RNA–Protein interactions for RNA: ENST00000465627.5

UBA3-208, Transcript of ubiquitin like modifier activating enzyme 3, human

TSL 2

Gene UBA3, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBA3-208	ENST00000465627	HIST1H2AC	Q93077	130 aa		7.85	□□□□□ -1.15
UBA3-208	ENST00000465627	MUL1	Q969V5	352 aa		7.85	□□□□□ -1.15
UBA3-208	ENST00000465627	RELT	Q969Z4	430 aa		7.85	□□□□□ -1.15
UBA3-208	ENST00000465627	SFXN2	Q96NB2	322 aa		7.85	□□□□□ -1.15
UBA3-208	ENST00000465627	TEAD3	Q99594	435 aa		7.85	□□□□□ -1.15
UBA3-208	ENST00000465627	COPS4	Q9BT78	406 aa		7.85	□□□□□ -1.15
UBA3-208	ENST00000465627	TEX12	Q9BXU0	123 aa		7.85	□□□□□ -1.15
UBA3-208	ENST00000465627	MRPL13	Q9BYD1	178 aa	Known RBP	7.85	□□□□□ -1.15
UBA3-208	ENST00000465627	CSTF2T	Q9H0L4	616 aa	Known RBP eCLIP	7.85	□□□□□ -1.15
UBA3-208	ENST00000465627	SLC6A15	Q9H2J7	730 aa		7.85	□□□□□ -1.15
UBA3-208	ENST00000465627	ACOT13	Q9NPJ3	140 aa		7.85	□□□□□ -1.15
UBA3-208	ENST00000465627	B4GALT7	Q9UBV7	327 aa		7.85	□□□□□ -1.15
UBA3-208	ENST00000465627	WARS2	Q9UGM6	360 aa	Known RBP	7.85	□□□□□ -1.15
UBA3-208	ENST00000465627	ING1	Q9UK53	422 aa	Predicted RBP	7.85	□□□□□ -1.15
UBA3-208	ENST00000465627	AKAP8L	Q9ULX6	646 aa	Known RBP eCLIP	7.85	□□□□□ -1.15
UBA3-208	ENST00000465627	DIMT1	Q9UNQ2	313 aa	Known RBP	7.85	□□□□□ -1.15
UBA3-208	ENST00000465627	LSM2	Q9Y333	95 aa	Known RBP	7.85	□□□□□ -1.15
UBA3-208	ENST00000465627	RPL36	Q9Y3U8	105 aa	Known RBP	7.85	□□□□□ -1.15
UBA3-208	ENST00000465627	LIPG	Q9Y5X9	500 aa		7.85	□□□□□ -1.15
UBA3-208	ENST00000465627	JMJD1C	Q15652	2540 aa		7.85	□□□□□ -1.15
UBA3-208	ENST00000465627	IGLV1-36	A0A0B4J1U3	117 aa		7.84	□□□□□ -1.15
UBA3-208	ENST00000465627		A0A1B0GVC2	190 aa		7.84	□□□□□ -1.15
UBA3-208	ENST00000465627	PRSS37	A4D1T9	235 aa		7.84	□□□□□ -1.15
UBA3-208	ENST00000465627	ZNF716	A6NP11	495 aa		7.84	□□□□□ -1.15
UBA3-208	ENST00000465627	FAM166B	A8MTA8	275 aa		7.84	□□□□□ -1.15
UBA3-208	ENST00000465627	PRR23D1	E9PI22	279 aa	Predicted RBP	7.84	□□□□□ -1.15
UBA3-208	ENST00000465627	C11orf98	E9PRG8	122 aa		7.84	□□□□□ -1.15
UBA3-208	ENST00000465627	SULT2B1	O00204	365 aa		7.84	□□□□□ -1.15
UBA3-208	ENST00000465627	TNFSF11	O14788	317 aa		7.84	□□□□□ -1.15
UBA3-208	ENST00000465627	SEC14L5	O43304	696 aa		7.84	□□□□□ -1.15
UBA3-208	ENST00000465627	EIF1B	O60739	113 aa	Known RBP	7.84	□□□□□ -1.15
UBA3-208	ENST00000465627	TRAPPC6A	O75865	159 aa		7.84	□□□□□ -1.15
UBA3-208	ENST00000465627	SEC14L2	O76054	403 aa		7.84	□□□□□ -1.15
UBA3-208	ENST00000465627	IFNG	P01579	166 aa		7.84	□□□□□ -1.15
UBA3-208	ENST00000465627	PRR23D2	P0DMB1	279 aa	Predicted RBP	7.84	□□□□□ -1.15
UBA3-208	ENST00000465627	SPI1	P17947	270 aa		7.84	□□□□□ -1.15
UBA3-208	ENST00000465627	GSTT1	P30711	240 aa		7.84	□□□□□ -1.15
UBA3-208	ENST00000465627	MTNR1A	P48039	350 aa		7.84	□□□□□ -1.15
UBA3-208	ENST00000465627	STAR	P49675	285 aa		7.84	□□□□□ -1.15
UBA3-208	ENST00000465627	GP2	P55259	537 aa	Known RBP	7.84	□□□□□ -1.15
UBA3-208	ENST00000465627	CDH11	P55287	796 aa		7.84	□□□□□ -1.15
UBA3-208	ENST00000465627	OR2B6	P58173	313 aa		7.84	□□□□□ -1.15
UBA3-208	ENST00000465627	HSF1	Q00613	529 aa		7.84	□□□□□ -1.15
UBA3-208	ENST00000465627	RAB40B	Q12829	278 aa		7.84	□□□□□ -1.15
UBA3-208	ENST00000465627	SLC17A1	Q14916	467 aa		7.84	□□□□□ -1.15
UBA3-208	ENST00000465627	HIST3H3	Q16695	136 aa		7.84	□□□□□ -1.15
UBA3-208	ENST00000465627	SYT6	Q5T7P8	510 aa	Predicted RBP	7.84	□□□□□ -1.15
UBA3-208	ENST00000465627	EEF1A1P5	Q5VTE0	462 aa		7.84	□□□□□ -1.15
UBA3-208	ENST00000465627	VASN	Q6EMK4	673 aa		7.84	□□□□□ -1.15
UBA3-208	ENST00000465627	ABLIM2	Q6H8Q1	611 aa		7.84	□□□□□ -1.15
UBA3-208	ENST00000465627	RPUSD3	Q6P087	351 aa	Known RBP	7.84	□□□□□ -1.15
UBA3-208	ENST00000465627	BORA	Q6PGQ7	559 aa		7.84	□□□□□ -1.15
UBA3-208	ENST00000465627	ADCK1	Q86TW2	530 aa		7.84	□□□□□ -1.15
UBA3-208	ENST00000465627	SLC22A16	Q86VW1	577 aa		7.84	□□□□□ -1.15
UBA3-208	ENST00000465627	OR6V1	Q8N148	313 aa		7.84	□□□□□ -1.15
UBA3-208	ENST00000465627	ZIC4	Q8N9L1	334 aa		7.84	□□□□□ -1.15
UBA3-208	ENST00000465627	OR2V1	Q8NHB1	315 aa		7.84	□□□□□ -1.15
UBA3-208	ENST00000465627	NEIL3	Q8TAT5	605 aa		7.84	□□□□□ -1.15
UBA3-208	ENST00000465627	RFK	Q969G6	155 aa		7.84	□□□□□ -1.15
UBA3-208	ENST00000465627	TMIGD2	Q96BF3	282 aa		7.84	□□□□□ -1.15
UBA3-208	ENST00000465627	DTNBP1	Q96EV8	351 aa		7.84	□□□□□ -1.15
UBA3-208	ENST00000465627	TXNDC15	Q96J42	360 aa		7.84	□□□□□ -1.15
UBA3-208	ENST00000465627	OXGR1	Q96P68	337 aa		7.84	□□□□□ -1.15
UBA3-208	ENST00000465627	TAAR6	Q96RI8	345 aa		7.84	□□□□□ -1.15
UBA3-208	ENST00000465627	UCN2	Q96RP3	112 aa		7.84	□□□□□ -1.15
UBA3-208	ENST00000465627	SLC25A18	Q9H1K4	315 aa		7.84	□□□□□ -1.15
UBA3-208	ENST00000465627	MARCH7	Q9H992	704 aa		7.84	□□□□□ -1.15
UBA3-208	ENST00000465627	ADGRL4	Q9HBW9	690 aa		7.84	□□□□□ -1.15
UBA3-208	ENST00000465627	ASB6	Q9NWX5	421 aa		7.84	□□□□□ -1.15
UBA3-208	ENST00000465627	TAS2R16	Q9NYV7	291 aa		7.84	□□□□□ -1.15
UBA3-208	ENST00000465627	SPRR3	Q9UBC9	169 aa		7.84	□□□□□ -1.15
UBA3-208	ENST00000465627	RASD1	Q9Y272	281 aa		7.84	□□□□□ -1.15
UBA3-208	ENST00000465627	NOX1	Q9Y5S8	564 aa		7.84	□□□□□ -1.15
UBA3-208	ENST00000465627	DNAJC13	O75165	2243 aa		7.84	□□□□□ -1.15
UBA3-208	ENST00000465627	SLC22A23	A1A5C7	686 aa		7.84	□□□□□ -1.16
UBA3-208	ENST00000465627	SLC22A31	A6NKX4	558 aa		7.84	□□□□□ -1.16
UBA3-208	ENST00000465627	GJE1	A6NN92	205 aa		7.84	□□□□□ -1.16
UBA3-208	ENST00000465627	RNF13	O43567	381 aa		7.84	□□□□□ -1.16
UBA3-208	ENST00000465627	AHCYL1	O43865	530 aa		7.84	□□□□□ -1.16
UBA3-208	ENST00000465627	ZNF432	O94892	652 aa		7.84	□□□□□ -1.16
UBA3-208	ENST00000465627	ACTL6A	O96019	429 aa		7.84	□□□□□ -1.16
UBA3-208	ENST00000465627	PLG	P00747	810 aa	Predicted RBP	7.84	□□□□□ -1.16
UBA3-208	ENST00000465627	PTH	P01270	115 aa		7.84	□□□□□ -1.16
UBA3-208	ENST00000465627	GYPB	P06028	91 aa		7.84	□□□□□ -1.16
UBA3-208	ENST00000465627	SBK2	P0C263	348 aa		7.84	□□□□□ -1.16
UBA3-208	ENST00000465627	LIMS3	P0CW19	117 aa		7.84	□□□□□ -1.16
UBA3-208	ENST00000465627	LIMS4	P0CW20	117 aa		7.84	□□□□□ -1.16
UBA3-208	ENST00000465627	CPN1	P15169	458 aa		7.84	□□□□□ -1.16
UBA3-208	ENST00000465627	IFNGR1	P15260	489 aa		7.84	□□□□□ -1.16
UBA3-208	ENST00000465627	ENPP1	P22413	925 aa		7.84	□□□□□ -1.16
UBA3-208	ENST00000465627	EEF1B2	P24534	225 aa	Known RBP	7.84	□□□□□ -1.16
UBA3-208	ENST00000465627	NTF4	P34130	210 aa		7.84	□□□□□ -1.16
UBA3-208	ENST00000465627	PTGS2	P35354	604 aa		7.84	□□□□□ -1.16
UBA3-208	ENST00000465627	MAP2K4	P45985	399 aa		7.84	□□□□□ -1.16
UBA3-208	ENST00000465627	ZNF133	P52736	654 aa	Predicted RBP	7.84	□□□□□ -1.16
UBA3-208	ENST00000465627	SLC16A1	P53985	500 aa		7.84	□□□□□ -1.16
UBA3-208	ENST00000465627	CSNK2A1	P68400	391 aa	Predicted RBP	7.84	□□□□□ -1.16
UBA3-208	ENST00000465627	ZNF169	Q14929	603 aa	Predicted RBP	7.84	□□□□□ -1.16
UBA3-208	ENST00000465627	SLC10A1	Q14973	349 aa		7.84	□□□□□ -1.16
UBA3-208	ENST00000465627	SLC35D3	Q5M8T2	416 aa		7.84	□□□□□ -1.16

Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms