RNA–Protein interactions for RNA: ENST00000460112.3

SHROOM4-203, Transcript of shroom family member 4, humanhuman

TSL 5 BASIC

Gene SHROOM4, Length 8,919 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-203ENST00000460112 USP36Q9P275 1121 aaKnown RBP8.24□□□□□ -1.09
SHROOM4-203ENST00000460112 WRAP73Q9P2S5 460 aaPredicted RBP8.24□□□□□ -1.09
SHROOM4-203ENST00000460112 A0A0A6YYC8 382 aaPredicted RBP8.23□□□□□ -1.09
SHROOM4-203ENST00000460112 SLC5A10A0PJK1 596 aa8.23□□□□□ -1.09
SHROOM4-203ENST00000460112 PMS2P1A4D2B8 440 aa8.23□□□□□ -1.09
SHROOM4-203ENST00000460112 I3L1I5 382 aaPredicted RBP8.23□□□□□ -1.09
SHROOM4-203ENST00000460112 HPGDSO60760 199 aa8.23□□□□□ -1.09
SHROOM4-203ENST00000460112 HOXD13P35453 343 aa8.23□□□□□ -1.09
SHROOM4-203ENST00000460112 SPCS2Q15005 226 aa8.23□□□□□ -1.09
SHROOM4-203ENST00000460112 ZNF296Q8WUU4 475 aaPredicted RBP8.23□□□□□ -1.09
SHROOM4-203ENST00000460112 JAM3Q9BX67 310 aa8.23□□□□□ -1.09
SHROOM4-203ENST00000460112 SMIM3Q9BZL3 60 aa8.23□□□□□ -1.09
SHROOM4-203ENST00000460112 HRH4Q9H3N8 390 aa8.23□□□□□ -1.09
SHROOM4-203ENST00000460112 LRIT1Q9P2V4 623 aa8.23□□□□□ -1.09
SHROOM4-203ENST00000460112 AQP9O43315 295 aa8.23□□□□□ -1.09
SHROOM4-203ENST00000460112 SNAI1O95863 264 aaPredicted RBP8.23□□□□□ -1.09
SHROOM4-203ENST00000460112 SCG5P05408 212 aa8.23□□□□□ -1.09
SHROOM4-203ENST00000460112 ARAFP10398 606 aa8.23□□□□□ -1.09
SHROOM4-203ENST00000460112 IVDP26440 423 aa8.23□□□□□ -1.09
SHROOM4-203ENST00000460112 GJA5P36382 358 aa8.23□□□□□ -1.09
SHROOM4-203ENST00000460112 PODNL1Q6PEZ8 512 aa8.23□□□□□ -1.09
SHROOM4-203ENST00000460112 APOOLQ6UXV4 268 aa8.23□□□□□ -1.09
SHROOM4-203ENST00000460112 ISCA2Q86U28 154 aa8.23□□□□□ -1.09
SHROOM4-203ENST00000460112 NAXDQ8IW45 347 aa8.23□□□□□ -1.09
SHROOM4-203ENST00000460112 CMTM4Q8IZR5 234 aa8.23□□□□□ -1.09
SHROOM4-203ENST00000460112 NAGSQ8N159 534 aa8.23□□□□□ -1.09
SHROOM4-203ENST00000460112 H1FXQ92522 213 aaKnown RBP8.23□□□□□ -1.09
SHROOM4-203ENST00000460112 OR7D2Q96RA2 312 aa8.23□□□□□ -1.09
SHROOM4-203ENST00000460112 GAR1Q9NY12 217 aaKnown RBP8.23□□□□□ -1.09
SHROOM4-203ENST00000460112 MYEF2Q9P2K5 600 aaKnown RBP8.23□□□□□ -1.09
SHROOM4-203ENST00000460112 RAB22AQ9UL26 194 aa8.23□□□□□ -1.09
SHROOM4-203ENST00000460112 EXO1Q9UQ84 846 aaKnown RBP8.23□□□□□ -1.09
SHROOM4-203ENST00000460112 ABHD16AO95870 558 aa8.23□□□□□ -1.09
SHROOM4-203ENST00000460112 GIFP27352 417 aa8.23□□□□□ -1.09
SHROOM4-203ENST00000460112 ARR3P36575 388 aa8.23□□□□□ -1.09
SHROOM4-203ENST00000460112 AGFG1P52594 562 aaKnown RBP8.23□□□□□ -1.09
SHROOM4-203ENST00000460112 SNRPGP62308 76 aaKnown RBP8.23□□□□□ -1.09
SHROOM4-203ENST00000460112 SLC7A9P82251 487 aa8.23□□□□□ -1.09
SHROOM4-203ENST00000460112 TMEM176BQ3YBM2 270 aaPredicted RBP8.23□□□□□ -1.09
SHROOM4-203ENST00000460112 ZNF626Q68DY1 528 aa8.23□□□□□ -1.09
SHROOM4-203ENST00000460112 LCN10Q6JVE6 187 aa8.23□□□□□ -1.09
SHROOM4-203ENST00000460112 SPRED1Q7Z699 444 aa8.23□□□□□ -1.09
SHROOM4-203ENST00000460112 MFSD6LQ8IWD5 586 aa8.23□□□□□ -1.09
SHROOM4-203ENST00000460112 OR9Q2Q8NGE9 314 aa8.23□□□□□ -1.09
SHROOM4-203ENST00000460112 NDUFA6P56556 154 aa8.23□□□□□ -1.09
SHROOM4-203ENST00000460112 SH3BP2P78314 561 aa8.23□□□□□ -1.09
SHROOM4-203ENST00000460112 GABREP78334 506 aa8.23□□□□□ -1.09
SHROOM4-203ENST00000460112 SLC35A2P78381 396 aa8.23□□□□□ -1.09
SHROOM4-203ENST00000460112 TPBGQ13641 420 aa8.23□□□□□ -1.09
SHROOM4-203ENST00000460112 ERVMER34-1Q9H9K5 563 aa8.23□□□□□ -1.09
SHROOM4-203ENST00000460112 RANGRFQ9HD47 186 aaPredicted RBP8.23□□□□□ -1.09
SHROOM4-203ENST00000460112 MRPS28Q9Y2Q9 187 aaKnown RBP8.23□□□□□ -1.09
SHROOM4-203ENST00000460112 PATJQ8NI35 1801 aa8.23□□□□□ -1.09
SHROOM4-203ENST00000460112 GFRA2O00451 464 aa8.23□□□□□ -1.09
SHROOM4-203ENST00000460112 F10P00742 488 aa8.23□□□□□ -1.09
SHROOM4-203ENST00000460112 CSF3P09919 207 aa8.23□□□□□ -1.09
SHROOM4-203ENST00000460112 MAKP20794 623 aa8.23□□□□□ -1.09
SHROOM4-203ENST00000460112 ILKQ13418 452 aa8.23□□□□□ -1.09
SHROOM4-203ENST00000460112 DPY19L2P2Q6ZN68 376 aa8.23□□□□□ -1.09
SHROOM4-203ENST00000460112 NLRC3Q7RTR2 1065 aa8.23□□□□□ -1.09
SHROOM4-203ENST00000460112 IGDCC3Q8IVU1 814 aa8.23□□□□□ -1.09
SHROOM4-203ENST00000460112 GJC3Q8NFK1 279 aa8.23□□□□□ -1.09
SHROOM4-203ENST00000460112 LINC01599Q8WXQ3 324 aa8.23□□□□□ -1.09
SHROOM4-203ENST00000460112 ATOH1Q92858 354 aaPredicted RBP8.23□□□□□ -1.09
SHROOM4-203ENST00000460112 SLC39A13Q96H72 371 aa8.23□□□□□ -1.09
SHROOM4-203ENST00000460112 LIN7CQ9NUP9 197 aaKnown RBP8.23□□□□□ -1.09
SHROOM4-203ENST00000460112 POLDIP2Q9Y2S7 368 aa8.23□□□□□ -1.09
SHROOM4-203ENST00000460112 PIPP12273 146 aaPredicted RBP8.23□□□□□ -1.09
SHROOM4-203ENST00000460112 ERVPABLB-1P60509 514 aa8.23□□□□□ -1.09
SHROOM4-203ENST00000460112 PM20D1Q6GTS8 502 aa8.23□□□□□ -1.09
SHROOM4-203ENST00000460112 CD163Q86VB7 1156 aa8.23□□□□□ -1.09
SHROOM4-203ENST00000460112 PRSS35Q8N3Z0 413 aa8.23□□□□□ -1.09
SHROOM4-203ENST00000460112 APIPQ96GX9 242 aa8.23□□□□□ -1.09
SHROOM4-203ENST00000460112 CMTM3Q96MX0 182 aa8.23□□□□□ -1.09
SHROOM4-203ENST00000460112 INPP5KQ9BT40 448 aa8.23□□□□□ -1.09
SHROOM4-203ENST00000460112 ATP13A2Q9NQ11 1180 aa8.23□□□□□ -1.09
SHROOM4-203ENST00000460112 PUS1Q9Y606 427 aaKnown RBP eCLIP8.23□□□□□ -1.09
SHROOM4-203ENST00000460112 ACTL7AQ9Y615 435 aa8.23□□□□□ -1.09
SHROOM4-203ENST00000460112 CSNK1G3Q9Y6M4 447 aa8.23□□□□□ -1.09
SHROOM4-203ENST00000460112 SDK2Q58EX2 2172 aa8.23□□□□□ -1.09
SHROOM4-203ENST00000460112 TRAV27A0A087WT01 109 aa8.23□□□□□ -1.09
SHROOM4-203ENST00000460112 ANKUB1A6NFN9 424 aa8.23□□□□□ -1.09
SHROOM4-203ENST00000460112 PMS2P2O95744 297 aa8.23□□□□□ -1.09
SHROOM4-203ENST00000460112 HPNP05981 417 aa8.23□□□□□ -1.09
SHROOM4-203ENST00000460112 F7P08709 466 aaPredicted RBP8.23□□□□□ -1.09
SHROOM4-203ENST00000460112 OR1D4P47884 311 aa8.23□□□□□ -1.09
SHROOM4-203ENST00000460112 CYB561P49447 251 aa8.23□□□□□ -1.09
SHROOM4-203ENST00000460112 PIN1Q13526 163 aaPredicted RBP8.23□□□□□ -1.09
SHROOM4-203ENST00000460112 CEACAM7Q14002 265 aa8.23□□□□□ -1.09
SHROOM4-203ENST00000460112 PLK5Q496M5 336 aa8.23□□□□□ -1.09
SHROOM4-203ENST00000460112 ZNF628Q5EBL2 1059 aa8.23□□□□□ -1.09
SHROOM4-203ENST00000460112 FAM122BQ7Z309 247 aa8.23□□□□□ -1.09
SHROOM4-203ENST00000460112 TSEN54Q7Z6J9 526 aaKnown RBP8.23□□□□□ -1.09
SHROOM4-203ENST00000460112 SECTM1Q8WVN6 248 aa8.23□□□□□ -1.09
SHROOM4-203ENST00000460112 BOCQ9BWV1 1114 aa8.23□□□□□ -1.09
SHROOM4-203ENST00000460112 OR52A1Q9UKL2 312 aa8.23□□□□□ -1.09
SHROOM4-203ENST00000460112 LOC100289279A0A1B0GTE1 492 aa8.22□□□□□ -1.09
SHROOM4-203ENST00000460112 BTNL8Q6UX41 500 aa8.22□□□□□ -1.09
SHROOM4-203ENST00000460112 OVCH1Q7RTY7 1134 aa8.22□□□□□ -1.09
SHROOM4-203ENST00000460112 OR2AE1Q8NHA4 323 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms