RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 TPK1Q9H3S4 243 aa19.61■□□□□ 0.73
PTPN4-207ENST00000460162 MS4A5Q9H3V2 200 aa19.61■□□□□ 0.73
PTPN4-207ENST00000460162 MEPEQ9NQ76 525 aaPredicted RBP19.61■□□□□ 0.73
PTPN4-207ENST00000460162 BAG5Q9UL15 447 aa19.61■□□□□ 0.73
PTPN4-207ENST00000460162 BBIP1A8MTZ0 92 aa19.6■□□□□ 0.73
PTPN4-207ENST00000460162 DHHO43323 396 aa19.6■□□□□ 0.73
PTPN4-207ENST00000460162 BCL10O95999 233 aa19.6■□□□□ 0.73
PTPN4-207ENST00000460162 NPPAP01160 153 aa19.6■□□□□ 0.73
PTPN4-207ENST00000460162 IGF2P01344 180 aa19.6■□□□□ 0.73
PTPN4-207ENST00000460162 SERPINA5P05154 406 aa19.6■□□□□ 0.73
PTPN4-207ENST00000460162 RBM34P42696 430 aaKnown RBP19.6■□□□□ 0.73
PTPN4-207ENST00000460162 RIN1Q13671 783 aa19.6■□□□□ 0.73
PTPN4-207ENST00000460162 RAB39AQ14964 217 aa19.6■□□□□ 0.73
PTPN4-207ENST00000460162 ERICH5Q6P6B1 374 aa19.6■□□□□ 0.73
PTPN4-207ENST00000460162 HDDC2Q7Z4H3 204 aa19.6■□□□□ 0.73
PTPN4-207ENST00000460162 CARM1Q86X55 608 aa19.6■□□□□ 0.73
PTPN4-207ENST00000460162 ZNF584Q8IVC4 421 aa19.6■□□□□ 0.73
PTPN4-207ENST00000460162 NOXO1Q8NFA2 376 aa19.6■□□□□ 0.73
PTPN4-207ENST00000460162 LRRC58Q96CX6 371 aa19.6■□□□□ 0.73
PTPN4-207ENST00000460162 SH3GLB1Q9Y371 365 aa19.6■□□□□ 0.73
PTPN4-207ENST00000460162 LRP5LA4QPB2 252 aa19.59■□□□□ 0.73
PTPN4-207ENST00000460162 CENPBD1B2RD01 187 aa19.59■□□□□ 0.73
PTPN4-207ENST00000460162 LILRA1O75019 489 aa19.59■□□□□ 0.73
PTPN4-207ENST00000460162 TGFAP01135 160 aa19.59■□□□□ 0.73
PTPN4-207ENST00000460162 MT-ND1P03886 318 aa19.59■□□□□ 0.73
PTPN4-207ENST00000460162 TROVE2P10155 538 aaKnown RBP eCLIP19.59■□□□□ 0.73
PTPN4-207ENST00000460162 TAS2R41P59536 307 aa19.59■□□□□ 0.73
PTPN4-207ENST00000460162 REP15Q6BDI9 236 aa19.59■□□□□ 0.73
PTPN4-207ENST00000460162 LRFN4Q6PJG9 635 aa19.59■□□□□ 0.73
PTPN4-207ENST00000460162 ECSITQ9BQ95 431 aa19.59■□□□□ 0.73
PTPN4-207ENST00000460162 SYT3Q9BQG1 590 aa19.59■□□□□ 0.73
PTPN4-207ENST00000460162 SOX7Q9BT81 388 aa19.59■□□□□ 0.73
PTPN4-207ENST00000460162 C1orf198Q9H425 327 aa19.59■□□□□ 0.73
PTPN4-207ENST00000460162 REV1Q9UBZ9 1251 aa19.59■□□□□ 0.73
PTPN4-207ENST00000460162 A0A1W2PRG6 482 aa19.58■□□□□ 0.72
PTPN4-207ENST00000460162 MRASO14807 208 aa19.58■□□□□ 0.72
PTPN4-207ENST00000460162 OR5F1O95221 314 aa19.58■□□□□ 0.72
PTPN4-207ENST00000460162 PATE4P0C8F1 98 aa19.58■□□□□ 0.72
PTPN4-207ENST00000460162 APEX1P27695 318 aaKnown RBP19.58■□□□□ 0.72
PTPN4-207ENST00000460162 CLRN1P58418 232 aa19.58■□□□□ 0.72
PTPN4-207ENST00000460162 RPL18Q07020 188 aaKnown RBP19.58■□□□□ 0.72
PTPN4-207ENST00000460162 MAPRE2Q15555 327 aa19.58■□□□□ 0.72
PTPN4-207ENST00000460162 HIST3H3Q16695 136 aa19.58■□□□□ 0.72
PTPN4-207ENST00000460162 MMEL1Q495T6 779 aa19.58■□□□□ 0.72
PTPN4-207ENST00000460162 UGT2A3Q6UWM9 527 aa19.58■□□□□ 0.72
PTPN4-207ENST00000460162 IL17RELQ6ZVW7 336 aa19.58■□□□□ 0.72
PTPN4-207ENST00000460162 FGFBP3Q8TAT2 258 aa19.58■□□□□ 0.72
PTPN4-207ENST00000460162 SNX18Q96RF0 628 aa19.58■□□□□ 0.72
PTPN4-207ENST00000460162 SEPHS2Q99611 448 aa19.58■□□□□ 0.72
PTPN4-207ENST00000460162 STX18Q9P2W9 335 aaKnown RBP19.58■□□□□ 0.72
PTPN4-207ENST00000460162 SLC22A23A1A5C7 686 aa19.57■□□□□ 0.72
PTPN4-207ENST00000460162 MCIDASD6RGH6 385 aa19.57■□□□□ 0.72
PTPN4-207ENST00000460162 BLOC1S5-TXNDC5H3BN57 136 aa19.57■□□□□ 0.72
PTPN4-207ENST00000460162 OR7A10O76100 309 aa19.57■□□□□ 0.72
PTPN4-207ENST00000460162 IFNA14P01570 189 aa19.57■□□□□ 0.72
PTPN4-207ENST00000460162 QDPRP09417 244 aa19.57■□□□□ 0.72
PTPN4-207ENST00000460162 DAP3P51398 398 aaKnown RBP19.57■□□□□ 0.72
PTPN4-207ENST00000460162 ZNF84P51523 738 aa19.57■□□□□ 0.72
PTPN4-207ENST00000460162 UGT2B15P54855 530 aa19.57■□□□□ 0.72
PTPN4-207ENST00000460162 SLC36A2Q495M3 483 aa19.57■□□□□ 0.72
PTPN4-207ENST00000460162 TMEM53Q6P2H8 277 aa19.57■□□□□ 0.72
PTPN4-207ENST00000460162 DEF8Q6ZN54 512 aa19.57■□□□□ 0.72
PTPN4-207ENST00000460162 SLC30A7Q8NEW0 376 aa19.57■□□□□ 0.72
PTPN4-207ENST00000460162 OR4K5Q8NGD3 323 aa19.57■□□□□ 0.72
PTPN4-207ENST00000460162 ASB10Q8WXI3 467 aa19.57■□□□□ 0.72
PTPN4-207ENST00000460162 SH3GL3Q99963 347 aa19.57■□□□□ 0.72
PTPN4-207ENST00000460162 MRPL13Q9BYD1 178 aaKnown RBP19.57■□□□□ 0.72
PTPN4-207ENST00000460162 ZNF346Q9UL40 294 aaKnown RBP19.57■□□□□ 0.72
PTPN4-207ENST00000460162 SNAP29O95721 258 aa19.56■□□□□ 0.72
PTPN4-207ENST00000460162 THRBP10828 461 aa19.56■□□□□ 0.72
PTPN4-207ENST00000460162 TNFRSF1BP20333 461 aa19.56■□□□□ 0.72
PTPN4-207ENST00000460162 IL2RGP31785 369 aa19.56■□□□□ 0.72
PTPN4-207ENST00000460162 ALDH3B1P43353 468 aa19.56■□□□□ 0.72
PTPN4-207ENST00000460162 KLF10Q13118 480 aa19.56■□□□□ 0.72
PTPN4-207ENST00000460162 NKAIN4Q8IVV8 208 aa19.56■□□□□ 0.72
PTPN4-207ENST00000460162 PFN4Q8NHR9 129 aa19.56■□□□□ 0.72
PTPN4-207ENST00000460162 TMEM255BQ8WV15 326 aa19.56■□□□□ 0.72
PTPN4-207ENST00000460162 TMEM239Q8WW34 195 aa19.56■□□□□ 0.72
PTPN4-207ENST00000460162 LIPHQ8WWY8 451 aa19.56■□□□□ 0.72
PTPN4-207ENST00000460162 MCHR2Q969V1 340 aa19.56■□□□□ 0.72
PTPN4-207ENST00000460162 SGTBQ96EQ0 304 aa19.56■□□□□ 0.72
PTPN4-207ENST00000460162 A0A1W2PPW3 197 aa19.55■□□□□ 0.72
PTPN4-207ENST00000460162 NPIPB13A6NJU9 1138 aa19.55■□□□□ 0.72
PTPN4-207ENST00000460162 FAM220BPB1ANY3 271 aa19.55■□□□□ 0.72
PTPN4-207ENST00000460162 NPIPB4C9JG80 1138 aa19.55■□□□□ 0.72
PTPN4-207ENST00000460162 MGRN1O60291 552 aa19.55■□□□□ 0.72
PTPN4-207ENST00000460162 SASH3O75995 380 aa19.55■□□□□ 0.72
PTPN4-207ENST00000460162 PTHP01270 115 aa19.55■□□□□ 0.72
PTPN4-207ENST00000460162 F13BP05160 661 aa19.55■□□□□ 0.72
PTPN4-207ENST00000460162 FUT1P19526 365 aa19.55■□□□□ 0.72
PTPN4-207ENST00000460162 ACHEP22303 614 aa19.55■□□□□ 0.72
PTPN4-207ENST00000460162 ZNF133P52736 654 aaPredicted RBP19.55■□□□□ 0.72
PTPN4-207ENST00000460162 ARFIP2P53365 341 aa19.55■□□□□ 0.72
PTPN4-207ENST00000460162 CDH15P55291 814 aa19.55■□□□□ 0.72
PTPN4-207ENST00000460162 TRIP10Q15642 601 aa19.55■□□□□ 0.72
PTPN4-207ENST00000460162 CR1LQ2VPA4 569 aa19.55■□□□□ 0.72
PTPN4-207ENST00000460162 ELFN2Q5R3F8 820 aa19.55■□□□□ 0.72
PTPN4-207ENST00000460162 RGS7BPQ6MZT1 257 aaPredicted RBP19.55■□□□□ 0.72
PTPN4-207ENST00000460162 SLC16A14Q7RTX9 510 aa19.55■□□□□ 0.72
PTPN4-207ENST00000460162 LINC01356Q8N9X3 169 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms