RNA–Protein interactions for RNA: ENST00000460168.1

HERC4-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-207ENST00000460168 FOLR3P41439 243 aa9.43□□□□□ -0.9
HERC4-207ENST00000460168 ACAA2P42765 397 aaKnown RBP9.43□□□□□ -0.9
HERC4-207ENST00000460168 CCR4P51679 360 aa9.43□□□□□ -0.9
HERC4-207ENST00000460168 EIF3IQ13347 325 aaKnown RBP9.43□□□□□ -0.9
HERC4-207ENST00000460168 C3orf38Q5JPI3 329 aa9.43□□□□□ -0.9
HERC4-207ENST00000460168 C6orf141Q5SZD1 244 aa9.43□□□□□ -0.9
HERC4-207ENST00000460168 STPG1Q5TH74 334 aa9.43□□□□□ -0.9
HERC4-207ENST00000460168 SLC30A6Q6NXT4 461 aa9.43□□□□□ -0.9
HERC4-207ENST00000460168 ZNF613Q6PF04 617 aa9.43□□□□□ -0.9
HERC4-207ENST00000460168 MEX3DQ86XN8 651 aaKnown RBP9.43□□□□□ -0.9
HERC4-207ENST00000460168 RAB43Q86YS6 212 aa9.43□□□□□ -0.9
HERC4-207ENST00000460168 NRMQ8IXM6 262 aa9.43□□□□□ -0.9
HERC4-207ENST00000460168 NLGN4XQ8N0W4 816 aa9.43□□□□□ -0.9
HERC4-207ENST00000460168 LRRC18Q8N456 261 aa9.43□□□□□ -0.9
HERC4-207ENST00000460168 ZNF441Q8N8Z8 693 aa9.43□□□□□ -0.9
HERC4-207ENST00000460168 OR2Y1Q8NGV0 311 aa9.43□□□□□ -0.9
HERC4-207ENST00000460168 OIT3Q8WWZ8 545 aa9.43□□□□□ -0.9
HERC4-207ENST00000460168 C22orf15Q8WYQ4 148 aa9.43□□□□□ -0.9
HERC4-207ENST00000460168 FAM46AQ96IP4 442 aaKnown RBP9.43□□□□□ -0.9
HERC4-207ENST00000460168 MEGF10Q96KG7 1140 aa9.43□□□□□ -0.9
HERC4-207ENST00000460168 DDA1Q9BW61 102 aa9.43□□□□□ -0.9
HERC4-207ENST00000460168 FAM212BQ9NTI7 297 aaPredicted RBP9.43□□□□□ -0.9
HERC4-207ENST00000460168 PAK1IP1Q9NWT1 392 aaPredicted RBP9.43□□□□□ -0.9
HERC4-207ENST00000460168 CNIH4Q9P003 139 aa9.43□□□□□ -0.9
HERC4-207ENST00000460168 RPS6KB2Q9UBS0 482 aa9.43□□□□□ -0.9
HERC4-207ENST00000460168 PPIEQ9UNP9 301 aaKnown RBP9.43□□□□□ -0.9
HERC4-207ENST00000460168 STARD10Q9Y365 291 aa9.43□□□□□ -0.9
HERC4-207ENST00000460168 PUS1Q9Y606 427 aaKnown RBP eCLIP9.43□□□□□ -0.9
HERC4-207ENST00000460168 A0A0B4J293 547 aa9.42□□□□□ -0.9
HERC4-207ENST00000460168 KDM4EB2RXH2 506 aaPredicted RBP9.42□□□□□ -0.9
HERC4-207ENST00000460168 H7C1Q1 480 aa9.42□□□□□ -0.9
HERC4-207ENST00000460168 PRKYO43930 277 aa9.42□□□□□ -0.9
HERC4-207ENST00000460168 SELENOFO60613 162 aa9.42□□□□□ -0.9
HERC4-207ENST00000460168 RPP14O95059 124 aaKnown RBP9.42□□□□□ -0.9
HERC4-207ENST00000460168 UMODP07911 640 aa9.42□□□□□ -0.9
HERC4-207ENST00000460168 GSTM3P21266 225 aa9.42□□□□□ -0.9
HERC4-207ENST00000460168 LCN1P31025 176 aa9.42□□□□□ -0.9
HERC4-207ENST00000460168 SDHAP31040 664 aa9.42□□□□□ -0.9
HERC4-207ENST00000460168 PNLIPRP2P54317 469 aa9.42□□□□□ -0.9
HERC4-207ENST00000460168 PRRX1P54821 245 aa9.42□□□□□ -0.9
HERC4-207ENST00000460168 CDC42P60953 191 aa9.42□□□□□ -0.9
HERC4-207ENST00000460168 RBX1P62877 108 aa9.42□□□□□ -0.9
HERC4-207ENST00000460168 CDK5R2Q13319 367 aa9.42□□□□□ -0.9
HERC4-207ENST00000460168 CD226Q15762 336 aa9.42□□□□□ -0.9
HERC4-207ENST00000460168 ALG10BQ5I7T1 473 aa9.42□□□□□ -0.9
HERC4-207ENST00000460168 RBM48Q5RL73 367 aaKnown RBP9.42□□□□□ -0.9
HERC4-207ENST00000460168 TMEM236Q5W0B7 351 aa9.42□□□□□ -0.9
HERC4-207ENST00000460168 KLHL24Q6TFL4 600 aa9.42□□□□□ -0.9
HERC4-207ENST00000460168 C6orf15Q6UXA7 325 aaPredicted RBP9.42□□□□□ -0.9
HERC4-207ENST00000460168 C16orf47Q6ZP98 133 aaPredicted RBP9.42□□□□□ -0.9
HERC4-207ENST00000460168 MBOAT2Q6ZWT7 520 aa9.42□□□□□ -0.9
HERC4-207ENST00000460168 CCDC71Q8IV32 467 aaPredicted RBP9.42□□□□□ -0.9
HERC4-207ENST00000460168 BPIFB6Q8NFQ5 453 aa9.42□□□□□ -0.9
HERC4-207ENST00000460168 OR5L2Q8NGL0 311 aa9.42□□□□□ -0.9
HERC4-207ENST00000460168 NUBPLQ8TB37 319 aa9.42□□□□□ -0.9
HERC4-207ENST00000460168 TBL1XR1Q9BZK7 514 aa9.42□□□□□ -0.9
HERC4-207ENST00000460168 MIXL1Q9H2W2 232 aa9.42□□□□□ -0.9
HERC4-207ENST00000460168 DSN1Q9H410 356 aa9.42□□□□□ -0.9
HERC4-207ENST00000460168 ZBTB20Q9HC78 741 aaPredicted RBP9.42□□□□□ -0.9
HERC4-207ENST00000460168 AASSQ9UDR5 926 aa9.42□□□□□ -0.9
HERC4-207ENST00000460168 SSR3Q9UNL2 185 aa9.42□□□□□ -0.9
HERC4-207ENST00000460168 A0A0B4J2E0 115 aa9.41□□□□□ -0.9
HERC4-207ENST00000460168 A0A1B0GWA3 101 aa9.41□□□□□ -0.9
HERC4-207ENST00000460168 A0A1B0GX12 115 aa9.41□□□□□ -0.9
HERC4-207ENST00000460168 WWP2O00308 870 aa9.41□□□□□ -0.9
HERC4-207ENST00000460168 SLC1A7O00341 560 aa9.41□□□□□ -0.9
HERC4-207ENST00000460168 ZNF264O43296 627 aa9.41□□□□□ -0.9
HERC4-207ENST00000460168 CHP2O43745 196 aa9.41□□□□□ -0.9
HERC4-207ENST00000460168 TCN2P20062 427 aa9.41□□□□□ -0.9
HERC4-207ENST00000460168 CRHBPP24387 322 aa9.41□□□□□ -0.9
HERC4-207ENST00000460168 GPR4P46093 362 aa9.41□□□□□ -0.9
HERC4-207ENST00000460168 HLCSP50747 726 aa9.41□□□□□ -0.9
HERC4-207ENST00000460168 NUDT6P53370 316 aa9.41□□□□□ -0.9
HERC4-207ENST00000460168 MAD2L1BPQ15013 274 aaPredicted RBP9.41□□□□□ -0.9
HERC4-207ENST00000460168 ETFRF1Q6IPR1 90 aa9.41□□□□□ -0.9
HERC4-207ENST00000460168 APOOLQ6UXV4 268 aa9.41□□□□□ -0.9
HERC4-207ENST00000460168 CD300LDQ6UXZ3 194 aa9.41□□□□□ -0.9
HERC4-207ENST00000460168 PRSS48Q7RTY5 328 aa9.41□□□□□ -0.9
HERC4-207ENST00000460168 PRICKLE2Q7Z3G6 844 aa9.41□□□□□ -0.9
HERC4-207ENST00000460168 PIP4P1Q86T03 277 aa9.41□□□□□ -0.9
HERC4-207ENST00000460168 ZNF440Q8IYI8 595 aa9.41□□□□□ -0.9
HERC4-207ENST00000460168 DEFB124Q8NES8 71 aa9.41□□□□□ -0.9
HERC4-207ENST00000460168 OR5M3Q8NGP4 307 aa9.41□□□□□ -0.9
HERC4-207ENST00000460168 GNPDA2Q8TDQ7 276 aa9.41□□□□□ -0.9
HERC4-207ENST00000460168 TMEM239Q8WW34 195 aa9.41□□□□□ -0.9
HERC4-207ENST00000460168 UBE2FQ969M7 185 aa9.41□□□□□ -0.9
HERC4-207ENST00000460168 SPACA9Q96E40 222 aaPredicted RBP9.41□□□□□ -0.9
HERC4-207ENST00000460168 NARS2Q96I59 477 aaKnown RBP9.41□□□□□ -0.9
HERC4-207ENST00000460168 GPA33Q99795 319 aa9.41□□□□□ -0.9
HERC4-207ENST00000460168 PRSS27Q9BQR3 290 aa9.41□□□□□ -0.9
HERC4-207ENST00000460168 REG4Q9BYZ8 158 aa9.41□□□□□ -0.9
HERC4-207ENST00000460168 MS4A7Q9GZW8 240 aaPredicted RBP9.41□□□□□ -0.9
HERC4-207ENST00000460168 DNTTIP1Q9H147 329 aa9.41□□□□□ -0.9
HERC4-207ENST00000460168 KNTC1P50748 2209 aa9.41□□□□□ -0.9
HERC4-207ENST00000460168 FREM2Q5SZK8 3169 aa9.41□□□□□ -0.9
HERC4-207ENST00000460168 OR2AT4A6NND4 320 aa9.41□□□□□ -0.9
HERC4-207ENST00000460168 ZAR1LA6NP61 321 aa9.41□□□□□ -0.9
HERC4-207ENST00000460168 C9orf172C9J069 976 aa9.41□□□□□ -0.9
HERC4-207ENST00000460168 E9PQ18 207 aa9.41□□□□□ -0.9
HERC4-207ENST00000460168 UBE2CO00762 179 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms