RNA–Protein interactions for RNA: ENST00000459904.1

LMNA-209, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 916 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-209ENST00000459904 A0A0A6YYJ9 748 aa12.85□□□□□ -0.35
LMNA-209ENST00000459904 A0A0B4J2E0 115 aa12.85□□□□□ -0.35
LMNA-209ENST00000459904 A0A0G2JND7 137 aa12.85□□□□□ -0.35
LMNA-209ENST00000459904 A0A1B0GX12 115 aa12.85□□□□□ -0.35
LMNA-209ENST00000459904 KPNA4O00629 521 aaPredicted RBP12.85□□□□□ -0.35
LMNA-209ENST00000459904 UBDO15205 165 aa12.85□□□□□ -0.35
LMNA-209ENST00000459904 OPN1SWP03999 348 aa12.85□□□□□ -0.35
LMNA-209ENST00000459904 LCKP06239 509 aa12.85□□□□□ -0.35
LMNA-209ENST00000459904 PCMT1P22061 227 aa12.85□□□□□ -0.35
LMNA-209ENST00000459904 PRKAR1BP31321 381 aa12.85□□□□□ -0.35
LMNA-209ENST00000459904 RGS8P57771 180 aaPredicted RBP12.85□□□□□ -0.35
LMNA-209ENST00000459904 HILS1P60008 231 aa12.85□□□□□ -0.35
LMNA-209ENST00000459904 CDK6Q00534 326 aa12.85□□□□□ -0.35
LMNA-209ENST00000459904 RGS7BPQ6MZT1 257 aaPredicted RBP12.85□□□□□ -0.35
LMNA-209ENST00000459904 ULK3Q6PHR2 472 aa12.85□□□□□ -0.35
LMNA-209ENST00000459904 LRFN4Q6PJG9 635 aa12.85□□□□□ -0.35
LMNA-209ENST00000459904 DHRS4L2Q6PKH6 230 aa12.85□□□□□ -0.35
LMNA-209ENST00000459904 ZNF627Q7L945 461 aa12.85□□□□□ -0.35
LMNA-209ENST00000459904 TSPYL5Q86VY4 417 aaPredicted RBP12.85□□□□□ -0.35
LMNA-209ENST00000459904 RBM45Q8IUH3 476 aaKnown RBP12.85□□□□□ -0.35
LMNA-209ENST00000459904 ZDHHC22Q8N966 263 aa12.85□□□□□ -0.35
LMNA-209ENST00000459904 ADPRHL1Q8NDY3 354 aa12.85□□□□□ -0.35
LMNA-209ENST00000459904 TMEM54Q969K7 222 aa12.85□□□□□ -0.35
LMNA-209ENST00000459904 TMEM120AQ9BXJ8 343 aa12.85□□□□□ -0.35
LMNA-209ENST00000459904 NSRP1Q9H0G5 558 aaKnown RBP12.85□□□□□ -0.35
LMNA-209ENST00000459904 RNF121Q9H920 327 aa12.85□□□□□ -0.35
LMNA-209ENST00000459904 C12orf10Q9HB07 376 aa12.85□□□□□ -0.35
LMNA-209ENST00000459904 PPIAL4AQ9Y536 164 aa12.85□□□□□ -0.35
LMNA-209ENST00000459904 CMYA5Q8N3K9 4069 aa12.84□□□□□ -0.35
LMNA-209ENST00000459904 C17orf100A8MU93 164 aa12.84□□□□□ -0.35
LMNA-209ENST00000459904 TPD52L2O43399 206 aaKnown RBP12.84□□□□□ -0.35
LMNA-209ENST00000459904 DEAF1O75398 565 aaPredicted RBP12.84□□□□□ -0.35
LMNA-209ENST00000459904 UBL3O95164 117 aa12.84□□□□□ -0.35
LMNA-209ENST00000459904 CH25HO95992 272 aa12.84□□□□□ -0.35
LMNA-209ENST00000459904 THY1P04216 161 aa12.84□□□□□ -0.35
LMNA-209ENST00000459904 SERPINA5P05154 406 aa12.84□□□□□ -0.35
LMNA-209ENST00000459904 BMP2P12643 396 aa12.84□□□□□ -0.35
LMNA-209ENST00000459904 MAKP20794 623 aa12.84□□□□□ -0.35
LMNA-209ENST00000459904 TMEM33P57088 247 aa12.84□□□□□ -0.35
LMNA-209ENST00000459904 NCALDP61601 193 aa12.84□□□□□ -0.35
LMNA-209ENST00000459904 AWAT1Q58HT5 328 aa12.84□□□□□ -0.35
LMNA-209ENST00000459904 SPATA46Q5T0L3 261 aa12.84□□□□□ -0.35
LMNA-209ENST00000459904 UGT2A3Q6UWM9 527 aa12.84□□□□□ -0.35
LMNA-209ENST00000459904 USP51Q70EK9 711 aa12.84□□□□□ -0.35
LMNA-209ENST00000459904 SLC35D2Q76EJ3 337 aa12.84□□□□□ -0.35
LMNA-209ENST00000459904 NET1Q7Z628 596 aaPredicted RBP12.84□□□□□ -0.35
LMNA-209ENST00000459904 FUNDC1Q8IVP5 155 aa12.84□□□□□ -0.35
LMNA-209ENST00000459904 LRRC18Q8N456 261 aa12.84□□□□□ -0.35
LMNA-209ENST00000459904 SLC22A24Q8N4F4 322 aa12.84□□□□□ -0.35
LMNA-209ENST00000459904 SLC30A7Q8NEW0 376 aa12.84□□□□□ -0.35
LMNA-209ENST00000459904 OR4K5Q8NGD3 323 aa12.84□□□□□ -0.35
LMNA-209ENST00000459904 OR4D11Q8NGI4 311 aa12.84□□□□□ -0.35
LMNA-209ENST00000459904 FAM216AQ8WUB2 273 aa12.84□□□□□ -0.35
LMNA-209ENST00000459904 DNAJA4Q8WW22 397 aaPredicted RBP12.84□□□□□ -0.35
LMNA-209ENST00000459904 STON2Q8WXE9 905 aa12.84□□□□□ -0.35
LMNA-209ENST00000459904 CCDC28BQ9BUN5 200 aa12.84□□□□□ -0.35
LMNA-209ENST00000459904 TMEM27Q9HBJ8 222 aa12.84□□□□□ -0.35
LMNA-209ENST00000459904 HINT3Q9NQE9 182 aaKnown RBP12.84□□□□□ -0.35
LMNA-209ENST00000459904 DCAF16Q9NXF7 216 aa12.84□□□□□ -0.35
LMNA-209ENST00000459904 MRPL39Q9NYK5 338 aaKnown RBP12.84□□□□□ -0.35
LMNA-209ENST00000459904 VAPAQ9P0L0 249 aa12.84□□□□□ -0.35
LMNA-209ENST00000459904 SLC7A8Q9UHI5 535 aa12.84□□□□□ -0.35
LMNA-209ENST00000459904 TRAV20A0A0B4J274 112 aa12.83□□□□□ -0.36
LMNA-209ENST00000459904 CPSF4LA6NMK7 179 aaKnown RBP12.83□□□□□ -0.36
LMNA-209ENST00000459904 TRIM77I1YAP6 450 aa12.83□□□□□ -0.36
LMNA-209ENST00000459904 LYPD3O95274 346 aa12.83□□□□□ -0.36
LMNA-209ENST00000459904 ETS2P15036 469 aa12.83□□□□□ -0.36
LMNA-209ENST00000459904 COMPP49747 757 aaPredicted RBP12.83□□□□□ -0.36
LMNA-209ENST00000459904 RPS23P62266 143 aaKnown RBP12.83□□□□□ -0.36
LMNA-209ENST00000459904 LCN2P80188 198 aa12.83□□□□□ -0.36
LMNA-209ENST00000459904 RBBP4Q09028 425 aa12.83□□□□□ -0.36
LMNA-209ENST00000459904 SCARB2Q14108 478 aa12.83□□□□□ -0.36
LMNA-209ENST00000459904 NPTX1Q15818 432 aa12.83□□□□□ -0.36
LMNA-209ENST00000459904 REEP3Q6NUK4 255 aa12.83□□□□□ -0.36
LMNA-209ENST00000459904 ACSM5Q6NUN0 579 aa12.83□□□□□ -0.36
LMNA-209ENST00000459904 MSANTD1Q6ZTZ1 278 aa12.83□□□□□ -0.36
LMNA-209ENST00000459904 OR5J2Q8NH18 312 aa12.83□□□□□ -0.36
LMNA-209ENST00000459904 VANGL1Q8TAA9 524 aaPredicted RBP12.83□□□□□ -0.36
LMNA-209ENST00000459904 SYNPRQ8TBG9 265 aa12.83□□□□□ -0.36
LMNA-209ENST00000459904 BCAS4Q8TDM0 211 aa12.83□□□□□ -0.36
LMNA-209ENST00000459904 ZFAND2BQ8WV99 257 aa12.83□□□□□ -0.36
LMNA-209ENST00000459904 ZNF347Q96SE7 839 aa12.83□□□□□ -0.36
LMNA-209ENST00000459904 MCHR1Q99705 422 aa12.83□□□□□ -0.36
LMNA-209ENST00000459904 ZNF416Q9BWM5 594 aa12.83□□□□□ -0.36
LMNA-209ENST00000459904 CDH20Q9HBT6 801 aa12.83□□□□□ -0.36
LMNA-209ENST00000459904 TCF7L2Q9NQB0 619 aa12.83□□□□□ -0.36
LMNA-209ENST00000459904 TMEM38BQ9NVV0 291 aa12.83□□□□□ -0.36
LMNA-209ENST00000459904 THUMPD1Q9NXG2 353 aaKnown RBP12.83□□□□□ -0.36
LMNA-209ENST00000459904 TAS2R5Q9NYW4 299 aa12.83□□□□□ -0.36
LMNA-209ENST00000459904 GLTPQ9NZD2 209 aa12.83□□□□□ -0.36
LMNA-209ENST00000459904 SELENONQ9NZV5 590 aa12.83□□□□□ -0.36
LMNA-209ENST00000459904 OPN4Q9UHM6 478 aa12.83□□□□□ -0.36
LMNA-209ENST00000459904 WIPI2Q9Y4P8 454 aa12.83□□□□□ -0.36
LMNA-209ENST00000459904 CORINQ9Y5Q5 1042 aa12.83□□□□□ -0.36
LMNA-209ENST00000459904 IGHV1-69-2A0A0G2JMI3 117 aa12.82□□□□□ -0.36
LMNA-209ENST00000459904 SPRY3O43610 288 aa12.82□□□□□ -0.36
LMNA-209ENST00000459904 QDPRP09417 244 aa12.82□□□□□ -0.36
LMNA-209ENST00000459904 OR8G3PP0DMU2 310 aa12.82□□□□□ -0.36
LMNA-209ENST00000459904 CCNOP22674 350 aa12.82□□□□□ -0.36
LMNA-209ENST00000459904 MPV17P39210 176 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms