RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 ZNF229Q9UJW7 825 aa6.87□□□□□ -1.31
CDC42BPA-210ENST00000462553 MOKQ9UQ07 419 aa6.87□□□□□ -1.31
CDC42BPA-210ENST00000462553 FKBP7Q9Y680 259 aa6.87□□□□□ -1.31
CDC42BPA-210ENST00000462553 ZNF587BE7ETH6 402 aa6.86□□□□□ -1.31
CDC42BPA-210ENST00000462553 C11orf98E9PRG8 122 aa6.86□□□□□ -1.31
CDC42BPA-210ENST00000462553 RPL36A-HNRNPH2H7BZ11 118 aa6.86□□□□□ -1.31
CDC42BPA-210ENST00000462553 ARPC2O15144 300 aa6.86□□□□□ -1.31
CDC42BPA-210ENST00000462553 GSTA4O15217 222 aa6.86□□□□□ -1.31
CDC42BPA-210ENST00000462553 SLC43A1O75387 559 aa6.86□□□□□ -1.31
CDC42BPA-210ENST00000462553 OR7A10O76100 309 aa6.86□□□□□ -1.31
CDC42BPA-210ENST00000462553 IFNW1P05000 195 aa6.86□□□□□ -1.31
CDC42BPA-210ENST00000462553 APEHP13798 732 aaKnown RBP6.86□□□□□ -1.31
CDC42BPA-210ENST00000462553 NQO1P15559 274 aaKnown RBP6.86□□□□□ -1.31
CDC42BPA-210ENST00000462553 ZNF23P17027 643 aa6.86□□□□□ -1.31
CDC42BPA-210ENST00000462553 FUT1P19526 365 aa6.86□□□□□ -1.31
CDC42BPA-210ENST00000462553 TCN1P20061 433 aaPredicted RBP6.86□□□□□ -1.31
CDC42BPA-210ENST00000462553 IL2RGP31785 369 aa6.86□□□□□ -1.31
CDC42BPA-210ENST00000462553 MSX2P35548 267 aaPredicted RBP6.86□□□□□ -1.31
CDC42BPA-210ENST00000462553 ROR2Q01974 943 aaKnown RBP6.86□□□□□ -1.31
CDC42BPA-210ENST00000462553 CHRNB3Q05901 458 aa6.86□□□□□ -1.31
CDC42BPA-210ENST00000462553 PMS2P3Q13401 168 aa6.86□□□□□ -1.31
CDC42BPA-210ENST00000462553 FHL1Q13642 323 aa6.86□□□□□ -1.31
CDC42BPA-210ENST00000462553 ADIPOQQ15848 244 aa6.86□□□□□ -1.31
CDC42BPA-210ENST00000462553 SAMD4BQ5PRF9 694 aaKnown RBP6.86□□□□□ -1.31
CDC42BPA-210ENST00000462553 GKAP1Q5VSY0 366 aaPredicted RBP6.86□□□□□ -1.31
CDC42BPA-210ENST00000462553 GLYATQ6IB77 296 aa6.86□□□□□ -1.31
CDC42BPA-210ENST00000462553 PXKQ7Z7A4 578 aa6.86□□□□□ -1.31
CDC42BPA-210ENST00000462553 MYPOPQ86VE0 399 aaPredicted RBP6.86□□□□□ -1.31
CDC42BPA-210ENST00000462553 MEX3DQ86XN8 651 aaKnown RBP6.86□□□□□ -1.31
CDC42BPA-210ENST00000462553 UEVLDQ8IX04 471 aa6.86□□□□□ -1.31
CDC42BPA-210ENST00000462553 C20orf196Q8IYI0 205 aa6.86□□□□□ -1.31
CDC42BPA-210ENST00000462553 DEFB107AQ8IZN7 70 aa6.86□□□□□ -1.31
CDC42BPA-210ENST00000462553 CCDC197Q8NCU1 140 aa6.86□□□□□ -1.31
CDC42BPA-210ENST00000462553 OR1K1Q8NGR3 316 aa6.86□□□□□ -1.31
CDC42BPA-210ENST00000462553 LIPHQ8WWY8 451 aa6.86□□□□□ -1.31
CDC42BPA-210ENST00000462553 LZICQ8WZA0 190 aa6.86□□□□□ -1.31
CDC42BPA-210ENST00000462553 BCL2L2Q92843 193 aaPredicted RBP6.86□□□□□ -1.31
CDC42BPA-210ENST00000462553 C1orf159Q96HA4 380 aa6.86□□□□□ -1.31
CDC42BPA-210ENST00000462553 DHRS1Q96LJ7 313 aa6.86□□□□□ -1.31
CDC42BPA-210ENST00000462553 FOXN4Q96NZ1 517 aa6.86□□□□□ -1.31
CDC42BPA-210ENST00000462553 CDRT15Q96T59 188 aa6.86□□□□□ -1.31
CDC42BPA-210ENST00000462553 EMC6Q9BV81 110 aa6.86□□□□□ -1.31
CDC42BPA-210ENST00000462553 GORASP2Q9H8Y8 452 aa6.86□□□□□ -1.31
CDC42BPA-210ENST00000462553 GPR35Q9HC97 309 aa6.86□□□□□ -1.31
CDC42BPA-210ENST00000462553 NANSQ9NR45 359 aa6.86□□□□□ -1.31
CDC42BPA-210ENST00000462553 DCAF13Q9NV06 445 aaKnown RBP6.86□□□□□ -1.31
CDC42BPA-210ENST00000462553 RHCGQ9UBD6 479 aa6.86□□□□□ -1.31
CDC42BPA-210ENST00000462553 NOX1Q9Y5S8 564 aa6.86□□□□□ -1.31
CDC42BPA-210ENST00000462553 ENPP4Q9Y6X5 453 aa6.86□□□□□ -1.31
CDC42BPA-210ENST00000462553 PMF1-BGLAPU3KQ54 211 aa6.86□□□□□ -1.31
CDC42BPA-210ENST00000462553 A0A087WUU8 490 aa6.85□□□□□ -1.31
CDC42BPA-210ENST00000462553 ARPC4-TTLL3A0A0A6YYG9 625 aa6.85□□□□□ -1.31
CDC42BPA-210ENST00000462553 LOC390937A0A1W2PQ73 354 aa6.85□□□□□ -1.31
CDC42BPA-210ENST00000462553 ZNF503-AS2A6NEH8 195 aa6.85□□□□□ -1.31
CDC42BPA-210ENST00000462553 OR6C65A6NJZ3 312 aa6.85□□□□□ -1.31
CDC42BPA-210ENST00000462553 AKAP8O43823 692 aaKnown RBP6.85□□□□□ -1.31
CDC42BPA-210ENST00000462553 PDE5AO76074 875 aa6.85□□□□□ -1.31
CDC42BPA-210ENST00000462553 IGLV1-44P01699 117 aa6.85□□□□□ -1.31
CDC42BPA-210ENST00000462553 IGFBP1P08833 259 aaPredicted RBP6.85□□□□□ -1.31
CDC42BPA-210ENST00000462553 ADORA3P0DMS8 318 aa6.85□□□□□ -1.31
CDC42BPA-210ENST00000462553 BMP4P12644 408 aa6.85□□□□□ -1.31
CDC42BPA-210ENST00000462553 IFNGR1P15260 489 aa6.85□□□□□ -1.31
CDC42BPA-210ENST00000462553 MAKP20794 623 aa6.85□□□□□ -1.31
CDC42BPA-210ENST00000462553 ATP6V1B2P21281 511 aa6.85□□□□□ -1.31
CDC42BPA-210ENST00000462553 CALCRP30988 508 aa6.85□□□□□ -1.31
CDC42BPA-210ENST00000462553 PRPS1P60891 318 aa6.85□□□□□ -1.31
CDC42BPA-210ENST00000462553 SNRPD2P62316 118 aaKnown RBP6.85□□□□□ -1.31
CDC42BPA-210ENST00000462553 TUBA1BP68363 451 aa6.85□□□□□ -1.31
CDC42BPA-210ENST00000462553 TUBA4AP68366 448 aa6.85□□□□□ -1.31
CDC42BPA-210ENST00000462553 IL1RL1Q01638 556 aa6.85□□□□□ -1.31
CDC42BPA-210ENST00000462553 RUNX1T1Q06455 604 aa6.85□□□□□ -1.31
CDC42BPA-210ENST00000462553 RPL18Q07020 188 aaKnown RBP6.85□□□□□ -1.31
CDC42BPA-210ENST00000462553 ST3GAL3Q11203 375 aa6.85□□□□□ -1.31
CDC42BPA-210ENST00000462553 CAMK2DQ13557 499 aa6.85□□□□□ -1.31
CDC42BPA-210ENST00000462553 C1DQ13901 141 aaKnown RBP6.85□□□□□ -1.31
CDC42BPA-210ENST00000462553 MELKQ14680 651 aa6.85□□□□□ -1.31
CDC42BPA-210ENST00000462553 TRAM2Q15035 370 aa6.85□□□□□ -1.31
CDC42BPA-210ENST00000462553 EFNB3Q15768 340 aa6.85□□□□□ -1.31
CDC42BPA-210ENST00000462553 CR1LQ2VPA4 569 aa6.85□□□□□ -1.31
CDC42BPA-210ENST00000462553 TBRG1Q3YBR2 411 aa6.85□□□□□ -1.31
CDC42BPA-210ENST00000462553 C1QTNF12Q5T7M4 302 aa6.85□□□□□ -1.31
CDC42BPA-210ENST00000462553 C16orf89Q6UX73 402 aa6.85□□□□□ -1.31
CDC42BPA-210ENST00000462553 RINLQ6ZS11 566 aa6.85□□□□□ -1.31
CDC42BPA-210ENST00000462553 TUBA1AQ71U36 451 aa6.85□□□□□ -1.31
CDC42BPA-210ENST00000462553 NANOGNBQ7Z5D8 188 aa6.85□□□□□ -1.31
CDC42BPA-210ENST00000462553 C10orf53Q8N6V4 93 aa6.85□□□□□ -1.31
CDC42BPA-210ENST00000462553 PIK3C3Q8NEB9 887 aa6.85□□□□□ -1.31
CDC42BPA-210ENST00000462553 MOSPD2Q8NHP6 518 aa6.85□□□□□ -1.31
CDC42BPA-210ENST00000462553 MAGEE2Q8TD90 523 aaPredicted RBP6.85□□□□□ -1.31
CDC42BPA-210ENST00000462553 SGTBQ96EQ0 304 aa6.85□□□□□ -1.31
CDC42BPA-210ENST00000462553 NSL1Q96IY1 281 aa6.85□□□□□ -1.31
CDC42BPA-210ENST00000462553 LRR1Q96L50 414 aa6.85□□□□□ -1.31
CDC42BPA-210ENST00000462553 SLC38A2Q96QD8 506 aa6.85□□□□□ -1.31
CDC42BPA-210ENST00000462553 FUZQ9BT04 418 aa6.85□□□□□ -1.31
CDC42BPA-210ENST00000462553 KATNB1Q9BVA0 655 aa6.85□□□□□ -1.31
CDC42BPA-210ENST00000462553 PLK3Q9H4B4 646 aa6.85□□□□□ -1.31
CDC42BPA-210ENST00000462553 MYOZ1Q9NP98 299 aaPredicted RBP6.85□□□□□ -1.31
CDC42BPA-210ENST00000462553 CA10Q9NS85 328 aa6.85□□□□□ -1.31
CDC42BPA-210ENST00000462553 NDUFAF4Q9P032 175 aa6.85□□□□□ -1.31
CDC42BPA-210ENST00000462553 CRNNQ9UBG3 495 aaPredicted RBP6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms