RNA–Protein interactions for RNA: ENST00000464001.1

ITGB1-208, Transcript of integrin subunit beta 1, humanhuman

TSL 2

Gene ITGB1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-208ENST00000464001 APOBEC3HQ6NTF7 200 aaKnown RBP3.09□□□□□ -1.91
ITGB1-208ENST00000464001 REG3GQ6UW15 175 aa3.09□□□□□ -1.91
ITGB1-208ENST00000464001 SLC25A48Q6ZT89 311 aaKnown RBP3.09□□□□□ -1.91
ITGB1-208ENST00000464001 KRTAP5-5Q701N2 237 aaPredicted RBP3.09□□□□□ -1.91
ITGB1-208ENST00000464001 APRG1Q8IVJ8 170 aa3.09□□□□□ -1.91
ITGB1-208ENST00000464001 CMTM1Q8IZ96 169 aa3.09□□□□□ -1.91
ITGB1-208ENST00000464001 JAGN1Q8N5M9 183 aa3.09□□□□□ -1.91
ITGB1-208ENST00000464001 C4orf32Q8N8J7 132 aa3.09□□□□□ -1.91
ITGB1-208ENST00000464001 CDRT4Q8N9R6 151 aa3.09□□□□□ -1.91
ITGB1-208ENST00000464001 SNX31Q8N9S9 440 aa3.09□□□□□ -1.91
ITGB1-208ENST00000464001 TTC29Q8NA56 475 aaPredicted RBP3.09□□□□□ -1.91
ITGB1-208ENST00000464001 LYPD6BQ8NI32 183 aa3.09□□□□□ -1.91
ITGB1-208ENST00000464001 BAALCQ8WXS3 180 aa3.09□□□□□ -1.91
ITGB1-208ENST00000464001 DNAJA3Q96EY1 480 aa3.09□□□□□ -1.91
ITGB1-208ENST00000464001 ZBED6CLQ96FA7 236 aaPredicted RBP3.09□□□□□ -1.91
ITGB1-208ENST00000464001 C9orf72Q96LT7 481 aa3.09□□□□□ -1.91
ITGB1-208ENST00000464001 SERPINB11Q96P15 392 aa3.09□□□□□ -1.91
ITGB1-208ENST00000464001 TNFRSF13CQ96RJ3 184 aa3.09□□□□□ -1.91
ITGB1-208ENST00000464001 C9orf16Q9BUW7 83 aa3.09□□□□□ -1.91
ITGB1-208ENST00000464001 RAB34Q9BZG1 259 aa3.09□□□□□ -1.91
ITGB1-208ENST00000464001 ULBP2Q9BZM5 246 aa3.09□□□□□ -1.91
ITGB1-208ENST00000464001 ACTR3CQ9C0K3 210 aaPredicted RBP3.09□□□□□ -1.91
ITGB1-208ENST00000464001 SLC38A1Q9H2H9 487 aa3.09□□□□□ -1.91
ITGB1-208ENST00000464001 Q9HAA7 133 aa3.09□□□□□ -1.91
ITGB1-208ENST00000464001 PLEKHA3Q9HB20 300 aa3.09□□□□□ -1.91
ITGB1-208ENST00000464001 ADGRL4Q9HBW9 690 aa3.09□□□□□ -1.91
ITGB1-208ENST00000464001 SIRT7Q9NRC8 400 aa3.09□□□□□ -1.91
ITGB1-208ENST00000464001 ABCD2Q9UBJ2 740 aa3.09□□□□□ -1.91
ITGB1-208ENST00000464001 ZNF256Q9Y2P7 627 aaPredicted RBP3.09□□□□□ -1.91
ITGB1-208ENST00000464001 RLFQ13129 1914 aa3.09□□□□□ -1.92
ITGB1-208ENST00000464001 PLB1Q6P1J6 1458 aa3.09□□□□□ -1.92
ITGB1-208ENST00000464001 BRCA1P38398 1863 aaKnown RBP3.08□□□□□ -1.92
ITGB1-208ENST00000464001 IGHV2-70DA0A0C4DH43 119 aa3.08□□□□□ -1.92
ITGB1-208ENST00000464001 hCG_38984A0A1B0GV85 526 aa3.08□□□□□ -1.92
ITGB1-208ENST00000464001 NKX6-3A6NJ46 265 aa3.08□□□□□ -1.92
ITGB1-208ENST00000464001 M0QXV9 152 aa3.08□□□□□ -1.92
ITGB1-208ENST00000464001 PDHXO00330 501 aa3.08□□□□□ -1.92
ITGB1-208ENST00000464001 NDUFAB1O14561 156 aa3.08□□□□□ -1.92
ITGB1-208ENST00000464001 GPR171O14626 319 aa3.08□□□□□ -1.92
ITGB1-208ENST00000464001 HSD17B6O14756 317 aa3.08□□□□□ -1.92
ITGB1-208ENST00000464001 PPP1R2P9O14990 202 aa3.08□□□□□ -1.92
ITGB1-208ENST00000464001 TOX3O15405 576 aaPredicted RBP3.08□□□□□ -1.92
ITGB1-208ENST00000464001 DUSP11O75319 330 aaKnown RBP3.08□□□□□ -1.92
ITGB1-208ENST00000464001 PSIP1O75475 530 aaKnown RBP3.08□□□□□ -1.92
ITGB1-208ENST00000464001 ZMPSTE24O75844 475 aa3.08□□□□□ -1.92
ITGB1-208ENST00000464001 OR7A10O76100 309 aa3.08□□□□□ -1.92
ITGB1-208ENST00000464001 FADS2O95864 444 aaKnown RBP3.08□□□□□ -1.92
ITGB1-208ENST00000464001 HOXB7P09629 217 aa3.08□□□□□ -1.92
ITGB1-208ENST00000464001 BCKDHAP12694 445 aa3.08□□□□□ -1.92
ITGB1-208ENST00000464001 MAGP20916 626 aa3.08□□□□□ -1.92
ITGB1-208ENST00000464001 BGNP21810 368 aa3.08□□□□□ -1.92
ITGB1-208ENST00000464001 EPHX2P34913 555 aa3.08□□□□□ -1.92
ITGB1-208ENST00000464001 UGT2B10P36537 528 aa3.08□□□□□ -1.92
ITGB1-208ENST00000464001 CCR8P51685 355 aa3.08□□□□□ -1.92
ITGB1-208ENST00000464001 PRELPP51888 382 aa3.08□□□□□ -1.92
ITGB1-208ENST00000464001 NDUFV3P56181 108 aaKnown RBP3.08□□□□□ -1.92
ITGB1-208ENST00000464001 PRPS1P60891 318 aa3.08□□□□□ -1.92
ITGB1-208ENST00000464001 UBE2KP61086 200 aa3.08□□□□□ -1.92
ITGB1-208ENST00000464001 DR1Q01658 176 aa3.08□□□□□ -1.92
ITGB1-208ENST00000464001 PAX2Q02962 417 aa3.08□□□□□ -1.92
ITGB1-208ENST00000464001 ZNF85Q03923 595 aa3.08□□□□□ -1.92
ITGB1-208ENST00000464001 ZNF33AQ06730 810 aa3.08□□□□□ -1.92
ITGB1-208ENST00000464001 ZNF33BQ06732 778 aa3.08□□□□□ -1.92
ITGB1-208ENST00000464001 RIPPLY1Q0D2K3 151 aa3.08□□□□□ -1.92
ITGB1-208ENST00000464001 SCRN3Q0VDG4 424 aa3.08□□□□□ -1.92
ITGB1-208ENST00000464001 ST3GAL3Q11203 375 aa3.08□□□□□ -1.92
ITGB1-208ENST00000464001 CD226Q15762 336 aa3.08□□□□□ -1.92
ITGB1-208ENST00000464001 KCTD19Q17RG1 926 aaPredicted RBP3.08□□□□□ -1.92
ITGB1-208ENST00000464001 RPEL1Q2QD12 228 aa3.08□□□□□ -1.92
ITGB1-208ENST00000464001 COQ5Q5HYK3 327 aa3.08□□□□□ -1.92
ITGB1-208ENST00000464001 TMEM31Q5JXX7 168 aa3.08□□□□□ -1.92
ITGB1-208ENST00000464001 FAM120AOSQ5T036 256 aa3.08□□□□□ -1.92
ITGB1-208ENST00000464001 ADNP2Q6IQ32 1131 aa3.08□□□□□ -1.92
ITGB1-208ENST00000464001 FAHD2BQ6P2I3 314 aaPredicted RBP3.08□□□□□ -1.92
ITGB1-208ENST00000464001 PRMT9Q6P2P2 845 aa3.08□□□□□ -1.92
ITGB1-208ENST00000464001 CLEC18BQ6UXF7 455 aa3.08□□□□□ -1.92
ITGB1-208ENST00000464001 STAC2Q6ZMT1 411 aa3.08□□□□□ -1.92
ITGB1-208ENST00000464001 PLEKHG7Q6ZR37 379 aa3.08□□□□□ -1.92
ITGB1-208ENST00000464001 LINC00336Q6ZUF6 198 aa3.08□□□□□ -1.92
ITGB1-208ENST00000464001 PRSS48Q7RTY5 328 aa3.08□□□□□ -1.92
ITGB1-208ENST00000464001 APOBEC3FQ8IUX4 373 aaKnown RBP3.08□□□□□ -1.92
ITGB1-208ENST00000464001 FUNDC1Q8IVP5 155 aa3.08□□□□□ -1.92
ITGB1-208ENST00000464001 IQCKQ8N0W5 287 aa3.08□□□□□ -1.92
ITGB1-208ENST00000464001 CD177Q8N6Q3 437 aa3.08□□□□□ -1.92
ITGB1-208ENST00000464001 C15orf54Q8N8G6 183 aa3.08□□□□□ -1.92
ITGB1-208ENST00000464001 OR2T33Q8NG76 320 aa3.08□□□□□ -1.92
ITGB1-208ENST00000464001 OR1S2Q8NGQ3 325 aa3.08□□□□□ -1.92
ITGB1-208ENST00000464001 OR1K1Q8NGR3 316 aa3.08□□□□□ -1.92
ITGB1-208ENST00000464001 OR2L8Q8NGY9 312 aa3.08□□□□□ -1.92
ITGB1-208ENST00000464001 TBCKQ8TEA7 893 aa3.08□□□□□ -1.92
ITGB1-208ENST00000464001 AGAP11Q8TF27 550 aa3.08□□□□□ -1.92
ITGB1-208ENST00000464001 BIRC7Q96CA5 298 aa3.08□□□□□ -1.92
ITGB1-208ENST00000464001 RAB3CQ96E17 227 aa3.08□□□□□ -1.92
ITGB1-208ENST00000464001 FAHD2AQ96GK7 314 aa3.08□□□□□ -1.92
ITGB1-208ENST00000464001 TSG101Q99816 390 aa3.08□□□□□ -1.92
ITGB1-208ENST00000464001 ZNF670Q9BS34 389 aa3.08□□□□□ -1.92
ITGB1-208ENST00000464001 OCR1Q9BZK8 76 aa3.08□□□□□ -1.92
ITGB1-208ENST00000464001 SRRQ9GZT4 340 aa3.08□□□□□ -1.92
ITGB1-208ENST00000464001 SAV1Q9H4B6 383 aaPredicted RBP3.08□□□□□ -1.92
ITGB1-208ENST00000464001 NHEJ1Q9H9Q4 299 aaPredicted RBP3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms