RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 NAMPTP43490 491 aa3.59□□□□□ -1.83
PTCD3-205ENST00000464541 TPMTP51580 245 aa3.59□□□□□ -1.83
PTCD3-205ENST00000464541 PFN3P60673 137 aa3.59□□□□□ -1.83
PTCD3-205ENST00000464541 KLRC3Q07444 240 aa3.59□□□□□ -1.83
PTCD3-205ENST00000464541 TSPO2Q5TGU0 170 aa3.59□□□□□ -1.83
PTCD3-205ENST00000464541 ZNF691Q5VV52 312 aa3.59□□□□□ -1.83
PTCD3-205ENST00000464541 TIGD3Q6B0B8 471 aa3.59□□□□□ -1.83
PTCD3-205ENST00000464541 TMEM53Q6P2H8 277 aa3.59□□□□□ -1.83
PTCD3-205ENST00000464541 DEGS2Q6QHC5 323 aa3.59□□□□□ -1.83
PTCD3-205ENST00000464541 TRMT10CQ7L0Y3 403 aaKnown RBP3.59□□□□□ -1.83
PTCD3-205ENST00000464541 ERO1BQ86YB8 467 aa3.59□□□□□ -1.83
PTCD3-205ENST00000464541 CCDC50Q8IVM0 306 aa3.59□□□□□ -1.83
PTCD3-205ENST00000464541 CD302Q8IX05 232 aa3.59□□□□□ -1.83
PTCD3-205ENST00000464541 FAM58AQ8N1B3 248 aa3.59□□□□□ -1.83
PTCD3-205ENST00000464541 FAM83FQ8NEG4 500 aaPredicted RBP3.59□□□□□ -1.83
PTCD3-205ENST00000464541 LKAAEAR1Q8TD35 194 aa3.59□□□□□ -1.83
PTCD3-205ENST00000464541 CCDC12Q8WUD4 166 aaPredicted RBP3.59□□□□□ -1.83
PTCD3-205ENST00000464541 TGS1Q96RS0 853 aaKnown RBP3.59□□□□□ -1.83
PTCD3-205ENST00000464541 COPS8Q99627 209 aa3.59□□□□□ -1.83
PTCD3-205ENST00000464541 C20orf24Q9BUV8 137 aa3.59□□□□□ -1.83
PTCD3-205ENST00000464541 POPDC2Q9HBU9 364 aa3.59□□□□□ -1.83
PTCD3-205ENST00000464541 IL26Q9NPH9 171 aa3.59□□□□□ -1.83
PTCD3-205ENST00000464541 SMOXQ9NWM0 555 aa3.59□□□□□ -1.83
PTCD3-205ENST00000464541 IL36GQ9NZH8 169 aa3.59□□□□□ -1.83
PTCD3-205ENST00000464541 STX18Q9P2W9 335 aaKnown RBP3.59□□□□□ -1.83
PTCD3-205ENST00000464541 ZNF223Q9UK11 482 aaPredicted RBP3.59□□□□□ -1.83
PTCD3-205ENST00000464541 IKZF2Q9UKS7 526 aa3.59□□□□□ -1.83
PTCD3-205ENST00000464541 OBSCNQ5VST9 7968 aa3.59□□□□□ -1.84
PTCD3-205ENST00000464541 IGLV4-69A0A075B6H9 119 aa3.58□□□□□ -1.84
PTCD3-205ENST00000464541 OR2AG2A6NM03 316 aa3.58□□□□□ -1.84
PTCD3-205ENST00000464541 C12orf71A8MTZ7 269 aa3.58□□□□□ -1.84
PTCD3-205ENST00000464541 FOXE1O00358 373 aaPredicted RBP3.58□□□□□ -1.84
PTCD3-205ENST00000464541 UGT1A9O60656 530 aa3.58□□□□□ -1.84
PTCD3-205ENST00000464541 H6PDO95479 791 aa3.58□□□□□ -1.84
PTCD3-205ENST00000464541 SNAI1O95863 264 aaPredicted RBP3.58□□□□□ -1.84
PTCD3-205ENST00000464541 CRYGBP07316 175 aa3.58□□□□□ -1.84
PTCD3-205ENST00000464541 PNMA6AP0CW24 399 aaPredicted RBP3.58□□□□□ -1.84
PTCD3-205ENST00000464541 PRPS2P11908 318 aa3.58□□□□□ -1.84
PTCD3-205ENST00000464541 HPGDP15428 266 aa3.58□□□□□ -1.84
PTCD3-205ENST00000464541 PCMT1P22061 227 aa3.58□□□□□ -1.84
PTCD3-205ENST00000464541 CMA1P23946 247 aa3.58□□□□□ -1.84
PTCD3-205ENST00000464541 MMP11P24347 488 aa3.58□□□□□ -1.84
PTCD3-205ENST00000464541 CXCR2P25025 360 aa3.58□□□□□ -1.84
PTCD3-205ENST00000464541 LAP3P28838 519 aa3.58□□□□□ -1.84
PTCD3-205ENST00000464541 CASP14P31944 242 aa3.58□□□□□ -1.84
PTCD3-205ENST00000464541 CSNK1EP49674 416 aaKnown RBP3.58□□□□□ -1.84
PTCD3-205ENST00000464541 CDH6P55285 790 aa3.58□□□□□ -1.84
PTCD3-205ENST00000464541 DAOAP59103 153 aa3.58□□□□□ -1.84
PTCD3-205ENST00000464541 RPS14P62263 151 aaKnown RBP3.58□□□□□ -1.84
PTCD3-205ENST00000464541 RAB11AP62491 216 aa3.58□□□□□ -1.84
PTCD3-205ENST00000464541 ENPEPQ07075 957 aa3.58□□□□□ -1.84
PTCD3-205ENST00000464541 BST2Q10589 180 aaKnown RBP3.58□□□□□ -1.84
PTCD3-205ENST00000464541 RAB11BQ15907 218 aa3.58□□□□□ -1.84
PTCD3-205ENST00000464541 MLIPQ5VWP3 458 aa3.58□□□□□ -1.84
PTCD3-205ENST00000464541 KRTAP5-5Q701N2 237 aaPredicted RBP3.58□□□□□ -1.84
PTCD3-205ENST00000464541 RALGPS2Q86X27 583 aaPredicted RBP3.58□□□□□ -1.84
PTCD3-205ENST00000464541 SAXO1Q8IYX7 474 aa3.58□□□□□ -1.84
PTCD3-205ENST00000464541 TMEM123Q8N131 208 aa3.58□□□□□ -1.84
PTCD3-205ENST00000464541 NPBQ8NG41 125 aa3.58□□□□□ -1.84
PTCD3-205ENST00000464541 OR1F12Q8NHA8 337 aa3.58□□□□□ -1.84
PTCD3-205ENST00000464541 CD300LFQ8TDQ1 290 aa3.58□□□□□ -1.84
PTCD3-205ENST00000464541 RAB34Q9BZG1 259 aa3.58□□□□□ -1.84
PTCD3-205ENST00000464541 ROGDIQ9GZN7 287 aa3.58□□□□□ -1.84
PTCD3-205ENST00000464541 ILKAPQ9H0C8 392 aaPredicted RBP3.58□□□□□ -1.84
PTCD3-205ENST00000464541 VCXQ9H320 206 aa3.58□□□□□ -1.84
PTCD3-205ENST00000464541 IL20Q9NYY1 176 aa3.58□□□□□ -1.84
PTCD3-205ENST00000464541 PSMC3IPQ9P2W1 217 aaPredicted RBP3.58□□□□□ -1.84
PTCD3-205ENST00000464541 PISDQ9UG56 409 aa3.58□□□□□ -1.84
PTCD3-205ENST00000464541 ZNF639Q9UID6 485 aa3.58□□□□□ -1.84
PTCD3-205ENST00000464541 TBC1D24Q9ULP9 559 aa3.58□□□□□ -1.84
PTCD3-205ENST00000464541 PLEKHH1Q9ULM0 1364 aa3.58□□□□□ -1.84
PTCD3-205ENST00000464541 A0A0G2JN53 185 aa3.57□□□□□ -1.84
PTCD3-205ENST00000464541 A0A1W2PPV4 95 aa3.57□□□□□ -1.84
PTCD3-205ENST00000464541 GABRR3A8MPY1 467 aa3.57□□□□□ -1.84
PTCD3-205ENST00000464541 SLC25A27O95847 323 aa3.57□□□□□ -1.84
PTCD3-205ENST00000464541 SERPIND1P05546 499 aa3.57□□□□□ -1.84
PTCD3-205ENST00000464541 SRMP19623 302 aa3.57□□□□□ -1.84
PTCD3-205ENST00000464541 HTR2BP41595 481 aa3.57□□□□□ -1.84
PTCD3-205ENST00000464541 ARRB1P49407 418 aaPredicted RBP3.57□□□□□ -1.84
PTCD3-205ENST00000464541 PAX5Q02548 391 aa3.57□□□□□ -1.84
PTCD3-205ENST00000464541 TGFBIQ15582 683 aa3.57□□□□□ -1.84
PTCD3-205ENST00000464541 ATP6AP1Q15904 470 aa3.57□□□□□ -1.84
PTCD3-205ENST00000464541 ZNF829Q3KNS6 432 aaPredicted RBP3.57□□□□□ -1.84
PTCD3-205ENST00000464541 SAMD4BQ5PRF9 694 aaKnown RBP3.57□□□□□ -1.84
PTCD3-205ENST00000464541 TWF2Q6IBS0 349 aaKnown RBP3.57□□□□□ -1.84
PTCD3-205ENST00000464541 OR2A2Q6IF42 318 aa3.57□□□□□ -1.84
PTCD3-205ENST00000464541 H2BFWTQ7Z2G1 175 aa3.57□□□□□ -1.84
PTCD3-205ENST00000464541 ZNF571Q7Z3V5 609 aaPredicted RBP3.57□□□□□ -1.84
PTCD3-205ENST00000464541 C6orf120Q7Z4R8 191 aa3.57□□□□□ -1.84
PTCD3-205ENST00000464541 CAMK2N1Q7Z7J9 78 aa3.57□□□□□ -1.84
PTCD3-205ENST00000464541 GABRG1Q8N1C3 465 aa3.57□□□□□ -1.84
PTCD3-205ENST00000464541 OR2L13Q8N349 312 aa3.57□□□□□ -1.84
PTCD3-205ENST00000464541 ASCC1Q8N9N2 400 aaKnown RBP3.57□□□□□ -1.84
PTCD3-205ENST00000464541 OR4K14Q8NGD5 310 aa3.57□□□□□ -1.84
PTCD3-205ENST00000464541 NDRG1Q92597 394 aaKnown RBP3.57□□□□□ -1.84
PTCD3-205ENST00000464541 RAB1CQ92928 201 aa3.57□□□□□ -1.84
PTCD3-205ENST00000464541 PELI1Q96FA3 418 aa3.57□□□□□ -1.84
PTCD3-205ENST00000464541 FCRL1Q96LA6 429 aa3.57□□□□□ -1.84
PTCD3-205ENST00000464541 PELOQ9BRX2 385 aaKnown RBP3.57□□□□□ -1.84
PTCD3-205ENST00000464541 TRIM62Q9BVG3 475 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms