RNA–Protein interactions for RNA: ENST00000465563.5

SMC4-205, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-205ENST00000465563 KCTD21Q4G0X4 260 aa2.28□□□□□ -2.04
SMC4-205ENST00000465563 PRAMEF5Q5TYX0 476 aa2.28□□□□□ -2.04
SMC4-205ENST00000465563 PRAMEF6Q5VXH4 476 aa2.28□□□□□ -2.04
SMC4-205ENST00000465563 ZYG11AQ6WRX3 759 aa2.28□□□□□ -2.04
SMC4-205ENST00000465563 Q6ZSR3 168 aa2.28□□□□□ -2.04
SMC4-205ENST00000465563 CALHM3Q86XJ0 350 aa2.28□□□□□ -2.04
SMC4-205ENST00000465563 PLA2G4DQ86XP0 818 aa2.28□□□□□ -2.04
SMC4-205ENST00000465563 ZADH2Q8N4Q0 377 aa2.28□□□□□ -2.04
SMC4-205ENST00000465563 ZNF557Q8N988 423 aaPredicted RBP2.28□□□□□ -2.04
SMC4-205ENST00000465563 OR9K2Q8NGE7 335 aa2.28□□□□□ -2.04
SMC4-205ENST00000465563 FANK1Q8TC84 345 aa2.28□□□□□ -2.04
SMC4-205ENST00000465563 RMI2Q96E14 147 aa2.28□□□□□ -2.04
SMC4-205ENST00000465563 SORT1Q99523 831 aa2.28□□□□□ -2.04
SMC4-205ENST00000465563 ROGDIQ9GZN7 287 aa2.28□□□□□ -2.04
SMC4-205ENST00000465563 MFFQ9GZY8 342 aa2.28□□□□□ -2.04
SMC4-205ENST00000465563 SIAEQ9HAT2 523 aa2.28□□□□□ -2.04
SMC4-205ENST00000465563 UGT1A7Q9HAW7 530 aa2.28□□□□□ -2.04
SMC4-205ENST00000465563 UGT1A10Q9HAW8 530 aa2.28□□□□□ -2.04
SMC4-205ENST00000465563 UGT1A8Q9HAW9 530 aa2.28□□□□□ -2.04
SMC4-205ENST00000465563 ADAP2Q9NPF8 381 aa2.28□□□□□ -2.04
SMC4-205ENST00000465563 GLRX2Q9NS18 164 aa2.28□□□□□ -2.04
SMC4-205ENST00000465563 SPATA7Q9P0W8 599 aa2.28□□□□□ -2.04
SMC4-205ENST00000465563 TRAPPC4Q9Y296 219 aa2.28□□□□□ -2.04
SMC4-205ENST00000465563 NUP214P35658 2090 aaPredicted RBP2.28□□□□□ -2.04
SMC4-205ENST00000465563 DOCK9Q9BZ29 2069 aa2.28□□□□□ -2.04
SMC4-205ENST00000465563 PCM1Q15154 2024 aa2.28□□□□□ -2.04
SMC4-205ENST00000465563 H0Y8G0 127 aa2.27□□□□□ -2.05
SMC4-205ENST00000465563 TOM1O60784 492 aa2.27□□□□□ -2.05
SMC4-205ENST00000465563 IGLV2-23P01705 113 aa2.27□□□□□ -2.05
SMC4-205ENST00000465563 IGHV3-43DP0DP04 118 aa2.27□□□□□ -2.05
SMC4-205ENST00000465563 ZNF43P17038 809 aa2.27□□□□□ -2.05
SMC4-205ENST00000465563 RDXP35241 583 aaKnown RBP2.27□□□□□ -2.05
SMC4-205ENST00000465563 SSR1P43307 286 aaKnown RBP2.27□□□□□ -2.05
SMC4-205ENST00000465563 GPR6P46095 362 aaPredicted RBP2.27□□□□□ -2.05
SMC4-205ENST00000465563 SULT1E1P49888 294 aa2.27□□□□□ -2.05
SMC4-205ENST00000465563 REG3AQ06141 175 aa2.27□□□□□ -2.05
SMC4-205ENST00000465563 LRRC74AQ0VAA2 488 aa2.27□□□□□ -2.05
SMC4-205ENST00000465563 FZD2Q14332 565 aa2.27□□□□□ -2.05
SMC4-205ENST00000465563 SGCAQ16586 387 aa2.27□□□□□ -2.05
SMC4-205ENST00000465563 LRRC10Q5BKY1 277 aa2.27□□□□□ -2.05
SMC4-205ENST00000465563 PRR9Q5T870 116 aa2.27□□□□□ -2.05
SMC4-205ENST00000465563 FRMPD2BQ6IN97 320 aa2.27□□□□□ -2.05
SMC4-205ENST00000465563 ZNF621Q6ZSS3 439 aa2.27□□□□□ -2.05
SMC4-205ENST00000465563 NBPF5PQ86XG9 351 aaPredicted RBP2.27□□□□□ -2.05
SMC4-205ENST00000465563 SLC22A9Q8IVM8 553 aa2.27□□□□□ -2.05
SMC4-205ENST00000465563 OR4F15Q8NGB8 312 aa2.27□□□□□ -2.05
SMC4-205ENST00000465563 ACER1Q8TDN7 264 aa2.27□□□□□ -2.05
SMC4-205ENST00000465563 SH3GL1Q99961 368 aa2.27□□□□□ -2.05
SMC4-205ENST00000465563 DMAP1Q9NPF5 467 aaPredicted RBP2.27□□□□□ -2.05
SMC4-205ENST00000465563 CSDC2Q9Y534 153 aaKnown RBP2.27□□□□□ -2.05
SMC4-205ENST00000465563 IKBKGQ9Y6K9 419 aa2.27□□□□□ -2.05
SMC4-205ENST00000465563 ZNF726A6NNF4 738 aa2.26□□□□□ -2.05
SMC4-205ENST00000465563 ZNF716A6NP11 495 aa2.26□□□□□ -2.05
SMC4-205ENST00000465563 UBXN8O00124 270 aa2.26□□□□□ -2.05
SMC4-205ENST00000465563 MPHOSPH10O00566 681 aaKnown RBP2.26□□□□□ -2.05
SMC4-205ENST00000465563 CCL21O00585 134 aa2.26□□□□□ -2.05
SMC4-205ENST00000465563 PEX7O00628 323 aa2.26□□□□□ -2.05
SMC4-205ENST00000465563 GIPP09681 153 aaPredicted RBP2.26□□□□□ -2.05
SMC4-205ENST00000465563 RHOXF2BP0C7M4 288 aa2.26□□□□□ -2.05
SMC4-205ENST00000465563 UQCRFS1P1P0C7P4 283 aa2.26□□□□□ -2.05
SMC4-205ENST00000465563 ZNF735P0CB33 412 aa2.26□□□□□ -2.05
SMC4-205ENST00000465563 NCF2P19878 526 aaPredicted RBP2.26□□□□□ -2.05
SMC4-205ENST00000465563 TCN1P20061 433 aaPredicted RBP2.26□□□□□ -2.05
SMC4-205ENST00000465563 RSPO1Q2MKA7 263 aaPredicted RBP2.26□□□□□ -2.05
SMC4-205ENST00000465563 LY6G6FQ5SQ64 297 aa2.26□□□□□ -2.05
SMC4-205ENST00000465563 LYPD2Q6UXB3 125 aa2.26□□□□□ -2.05
SMC4-205ENST00000465563 UTS2BQ765I0 119 aa2.26□□□□□ -2.05
SMC4-205ENST00000465563 LHFPL3Q86UP9 236 aa2.26□□□□□ -2.05
SMC4-205ENST00000465563 THOC6Q86W42 341 aaKnown RBP2.26□□□□□ -2.05
SMC4-205ENST00000465563 CDH26Q8IXH8 852 aa2.26□□□□□ -2.05
SMC4-205ENST00000465563 C12orf56Q8IXR9 622 aa2.26□□□□□ -2.05
SMC4-205ENST00000465563 PUSL1Q8N0Z8 303 aaKnown RBP2.26□□□□□ -2.05
SMC4-205ENST00000465563 UBE2J2Q8N2K1 259 aa2.26□□□□□ -2.05
SMC4-205ENST00000465563 OR2G3Q8NGZ4 309 aa2.26□□□□□ -2.05
SMC4-205ENST00000465563 PLPPR1Q8TBJ4 325 aa2.26□□□□□ -2.05
SMC4-205ENST00000465563 SLC2A14Q8TDB8 520 aa2.26□□□□□ -2.05
SMC4-205ENST00000465563 DNTTIP1Q9H147 329 aa2.26□□□□□ -2.05
SMC4-205ENST00000465563 NEUROG2Q9H2A3 272 aa2.26□□□□□ -2.05
SMC4-205ENST00000465563 IFI27L2Q9H2X8 130 aa2.26□□□□□ -2.05
SMC4-205ENST00000465563 EXD2Q9NVH0 621 aa2.26□□□□□ -2.05
SMC4-205ENST00000465563 SLC25A37Q9NYZ2 338 aa2.26□□□□□ -2.05
SMC4-205ENST00000465563 N6AMT1Q9Y5N5 214 aa2.26□□□□□ -2.05
SMC4-205ENST00000465563 F11RQ9Y624 299 aaKnown RBP2.26□□□□□ -2.05
SMC4-205ENST00000465563 WDR62O43379 1518 aa2.26□□□□□ -2.05
SMC4-205ENST00000465563 A0A1B0GVI7 797 aa2.25□□□□□ -2.05
SMC4-205ENST00000465563 C2P06681 752 aa2.25□□□□□ -2.05
SMC4-205ENST00000465563 GKN3PP0CG01 181 aa2.25□□□□□ -2.05
SMC4-205ENST00000465563 ABOP16442 354 aa2.25□□□□□ -2.05
SMC4-205ENST00000465563 HNRNPH3P31942 346 aaKnown RBP2.25□□□□□ -2.05
SMC4-205ENST00000465563 CASP14P31944 242 aa2.25□□□□□ -2.05
SMC4-205ENST00000465563 RORAP35398 523 aa2.25□□□□□ -2.05
SMC4-205ENST00000465563 HSD17B2P37059 387 aa2.25□□□□□ -2.05
SMC4-205ENST00000465563 KCNJ2P63252 427 aa2.25□□□□□ -2.05
SMC4-205ENST00000465563 IDI1Q13907 227 aa2.25□□□□□ -2.05
SMC4-205ENST00000465563 GUCA2BQ16661 112 aa2.25□□□□□ -2.05
SMC4-205ENST00000465563 FAM228AQ86W67 206 aa2.25□□□□□ -2.05
SMC4-205ENST00000465563 MS4A15Q8N5U1 240 aa2.25□□□□□ -2.05
SMC4-205ENST00000465563 NECAB1Q8N987 351 aa2.25□□□□□ -2.05
SMC4-205ENST00000465563 OR1N2Q8NGR9 330 aa2.25□□□□□ -2.05
SMC4-205ENST00000465563 AKR7LQ8NHP1 331 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms