RNA–Protein interactions for RNA: ENST00000463372.5

C9orf3-211, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 919 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-211ENST00000463372 THY1P04216 161 aa10.93□□□□□ -0.66
C9orf3-211ENST00000463372 ZNF26P17031 533 aaPredicted RBP10.93□□□□□ -0.66
C9orf3-211ENST00000463372 ARL4CP56559 192 aa10.93□□□□□ -0.66
C9orf3-211ENST00000463372 TP53BP2Q13625 1128 aa10.93□□□□□ -0.66
C9orf3-211ENST00000463372 LY6EQ16553 131 aa10.93□□□□□ -0.66
C9orf3-211ENST00000463372 FAM153CQ494X1 144 aa10.93□□□□□ -0.66
C9orf3-211ENST00000463372 TEX35Q5T0J7 233 aa10.93□□□□□ -0.66
C9orf3-211ENST00000463372 CARD17Q5XLA6 110 aa10.93□□□□□ -0.66
C9orf3-211ENST00000463372 CCDC91Q7Z6B0 441 aa10.93□□□□□ -0.66
C9orf3-211ENST00000463372 METTL6Q8TCB7 284 aa10.93□□□□□ -0.66
C9orf3-211ENST00000463372 PPCDCQ96CD2 204 aa10.93□□□□□ -0.66
C9orf3-211ENST00000463372 DDOQ99489 341 aa10.93□□□□□ -0.66
C9orf3-211ENST00000463372 MEGF9Q9H1U4 602 aa10.93□□□□□ -0.66
C9orf3-211ENST00000463372 ZMAT4Q9H898 229 aa10.93□□□□□ -0.66
C9orf3-211ENST00000463372 EXOSC3Q9NQT5 275 aaKnown RBP10.93□□□□□ -0.66
C9orf3-211ENST00000463372 SERTAD4Q9NUC0 356 aa10.93□□□□□ -0.66
C9orf3-211ENST00000463372 SH3BP4Q9P0V3 963 aa10.93□□□□□ -0.66
C9orf3-211ENST00000463372 TBK1Q9UHD2 729 aa10.93□□□□□ -0.66
C9orf3-211ENST00000463372 ZNF225Q9UK10 706 aa10.93□□□□□ -0.66
C9orf3-211ENST00000463372 MKLN1Q9UL63 735 aa10.93□□□□□ -0.66
C9orf3-211ENST00000463372 PRAMEF27A3QJZ7 478 aa10.92□□□□□ -0.66
C9orf3-211ENST00000463372 GOLGA6L22H0YM25 854 aa10.92□□□□□ -0.66
C9orf3-211ENST00000463372 IFNL4K9M1U5 179 aa10.92□□□□□ -0.66
C9orf3-211ENST00000463372 SMIM24O75264 130 aa10.92□□□□□ -0.66
C9orf3-211ENST00000463372 KLHL2O95198 593 aa10.92□□□□□ -0.66
C9orf3-211ENST00000463372 CXCR5P32302 372 aa10.92□□□□□ -0.66
C9orf3-211ENST00000463372 PDIA2Q13087 525 aaKnown RBP10.92□□□□□ -0.66
C9orf3-211ENST00000463372 TMEM255AQ5JRV8 349 aa10.92□□□□□ -0.66
C9orf3-211ENST00000463372 GRTP1Q5TC63 336 aa10.92□□□□□ -0.66
C9orf3-211ENST00000463372 MBNL2Q5VZF2 373 aaKnown RBP10.92□□□□□ -0.66
C9orf3-211ENST00000463372 TMEM53Q6P2H8 277 aa10.92□□□□□ -0.66
C9orf3-211ENST00000463372 SKA3Q8IX90 412 aa10.92□□□□□ -0.66
C9orf3-211ENST00000463372 TMEM123Q8N131 208 aa10.92□□□□□ -0.66
C9orf3-211ENST00000463372 FGFBP3Q8TAT2 258 aa10.92□□□□□ -0.66
C9orf3-211ENST00000463372 KLF14Q8TD94 323 aaPredicted RBP10.92□□□□□ -0.66
C9orf3-211ENST00000463372 C10orf82Q8WW14 230 aa10.92□□□□□ -0.66
C9orf3-211ENST00000463372 OXGR1Q96P68 337 aa10.92□□□□□ -0.66
C9orf3-211ENST00000463372 TECTBQ96PL2 329 aa10.92□□□□□ -0.66
C9orf3-211ENST00000463372 HIF3AQ9Y2N7 669 aa10.92□□□□□ -0.66
C9orf3-211ENST00000463372 IQCMA0A1B0GVH7 501 aa10.91□□□□□ -0.66
C9orf3-211ENST00000463372 A0A1B0GW55 424 aa10.91□□□□□ -0.66
C9orf3-211ENST00000463372 FBP2O00757 339 aa10.91□□□□□ -0.66
C9orf3-211ENST00000463372 AP3D1O14617 1153 aa10.91□□□□□ -0.66
C9orf3-211ENST00000463372 SURF4O15260 269 aa10.91□□□□□ -0.66
C9orf3-211ENST00000463372 SLC25A17O43808 307 aa10.91□□□□□ -0.66
C9orf3-211ENST00000463372 FCMRO60667 390 aa10.91□□□□□ -0.66
C9orf3-211ENST00000463372 ENTPD5O75356 428 aa10.91□□□□□ -0.66
C9orf3-211ENST00000463372 QDPRP09417 244 aa10.91□□□□□ -0.66
C9orf3-211ENST00000463372 DUX4L2P0CJ85 424 aa10.91□□□□□ -0.66
C9orf3-211ENST00000463372 DUX4L3P0CJ86 424 aa10.91□□□□□ -0.66
C9orf3-211ENST00000463372 DUX4L5P0CJ88 424 aa10.91□□□□□ -0.66
C9orf3-211ENST00000463372 DUX4L6P0CJ89 424 aa10.91□□□□□ -0.66
C9orf3-211ENST00000463372 DUX4L7P0CJ90 424 aa10.91□□□□□ -0.66
C9orf3-211ENST00000463372 EFNA1P20827 205 aaPredicted RBP10.91□□□□□ -0.66
C9orf3-211ENST00000463372 CCNOP22674 350 aa10.91□□□□□ -0.66
C9orf3-211ENST00000463372 EEF1B2P24534 225 aaKnown RBP10.91□□□□□ -0.66
C9orf3-211ENST00000463372 FRKP42685 505 aaPredicted RBP10.91□□□□□ -0.66
C9orf3-211ENST00000463372 NPY4RP50391 375 aa10.91□□□□□ -0.66
C9orf3-211ENST00000463372 HTR6P50406 440 aa10.91□□□□□ -0.66
C9orf3-211ENST00000463372 ANXA11P50995 505 aaKnown RBP10.91□□□□□ -0.66
C9orf3-211ENST00000463372 ARF6P62330 175 aa10.91□□□□□ -0.66
C9orf3-211ENST00000463372 FASTKD3Q14CZ7 662 aaKnown RBP10.91□□□□□ -0.66
C9orf3-211ENST00000463372 ZNF404Q494X3 552 aa10.91□□□□□ -0.66
C9orf3-211ENST00000463372 ZNF385BQ569K4 471 aa10.91□□□□□ -0.66
C9orf3-211ENST00000463372 MTX3Q5HYI7 312 aa10.91□□□□□ -0.66
C9orf3-211ENST00000463372 DUX4L9Q6RFH8 374 aaPredicted RBP10.91□□□□□ -0.66
C9orf3-211ENST00000463372 UNQ6126/PRO20091Q6UXV3 157 aa10.91□□□□□ -0.66
C9orf3-211ENST00000463372 NHLRC1Q6VVB1 395 aa10.91□□□□□ -0.66
C9orf3-211ENST00000463372 SBSPONQ8IVN8 264 aa10.91□□□□□ -0.66
C9orf3-211ENST00000463372 CTAGE3PQ8IX95 158 aa10.91□□□□□ -0.66
C9orf3-211ENST00000463372 C20orf196Q8IYI0 205 aa10.91□□□□□ -0.66
C9orf3-211ENST00000463372 ZNF101Q8IZC7 436 aa10.91□□□□□ -0.66
C9orf3-211ENST00000463372 VPS37AQ8NEZ2 397 aa10.91□□□□□ -0.66
C9orf3-211ENST00000463372 OR2Z1Q8NG97 314 aa10.91□□□□□ -0.66
C9orf3-211ENST00000463372 OR56A1Q8NGH5 318 aa10.91□□□□□ -0.66
C9orf3-211ENST00000463372 FAM76AQ8TAV0 307 aa10.91□□□□□ -0.66
C9orf3-211ENST00000463372 ZNF483Q8TF39 744 aaPredicted RBP10.91□□□□□ -0.66
C9orf3-211ENST00000463372 WIPF2Q8TF74 440 aaPredicted RBP10.91□□□□□ -0.66
C9orf3-211ENST00000463372 ITLN1Q8WWA0 313 aa10.91□□□□□ -0.66
C9orf3-211ENST00000463372 ZNF764Q96H86 408 aaPredicted RBP10.91□□□□□ -0.66
C9orf3-211ENST00000463372 EGLN2Q96KS0 407 aa10.91□□□□□ -0.66
C9orf3-211ENST00000463372 OR7D2Q96RA2 312 aa10.91□□□□□ -0.66
C9orf3-211ENST00000463372 PRR25Q96S07 402 aa10.91□□□□□ -0.66
C9orf3-211ENST00000463372 NKX3-1Q99801 234 aaPredicted RBP10.91□□□□□ -0.66
C9orf3-211ENST00000463372 FAM234AQ9H0X4 552 aa10.91□□□□□ -0.66
C9orf3-211ENST00000463372 DUX4Q9UBX2 424 aa10.91□□□□□ -0.66
C9orf3-211ENST00000463372 TIMM8AO60220 97 aaPredicted RBP10.9□□□□□ -0.66
C9orf3-211ENST00000463372 AK1P00568 194 aa10.9□□□□□ -0.66
C9orf3-211ENST00000463372 C2P06681 752 aa10.9□□□□□ -0.66
C9orf3-211ENST00000463372 RPS17P08708 135 aaKnown RBP10.9□□□□□ -0.66
C9orf3-211ENST00000463372 PNMTP11086 282 aa10.9□□□□□ -0.66
C9orf3-211ENST00000463372 UQCRBP14927 111 aa10.9□□□□□ -0.66
C9orf3-211ENST00000463372 CCT3P49368 545 aaKnown RBP10.9□□□□□ -0.66
C9orf3-211ENST00000463372 CD83Q01151 205 aa10.9□□□□□ -0.66
C9orf3-211ENST00000463372 PLP2Q04941 152 aa10.9□□□□□ -0.66
C9orf3-211ENST00000463372 HABP2Q14520 560 aaPredicted RBP10.9□□□□□ -0.66
C9orf3-211ENST00000463372 CHI3L2Q15782 390 aa10.9□□□□□ -0.66
C9orf3-211ENST00000463372 MAPK14Q16539 360 aa10.9□□□□□ -0.66
C9orf3-211ENST00000463372 SPDYE7PQ495Y7 208 aa10.9□□□□□ -0.66
C9orf3-211ENST00000463372 CAVIN1Q6NZI2 390 aaKnown RBP10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms