RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 TUBA1AQ71U36 451 aa14.9□□□□□ -0.02
VPS52-215ENST00000464425 ZNF771Q7L3S4 317 aaPredicted RBP14.9□□□□□ -0.02
VPS52-215ENST00000464425 AMIGO2Q86SJ2 522 aa14.9□□□□□ -0.02
VPS52-215ENST00000464425 HIPK1Q86Z02 1210 aa14.9□□□□□ -0.02
VPS52-215ENST00000464425 AQP11Q8NBQ7 271 aa14.9□□□□□ -0.02
VPS52-215ENST00000464425 KBTBD8Q8NFY9 601 aa14.9□□□□□ -0.02
VPS52-215ENST00000464425 OR10G2Q8NGC3 310 aa14.9□□□□□ -0.02
VPS52-215ENST00000464425 OR9Q2Q8NGE9 314 aa14.9□□□□□ -0.02
VPS52-215ENST00000464425 OR51A7Q8NH64 312 aa14.9□□□□□ -0.02
VPS52-215ENST00000464425 OR6X1Q8NH79 312 aa14.9□□□□□ -0.02
VPS52-215ENST00000464425 OR5K1Q8NHB7 308 aa14.9□□□□□ -0.02
VPS52-215ENST00000464425 LILRB1Q8NHL6 650 aaPredicted RBP14.9□□□□□ -0.02
VPS52-215ENST00000464425 LRR1Q96L50 414 aa14.9□□□□□ -0.02
VPS52-215ENST00000464425 ADAD1Q96M93 576 aaKnown RBP14.9□□□□□ -0.02
VPS52-215ENST00000464425 TNFRSF13CQ96RJ3 184 aa14.9□□□□□ -0.02
VPS52-215ENST00000464425 B3GAT2Q9NPZ5 323 aa14.9□□□□□ -0.02
VPS52-215ENST00000464425 INIPQ9NRY2 104 aa14.9□□□□□ -0.02
VPS52-215ENST00000464425 PDP1Q9P0J1 537 aaPredicted RBP14.9□□□□□ -0.02
VPS52-215ENST00000464425 SIGLEC7Q9Y286 467 aa14.9□□□□□ -0.02
VPS52-215ENST00000464425 OTOGQ6ZRI0 2925 aa14.89□□□□□ -0.03
VPS52-215ENST00000464425 TRAV27A0A087WT01 109 aa14.89□□□□□ -0.03
VPS52-215ENST00000464425 NPIPB13A6NJU9 1138 aa14.89□□□□□ -0.03
VPS52-215ENST00000464425 NPIPB4C9JG80 1138 aa14.89□□□□□ -0.03
VPS52-215ENST00000464425 ABCD4O14678 606 aa14.89□□□□□ -0.03
VPS52-215ENST00000464425 WNT11O96014 354 aa14.89□□□□□ -0.03
VPS52-215ENST00000464425 GSTM3P21266 225 aa14.89□□□□□ -0.03
VPS52-215ENST00000464425 CD40P25942 277 aa14.89□□□□□ -0.03
VPS52-215ENST00000464425 SH3BGRP55822 239 aaPredicted RBP14.89□□□□□ -0.03
VPS52-215ENST00000464425 COX10Q12887 443 aa14.89□□□□□ -0.03
VPS52-215ENST00000464425 TMEM108Q6UXF1 575 aa14.89□□□□□ -0.03
VPS52-215ENST00000464425 PIAS4Q8N2W9 510 aaPredicted RBP14.89□□□□□ -0.03
VPS52-215ENST00000464425 SVOPLQ8N434 492 aa14.89□□□□□ -0.03
VPS52-215ENST00000464425 OR13C2Q8NGS9 318 aa14.89□□□□□ -0.03
VPS52-215ENST00000464425 ZNF566Q969W8 418 aa14.89□□□□□ -0.03
VPS52-215ENST00000464425 FEVQ99581 238 aa14.89□□□□□ -0.03
VPS52-215ENST00000464425 PKP2Q99959 881 aa14.89□□□□□ -0.03
VPS52-215ENST00000464425 ULBP2Q9BZM5 246 aa14.89□□□□□ -0.03
VPS52-215ENST00000464425 NELFAQ9H3P2 528 aa14.89□□□□□ -0.03
VPS52-215ENST00000464425 PRRC2AP48634 2157 aaKnown RBP14.88□□□□□ -0.03
VPS52-215ENST00000464425 ZNF99A8MXY4 864 aaPredicted RBP14.88□□□□□ -0.03
VPS52-215ENST00000464425 MCIDASD6RGH6 385 aa14.88□□□□□ -0.03
VPS52-215ENST00000464425 G3V2T6 193 aa14.88□□□□□ -0.03
VPS52-215ENST00000464425 HS3ST1O14792 307 aa14.88□□□□□ -0.03
VPS52-215ENST00000464425 ANXA8P13928 327 aa14.88□□□□□ -0.03
VPS52-215ENST00000464425 PTAFRP25105 342 aa14.88□□□□□ -0.03
VPS52-215ENST00000464425 ELF3P78545 371 aaPredicted RBP14.88□□□□□ -0.03
VPS52-215ENST00000464425 RUNX1T1Q06455 604 aa14.88□□□□□ -0.03
VPS52-215ENST00000464425 SPOCK1Q08629 439 aa14.88□□□□□ -0.03
VPS52-215ENST00000464425 DEFB113Q30KQ7 82 aa14.88□□□□□ -0.03
VPS52-215ENST00000464425 ALG10Q5BKT4 473 aa14.88□□□□□ -0.03
VPS52-215ENST00000464425 C20orf204Q6ZNR8 217 aa14.88□□□□□ -0.03
VPS52-215ENST00000464425 ZDHHC13Q8IUH4 622 aa14.88□□□□□ -0.03
VPS52-215ENST00000464425 LRRC75AQ8NAA5 344 aa14.88□□□□□ -0.03
VPS52-215ENST00000464425 TMEM54Q969K7 222 aa14.88□□□□□ -0.03
VPS52-215ENST00000464425 MBD6Q96DN6 1003 aa14.88□□□□□ -0.03
VPS52-215ENST00000464425 SLC25A44Q96H78 314 aaPredicted RBP14.88□□□□□ -0.03
VPS52-215ENST00000464425 BOD1Q96IK1 185 aa14.88□□□□□ -0.03
VPS52-215ENST00000464425 CCL19Q99731 98 aa14.88□□□□□ -0.03
VPS52-215ENST00000464425 OSBPL10Q9BXB5 764 aa14.88□□□□□ -0.03
VPS52-215ENST00000464425 NDEL1Q9GZM8 345 aa14.88□□□□□ -0.03
VPS52-215ENST00000464425 SEMA6AQ9H2E6 1030 aa14.88□□□□□ -0.03
VPS52-215ENST00000464425 GLTPQ9NZD2 209 aa14.88□□□□□ -0.03
VPS52-215ENST00000464425 POFUT2Q9Y2G5 429 aa14.88□□□□□ -0.03
VPS52-215ENST00000464425 MAGED1Q9Y5V3 778 aaPredicted RBP14.88□□□□□ -0.03
VPS52-215ENST00000464425 NDUFB2O95178 105 aa14.87□□□□□ -0.03
VPS52-215ENST00000464425 ZNF26P17031 533 aaPredicted RBP14.87□□□□□ -0.03
VPS52-215ENST00000464425 PRKACGP22612 351 aa14.87□□□□□ -0.03
VPS52-215ENST00000464425 DAP3P51398 398 aaKnown RBP14.87□□□□□ -0.03
VPS52-215ENST00000464425 CLRN1P58418 232 aa14.87□□□□□ -0.03
VPS52-215ENST00000464425 TOP3AQ13472 1001 aaPredicted RBP14.87□□□□□ -0.03
VPS52-215ENST00000464425 TESK1Q15569 626 aa14.87□□□□□ -0.03
VPS52-215ENST00000464425 ZNF672Q499Z4 452 aaPredicted RBP14.87□□□□□ -0.03
VPS52-215ENST00000464425 RPL13AP3Q6NVV1 102 aa14.87□□□□□ -0.03
VPS52-215ENST00000464425 LRFN4Q6PJG9 635 aa14.87□□□□□ -0.03
VPS52-215ENST00000464425 SMARCD3Q6STE5 483 aa14.87□□□□□ -0.03
VPS52-215ENST00000464425 SLC22A25Q6T423 547 aa14.87□□□□□ -0.03
VPS52-215ENST00000464425 RASSF6Q6ZTQ3 369 aa14.87□□□□□ -0.03
VPS52-215ENST00000464425 IGFN1Q86VF2 1251 aa14.87□□□□□ -0.03
VPS52-215ENST00000464425 HS3ST5Q8IZT8 346 aa14.87□□□□□ -0.03
VPS52-215ENST00000464425 PQLC1Q8N2U9 271 aa14.87□□□□□ -0.03
VPS52-215ENST00000464425 CLDN22Q8N7P3 220 aa14.87□□□□□ -0.03
VPS52-215ENST00000464425 SYT14Q8NB59 555 aa14.87□□□□□ -0.03
VPS52-215ENST00000464425 MAGEE2Q8TD90 523 aaPredicted RBP14.87□□□□□ -0.03
VPS52-215ENST00000464425 ASB10Q8WXI3 467 aa14.87□□□□□ -0.03
VPS52-215ENST00000464425 DNAJC9Q8WXX5 260 aa14.87□□□□□ -0.03
VPS52-215ENST00000464425 GPX7Q96SL4 187 aaPredicted RBP14.87□□□□□ -0.03
VPS52-215ENST00000464425 FOXC2Q99958 501 aa14.87□□□□□ -0.03
VPS52-215ENST00000464425 ZNF556Q9HAH1 456 aa14.87□□□□□ -0.03
VPS52-215ENST00000464425 OBP2BQ9NPH6 170 aa14.87□□□□□ -0.03
VPS52-215ENST00000464425 ARPC4-TTLL3A0A0A6YYG9 625 aa14.86□□□□□ -0.03
VPS52-215ENST00000464425 SHISA9B4DS77 424 aa14.86□□□□□ -0.03
VPS52-215ENST00000464425 IGHG1P01857 330 aa14.86□□□□□ -0.03
VPS52-215ENST00000464425 IGHMP01871 453 aa14.86□□□□□ -0.03
VPS52-215ENST00000464425 QDPRP09417 244 aa14.86□□□□□ -0.03
VPS52-215ENST00000464425 PGA4P0DJD7 388 aa14.86□□□□□ -0.03
VPS52-215ENST00000464425 PGA3P0DJD8 388 aa14.86□□□□□ -0.03
VPS52-215ENST00000464425 ZNF23P17027 643 aa14.86□□□□□ -0.03
VPS52-215ENST00000464425 CAPZA2P47755 286 aa14.86□□□□□ -0.03
VPS52-215ENST00000464425 FXYD6P3P58550 94 aa14.86□□□□□ -0.03
VPS52-215ENST00000464425 CTXN1P60606 82 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms