RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 HIST3H3Q16695 136 aa16.34■□□□□ 0.21
VARS-220ENST00000461874 MSMPQ1L6U9 139 aa16.34■□□□□ 0.21
VARS-220ENST00000461874 CHRFAM7AQ494W8 412 aa16.34■□□□□ 0.21
VARS-220ENST00000461874 LRRC23Q53EV4 343 aaPredicted RBP16.34■□□□□ 0.21
VARS-220ENST00000461874 MICU2Q8IYU8 434 aa16.34■□□□□ 0.21
VARS-220ENST00000461874 CDK20Q8IZL9 346 aa16.34■□□□□ 0.21
VARS-220ENST00000461874 LIPHQ8WWY8 451 aa16.34■□□□□ 0.21
VARS-220ENST00000461874 MRPL24Q96A35 216 aaKnown RBP16.34■□□□□ 0.21
VARS-220ENST00000461874 RCN3Q96D15 328 aa16.34■□□□□ 0.21
VARS-220ENST00000461874 MRPL13Q9BYD1 178 aaKnown RBP16.34■□□□□ 0.21
VARS-220ENST00000461874 DYNLRB1Q9NP97 96 aa16.34■□□□□ 0.21
VARS-220ENST00000461874 YLPM1P49750 1951 aaKnown RBP16.34■□□□□ 0.21
VARS-220ENST00000461874 FBN1P35555 2871 aaKnown RBP16.34■□□□□ 0.21
VARS-220ENST00000461874 IGHV4-61A0A0C4DH41 118 aa16.33■□□□□ 0.2
VARS-220ENST00000461874 ELOVL7A1L3X0 281 aa16.33■□□□□ 0.2
VARS-220ENST00000461874 SERPINA5P05154 406 aa16.33■□□□□ 0.2
VARS-220ENST00000461874 TSPAN19P0C672 248 aa16.33■□□□□ 0.2
VARS-220ENST00000461874 AQP2P41181 271 aa16.33■□□□□ 0.2
VARS-220ENST00000461874 GZMKP49863 264 aa16.33■□□□□ 0.2
VARS-220ENST00000461874 SELENOWP63302 87 aa16.33■□□□□ 0.2
VARS-220ENST00000461874 ZNF584Q8IVC4 421 aa16.33■□□□□ 0.2
VARS-220ENST00000461874 POU5F2Q8N7G0 328 aa16.33■□□□□ 0.2
VARS-220ENST00000461874 ZNF540Q8NDQ6 660 aa16.33■□□□□ 0.2
VARS-220ENST00000461874 RP9Q8TA86 221 aaKnown RBP16.33■□□□□ 0.2
VARS-220ENST00000461874 MCHR2Q969V1 340 aa16.33■□□□□ 0.2
VARS-220ENST00000461874 TPD52L3Q96J77 140 aa16.33■□□□□ 0.2
VARS-220ENST00000461874 KCNK17Q96T54 332 aa16.33■□□□□ 0.2
VARS-220ENST00000461874 SEPHS2Q99611 448 aa16.33■□□□□ 0.2
VARS-220ENST00000461874 SH3GL3Q99963 347 aa16.33■□□□□ 0.2
VARS-220ENST00000461874 MRPL37Q9BZE1 423 aaKnown RBP16.33■□□□□ 0.2
VARS-220ENST00000461874 INIPQ9NRY2 104 aa16.33■□□□□ 0.2
VARS-220ENST00000461874 TMEM160Q9NX00 188 aa16.33■□□□□ 0.2
VARS-220ENST00000461874 CMTM6Q9NX76 183 aa16.33■□□□□ 0.2
VARS-220ENST00000461874 AP3M1Q9Y2T2 418 aa16.33■□□□□ 0.2
VARS-220ENST00000461874 MED31Q9Y3C7 131 aa16.33■□□□□ 0.2
VARS-220ENST00000461874 CENPBD1B2RD01 187 aa16.32■□□□□ 0.2
VARS-220ENST00000461874 FARS2O95363 451 aaKnown RBP16.32■□□□□ 0.2
VARS-220ENST00000461874 STAMBPO95630 424 aa16.32■□□□□ 0.2
VARS-220ENST00000461874 ADRA2AP08913 450 aa16.32■□□□□ 0.2
VARS-220ENST00000461874 DAOP14920 347 aa16.32■□□□□ 0.2
VARS-220ENST00000461874 CLRN1P58418 232 aa16.32■□□□□ 0.2
VARS-220ENST00000461874 GALK2Q01415 458 aa16.32■□□□□ 0.2
VARS-220ENST00000461874 FXNQ16595 210 aa16.32■□□□□ 0.2
VARS-220ENST00000461874 HSP90B2PQ58FF3 399 aa16.32■□□□□ 0.2
VARS-220ENST00000461874 GKAP1Q5VSY0 366 aaPredicted RBP16.32■□□□□ 0.2
VARS-220ENST00000461874 HDDC2Q7Z4H3 204 aa16.32■□□□□ 0.2
VARS-220ENST00000461874 OR4K5Q8NGD3 323 aa16.32■□□□□ 0.2
VARS-220ENST00000461874 MOSPD2Q8NHP6 518 aa16.32■□□□□ 0.2
VARS-220ENST00000461874 ASB10Q8WXI3 467 aa16.32■□□□□ 0.2
VARS-220ENST00000461874 ZNF347Q96SE7 839 aa16.32■□□□□ 0.2
VARS-220ENST00000461874 BPESC1Q9GZL8 116 aa16.32■□□□□ 0.2
VARS-220ENST00000461874 CDC42EP3Q9UKI2 254 aa16.32■□□□□ 0.2
VARS-220ENST00000461874 MCIDASD6RGH6 385 aa16.31■□□□□ 0.2
VARS-220ENST00000461874 SYNGR3O43761 229 aa16.31■□□□□ 0.2
VARS-220ENST00000461874 TRMUO75648 421 aaKnown RBP16.31■□□□□ 0.2
VARS-220ENST00000461874 IFNA2P01563 188 aa16.31■□□□□ 0.2
VARS-220ENST00000461874 APEHP13798 732 aaKnown RBP16.31■□□□□ 0.2
VARS-220ENST00000461874 ACADSP16219 412 aa16.31■□□□□ 0.2
VARS-220ENST00000461874 ZNF16P17020 682 aaPredicted RBP16.31■□□□□ 0.2
VARS-220ENST00000461874 GIFP27352 417 aa16.31■□□□□ 0.2
VARS-220ENST00000461874 DAP3P51398 398 aaKnown RBP16.31■□□□□ 0.2
VARS-220ENST00000461874 RPS23P62266 143 aaKnown RBP16.31■□□□□ 0.2
VARS-220ENST00000461874 ST3GAL3Q11203 375 aa16.31■□□□□ 0.2
VARS-220ENST00000461874 NRN1LQ496H8 165 aa16.31■□□□□ 0.2
VARS-220ENST00000461874 IQCCQ4KMZ1 466 aa16.31■□□□□ 0.2
VARS-220ENST00000461874 ARMC4Q5T2S8 1044 aa16.31■□□□□ 0.2
VARS-220ENST00000461874 ARPINQ7Z6K5 226 aa16.31■□□□□ 0.2
VARS-220ENST00000461874 DPPA2Q7Z7J5 298 aa16.31■□□□□ 0.2
VARS-220ENST00000461874 SLC15A3Q8IY34 581 aa16.31■□□□□ 0.2
VARS-220ENST00000461874 ZNF786Q8N393 782 aa16.31■□□□□ 0.2
VARS-220ENST00000461874 SYT14Q8NB59 555 aa16.31■□□□□ 0.2
VARS-220ENST00000461874 NOXO1Q8NFA2 376 aa16.31■□□□□ 0.2
VARS-220ENST00000461874 PRRC1Q96M27 445 aa16.31■□□□□ 0.2
VARS-220ENST00000461874 GMPR2Q9P2T1 348 aaKnown RBP16.31■□□□□ 0.2
VARS-220ENST00000461874 REV1Q9UBZ9 1251 aa16.31■□□□□ 0.2
VARS-220ENST00000461874 A4GNTQ9UNA3 340 aa16.31■□□□□ 0.2
VARS-220ENST00000461874 HTR3EA5X5Y0 456 aa16.3■□□□□ 0.2
VARS-220ENST00000461874 COX4I1P13073 169 aa16.3■□□□□ 0.2
VARS-220ENST00000461874 ZNF23P17027 643 aa16.3■□□□□ 0.2
VARS-220ENST00000461874 LSP1P33241 339 aa16.3■□□□□ 0.2
VARS-220ENST00000461874 MDH1P40925 334 aaKnown RBP16.3■□□□□ 0.2
VARS-220ENST00000461874 ZNF84P51523 738 aa16.3■□□□□ 0.2
VARS-220ENST00000461874 ZNF133P52736 654 aaPredicted RBP16.3■□□□□ 0.2
VARS-220ENST00000461874 MYBPC1Q00872 1141 aa16.3■□□□□ 0.2
VARS-220ENST00000461874 LAPTM4AQ15012 233 aa16.3■□□□□ 0.2
VARS-220ENST00000461874 TMEM53Q6P2H8 277 aa16.3■□□□□ 0.2
VARS-220ENST00000461874 PODNL1Q6PEZ8 512 aa16.3■□□□□ 0.2
VARS-220ENST00000461874 SLC16A14Q7RTX9 510 aa16.3■□□□□ 0.2
VARS-220ENST00000461874 UBASH3BQ8TF42 649 aa16.3■□□□□ 0.2
VARS-220ENST00000461874 LZICQ8WZA0 190 aa16.3■□□□□ 0.2
VARS-220ENST00000461874 SYT3Q9BQG1 590 aa16.3■□□□□ 0.2
VARS-220ENST00000461874 MED4Q9NPJ6 270 aa16.3■□□□□ 0.2
VARS-220ENST00000461874 STX18Q9P2W9 335 aaKnown RBP16.3■□□□□ 0.2
VARS-220ENST00000461874 SLC7A8Q9UHI5 535 aa16.3■□□□□ 0.2
VARS-220ENST00000461874 MALRD1Q5VYJ5 2156 aa16.3■□□□□ 0.2
VARS-220ENST00000461874 NPIPB13A6NJU9 1138 aa16.29■□□□□ 0.2
VARS-220ENST00000461874 NPIPB4C9JG80 1138 aa16.29■□□□□ 0.2
VARS-220ENST00000461874 M0R233 179 aa16.29■□□□□ 0.2
VARS-220ENST00000461874 PIP5K1CO60331 668 aa16.29■□□□□ 0.2
VARS-220ENST00000461874 LMX1BO60663 402 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms