RNA–Protein interactions for RNA: ENST00000460289.5

PTPN4-208, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-208ENST00000460289 B9A039 149 aa19.94■□□□□ 0.78
PTPN4-208ENST00000460289 SSX4O60224 188 aa19.94■□□□□ 0.78
PTPN4-208ENST00000460289 PRSS23O95084 383 aa19.94■□□□□ 0.78
PTPN4-208ENST00000460289 PTDSS1P48651 473 aaKnown RBP19.94■□□□□ 0.78
PTPN4-208ENST00000460289 ZNF84P51523 738 aa19.94■□□□□ 0.78
PTPN4-208ENST00000460289 DSCR9P59020 149 aa19.94■□□□□ 0.78
PTPN4-208ENST00000460289 SNRPD2P62316 118 aaKnown RBP19.94■□□□□ 0.78
PTPN4-208ENST00000460289 MST1LQ2TV78 715 aa19.94■□□□□ 0.78
PTPN4-208ENST00000460289 NRN1LQ496H8 165 aa19.94■□□□□ 0.78
PTPN4-208ENST00000460289 DNM1P46Q6ZS02 220 aa19.94■□□□□ 0.78
PTPN4-208ENST00000460289 MBOAT2Q6ZWT7 520 aa19.94■□□□□ 0.78
PTPN4-208ENST00000460289 MYPOPQ86VE0 399 aaPredicted RBP19.94■□□□□ 0.78
PTPN4-208ENST00000460289 MCHR2Q969V1 340 aa19.94■□□□□ 0.78
PTPN4-208ENST00000460289 SEPHS2Q99611 448 aa19.94■□□□□ 0.78
PTPN4-208ENST00000460289 TXNIPQ9H3M7 391 aa19.94■□□□□ 0.78
PTPN4-208ENST00000460289 NMNAT1Q9HAN9 279 aaPredicted RBP19.94■□□□□ 0.78
PTPN4-208ENST00000460289 TMEM38BQ9NVV0 291 aa19.94■□□□□ 0.78
PTPN4-208ENST00000460289 FBXO9Q9UK97 447 aaPredicted RBP19.94■□□□□ 0.78
PTPN4-208ENST00000460289 ZFHX3Q15911 3703 aa19.93■□□□□ 0.78
PTPN4-208ENST00000460289 A0A087WUU8 490 aa19.93■□□□□ 0.78
PTPN4-208ENST00000460289 EFCAB9A8MZ26 197 aa19.93■□□□□ 0.78
PTPN4-208ENST00000460289 MGRN1O60291 552 aa19.93■□□□□ 0.78
PTPN4-208ENST00000460289 TRMUO75648 421 aaKnown RBP19.93■□□□□ 0.78
PTPN4-208ENST00000460289 LY6G6DO95868 133 aa19.93■□□□□ 0.78
PTPN4-208ENST00000460289 OR4A8P0C604 315 aa19.93■□□□□ 0.78
PTPN4-208ENST00000460289 NR2C1P13056 603 aa19.93■□□□□ 0.78
PTPN4-208ENST00000460289 HSD17B1P14061 328 aa19.93■□□□□ 0.78
PTPN4-208ENST00000460289 MAKP20794 623 aa19.93■□□□□ 0.78
PTPN4-208ENST00000460289 FUT4P22083 530 aa19.93■□□□□ 0.78
PTPN4-208ENST00000460289 GIPRP48546 466 aa19.93■□□□□ 0.78
PTPN4-208ENST00000460289 SLC9A3P48764 834 aa19.93■□□□□ 0.78
PTPN4-208ENST00000460289 MNAT1P51948 309 aa19.93■□□□□ 0.78
PTPN4-208ENST00000460289 LSM11P83369 360 aaKnown RBP eCLIP19.93■□□□□ 0.78
PTPN4-208ENST00000460289 HGFACQ04756 655 aa19.93■□□□□ 0.78
PTPN4-208ENST00000460289 RUNX1T1Q06455 604 aa19.93■□□□□ 0.78
PTPN4-208ENST00000460289 SAMD4BQ5PRF9 694 aaKnown RBP19.93■□□□□ 0.78
PTPN4-208ENST00000460289 ARMC4Q5T2S8 1044 aa19.93■□□□□ 0.78
PTPN4-208ENST00000460289 VHLLQ6RSH7 139 aa19.93■□□□□ 0.78
PTPN4-208ENST00000460289 DPPA2Q7Z7J5 298 aa19.93■□□□□ 0.78
PTPN4-208ENST00000460289 OAFQ86UD1 273 aa19.93■□□□□ 0.78
PTPN4-208ENST00000460289 SKA3Q8IX90 412 aa19.93■□□□□ 0.78
PTPN4-208ENST00000460289 SYT14Q8NB59 555 aa19.93■□□□□ 0.78
PTPN4-208ENST00000460289 NOXO1Q8NFA2 376 aa19.93■□□□□ 0.78
PTPN4-208ENST00000460289 ZNF75AQ96N20 296 aa19.93■□□□□ 0.78
PTPN4-208ENST00000460289 ZNF347Q96SE7 839 aa19.93■□□□□ 0.78
PTPN4-208ENST00000460289 RHNO1Q9BSD3 238 aa19.93■□□□□ 0.78
PTPN4-208ENST00000460289 ZNF442Q9H7R0 627 aa19.93■□□□□ 0.78
PTPN4-208ENST00000460289 ARL8BQ9NVJ2 186 aa19.93■□□□□ 0.78
PTPN4-208ENST00000460289 ZNF224Q9NZL3 707 aa19.93■□□□□ 0.78
PTPN4-208ENST00000460289 SPEF1Q9Y4P9 236 aa19.93■□□□□ 0.78
PTPN4-208ENST00000460289 NF1P21359 2839 aa19.93■□□□□ 0.78
PTPN4-208ENST00000460289 ZNF14P17017 642 aaPredicted RBP19.92■□□□□ 0.78
PTPN4-208ENST00000460289 RHCEP18577 417 aa19.92■□□□□ 0.78
PTPN4-208ENST00000460289 EFNB3Q15768 340 aa19.92■□□□□ 0.78
PTPN4-208ENST00000460289 ADIPOQQ15848 244 aa19.92■□□□□ 0.78
PTPN4-208ENST00000460289 C16orf89Q6UX73 402 aa19.92■□□□□ 0.78
PTPN4-208ENST00000460289 RBM15BQ8NDT2 890 aaKnown RBP19.92■□□□□ 0.78
PTPN4-208ENST00000460289 OR51A7Q8NH64 312 aa19.92■□□□□ 0.78
PTPN4-208ENST00000460289 CCT8L2Q96SF2 557 aa19.92■□□□□ 0.78
PTPN4-208ENST00000460289 CDRT15Q96T59 188 aa19.92■□□□□ 0.78
PTPN4-208ENST00000460289 REG4Q9BYZ8 158 aa19.92■□□□□ 0.78
PTPN4-208ENST00000460289 MAGEL2Q9UJ55 1249 aa19.92■□□□□ 0.78
PTPN4-208ENST00000460289 NIPBLQ6KC79 2804 aaeCLIP19.92■□□□□ 0.78
PTPN4-208ENST00000460289 A0A1W2PRQ8 180 aa19.91■□□□□ 0.78
PTPN4-208ENST00000460289 RNF223E7ERA6 249 aa19.91■□□□□ 0.78
PTPN4-208ENST00000460289 H1F0P07305 194 aaKnown RBP19.91■□□□□ 0.78
PTPN4-208ENST00000460289 TCN1P20061 433 aaPredicted RBP19.91■□□□□ 0.78
PTPN4-208ENST00000460289 NPR2P20594 1047 aa19.91■□□□□ 0.78
PTPN4-208ENST00000460289 THBS4P35443 961 aa19.91■□□□□ 0.78
PTPN4-208ENST00000460289 ZNF133P52736 654 aaPredicted RBP19.91■□□□□ 0.78
PTPN4-208ENST00000460289 EFNA4P52798 201 aa19.91■□□□□ 0.78
PTPN4-208ENST00000460289 CTXN1P60606 82 aa19.91■□□□□ 0.78
PTPN4-208ENST00000460289 MXRA7P84157 204 aa19.91■□□□□ 0.78
PTPN4-208ENST00000460289 MYBPC1Q00872 1141 aa19.91■□□□□ 0.78
PTPN4-208ENST00000460289 DAG1Q14118 895 aa19.91■□□□□ 0.78
PTPN4-208ENST00000460289 DGCR6Q14129 220 aa19.91■□□□□ 0.78
PTPN4-208ENST00000460289 FXNQ16595 210 aa19.91■□□□□ 0.78
PTPN4-208ENST00000460289 SPATS1Q496A3 300 aa19.91■□□□□ 0.78
PTPN4-208ENST00000460289 TBPL2Q6SJ96 375 aa19.91■□□□□ 0.78
PTPN4-208ENST00000460289 CLEC2AQ6UVW9 174 aa19.91■□□□□ 0.78
PTPN4-208ENST00000460289 TMPRSS11FQ6ZWK6 438 aa19.91■□□□□ 0.78
PTPN4-208ENST00000460289 Q71RC1 249 aaPredicted RBP19.91■□□□□ 0.78
PTPN4-208ENST00000460289 TSEN54Q7Z6J9 526 aaKnown RBP19.91■□□□□ 0.78
PTPN4-208ENST00000460289 FAM156AQ8NDB6 213 aa19.91■□□□□ 0.78
PTPN4-208ENST00000460289 FNDC8Q8TC99 324 aa19.91■□□□□ 0.78
PTPN4-208ENST00000460289 MS4A3Q96HJ5 214 aa19.91■□□□□ 0.78
PTPN4-208ENST00000460289 TNFRSF13CQ96RJ3 184 aa19.91■□□□□ 0.78
PTPN4-208ENST00000460289 SMURF2Q9HAU4 748 aa19.91■□□□□ 0.78
PTPN4-208ENST00000460289 NOX3Q9HBY0 568 aa19.91■□□□□ 0.78
PTPN4-208ENST00000460289 NDUFAF4Q9P032 175 aa19.91■□□□□ 0.78
PTPN4-208ENST00000460289 CD300AQ9UGN4 299 aa19.91■□□□□ 0.78
PTPN4-208ENST00000460289 TMEM5Q9Y2B1 443 aa19.91■□□□□ 0.78
PTPN4-208ENST00000460289 TRAV27A0A087WT01 109 aa19.9■□□□□ 0.78
PTPN4-208ENST00000460289 F12P00748 615 aaPredicted RBP19.9■□□□□ 0.78
PTPN4-208ENST00000460289 IGHMP01871 453 aa19.9■□□□□ 0.78
PTPN4-208ENST00000460289 SERPINA5P05154 406 aa19.9■□□□□ 0.78
PTPN4-208ENST00000460289 ITGA2P17301 1181 aa19.9■□□□□ 0.78
PTPN4-208ENST00000460289 NR4A1P22736 598 aa19.9■□□□□ 0.78
PTPN4-208ENST00000460289 RPL27P61353 136 aaKnown RBP19.9■□□□□ 0.78
PTPN4-208ENST00000460289 KRT72Q14CN4 511 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms