 291 aa14.07□□□□□ -0.16
GPC1-207ENST00000466624 CCKARP32238 428 aa14.07□□□□□ -0.16
GPC1-207ENST00000466624 MYBPC1Q00872 1141 aa14.07□□□□□ -0.16
GPC1-207ENST00000466624 CD47Q08722 323 aa14.07□□□□□ -0.16
GPC1-207ENST00000466624 GINS1Q14691 196 aa14.07□□□□□ -0.16
GPC1-207ENST00000466624 CEACAM16Q2WEN9 425 aa14.07□□□□□ -0.16
GPC1-207ENST00000466624 OGFRL1Q5TC84 451 aaPredicted RBP14.07□□□□□ -0.16
GPC1-207ENST00000466624 LRFN4Q6PJG9 635 aa14.07□□□□□ -0.16
GPC1-207ENST00000466624 PTCHD4Q6ZW05 846 aa14.07□□□□□ -0.16
GPC1-207ENST00000466624 BHLHA15Q7RTS1 189 aaPredicted RBP14.07□□□□□ -0.16
GPC1-207ENST00000466624 JAZF1Q86VZ6 243 aa14.07□□□□□ -0.16
GPC1-207ENST00000466624 C17orf78Q8N4C9 275 aa14.07□□□□□ -0.16
GPC1-207ENST00000466624 SYT14Q8NB59 555 aa14.07□□□□□ -0.16
GPC1-207ENST00000466624 MCHR2Q969V1 340 aa14.07□□□□□ -0.16
GPC1-207ENST00000466624 RDH12Q96NR8 316 aa14.07□□□□□ -0.16
GPC1-207ENST00000466624 MUS81Q96NY9 551 aa14.07□□□□□ -0.16
GPC1-207ENST00000466624 SLC29A1Q99808 456 aa14.07□□□□□ -0.16
GPC1-207ENST00000466624 TEX12Q9BXU0 123 aa14.07□□□□□ -0.16
GPC1-207ENST00000466624 CMC2Q9NRP2 79 aa14.07□□□□□ -0.16
GPC1-207ENST00000466624 ZAR1LA6NP61 321 aa14.06□□□□□ -0.16
GPC1-207ENST00000466624 PRSS44E7EML9 344 aa14.06□□□□□ -0.16
GPC1-207ENST00000466624 LYZL6O75951 148 aa14.06□□□□□ -0.16
GPC1-207ENST00000466624 CLDN1O95832 211 aa14.06□□□□□ -0.16
GPC1-207ENST00000466624 IFNGP01579 166 aa14.06□□□□□ -0.16
GPC1-207ENST00000466624 HMGN1P05114 100 aa14.06□□□□□ -0.16
GPC1-207ENST00000466624 IL32P24001 234 aa14.06□□□□□ -0.16
GPC1-207ENST00000466624 GRNP28799 593 aaKnown RBP14.06□□□□□ -0.16
GPC1-207ENST00000466624 CDKN2AP42771 156 aaKnown RBP14.06□□□□□ -0.16
GPC1-207ENST00000466624 FOXG1P55316 489 aaPredicted RBP14.06□□□□□ -0.16
GPC1-207ENST00000466624 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.06□□□□□ -0.16
GPC1-207ENST00000466624 NPRL3Q12980 569 aa14.06□□□□□ -0.16
GPC1-207ENST00000466624 PTGES3Q15185 160 aaKnown RBP14.06□□□□□ -0.16
GPC1-207ENST00000466624 GABRA6Q16445 453 aa14.06□□□□□ -0.16
GPC1-207ENST00000466624 NRN1LQ496H8 165 aa14.06□□□□□ -0.16
GPC1-207ENST00000466624 ZNF362Q5T0B9 420 aaPredicted RBP14.06□□□□□ -0.16
GPC1-207ENST00000466624 SLC25A47Q6Q0C1 308 aa14.06□□□□□ -0.16
GPC1-207ENST00000466624 SSX8Q7RTT4 187 aa14.06□□□□□ -0.16
GPC1-207ENST00000466624 P2RY8Q86VZ1 359 aa14.06□□□□□ -0.16
GPC1-207ENST00000466624 OR1K1Q8NGR3 316 aa14.06□□□□□ -0.16
GPC1-207ENST00000466624 OR4K13Q8NH42 304 aa14.06□□□□□ -0.16
GPC1-207ENST00000466624 PSMG3-AS1Q96PY0 264 aa14.06□□□□□ -0.16
GPC1-207ENST00000466624 DDOQ99489 341 aa14.06□□□□□ -0.16
GPC1-207ENST00000466624 PRRG3Q9BZD7 231 aa14.06□□□□□ -0.16
GPC1-207ENST00000466624 SLC24A3Q9HC58 644 aa14.06□□□□□ -0.16
GPC1-207ENST00000466624 NKX1-2Q9UD57 310 aaPredicted RBP14.06□□□□□ -0.16
GPC1-207ENST00000466624 DOPEY2Q9Y3R5 2298 aa14.06□□□□□ -0.16
GPC1-207ENST00000466624 SPTAN1Q13813 2472 aaKnown RBP14.05□□□□□ -0.16
GPC1-207ENST00000466624 ICE1Q9Y2F5 2266 aa14.05□□□□□ -0.16
GPC1-207ENST00000466624 CIB4A0PJX0 185 aa14.05□□□□□ -0.16
GPC1-207ENST00000466624 C19orf84I3L1E1 186 aa14.05□□□□□ -0.16
GPC1-207ENST00000466624 RENP00797 406 aa14.05□□□□□ -0.16
GPC1-207ENST00000466624 HOXB1P14653 301 aaPredicted RBP14.05□□□□□ -0.16
GPC1-207ENST00000466624 PEX2P28328 305 aa14.05□□□□□ -0.16
GPC1-207ENST00000466624 CRABP1P29762 137 aa14.05□□□□□ -0.16
GPC1-207ENST00000466624 ZNF84P51523 738 aa14.05□□□□□ -0.16
GPC1-207ENST00000466624 FMODQ06828 376 aa14.05□□□□□ -0.16
GPC1-207ENST00000466624 SLC35F1Q5T1Q4 408 aa14.05□□□□□ -0.16
GPC1-207ENST00000466624 SLX4IPQ5VYV7 408 aa14.05□□□□□ -0.16
GPC1-207ENST00000466624 LPCAT4Q643R3 524 aa14.05□□□□□ -0.16
GPC1-207ENST00000466624 ACSM5Q6NUN0 579 aa14.05□□□□□ -0.16
GPC1-207ENST00000466624 LEG1Q6P5S2 330 aa14.05□□□□□ -0.16
GPC1-207ENST00000466624 ANKRD16Q6P6B7 361 aa14.05□□□□□ -0.16
GPC1-207ENST00000466624 DNM1P34Q6PK57 102 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms