RNA–Protein interactions for RNA: ENST00000458707.1

VPS50-208, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-208ENST00000458707 GPN3Q9UHW5 284 aaPredicted RBP7.73□□□□□ -1.17
VPS50-208ENST00000458707 PILRAQ9UKJ1 303 aa7.73□□□□□ -1.17
VPS50-208ENST00000458707 MRPS23Q9Y3D9 190 aaKnown RBP7.73□□□□□ -1.17
VPS50-208ENST00000458707 ZNF337Q9Y3M9 751 aa7.73□□□□□ -1.17
VPS50-208ENST00000458707 A0A087WUJ7 227 aa7.72□□□□□ -1.17
VPS50-208ENST00000458707 FXYD6-FXYD2A0A087WZ82 144 aa7.72□□□□□ -1.17
VPS50-208ENST00000458707 TMEM272A0A1B0GTI8 110 aa7.72□□□□□ -1.17
VPS50-208ENST00000458707 A0A1B0GW55 424 aa7.72□□□□□ -1.17
VPS50-208ENST00000458707 GGT3PA6NGU5 568 aa7.72□□□□□ -1.17
VPS50-208ENST00000458707 NPIPB9F8W1W9 429 aa7.72□□□□□ -1.17
VPS50-208ENST00000458707 DNASE2O00115 360 aaPredicted RBP7.72□□□□□ -1.17
VPS50-208ENST00000458707 GOSR2O14653 212 aa7.72□□□□□ -1.17
VPS50-208ENST00000458707 IMPA2O14732 288 aa7.72□□□□□ -1.17
VPS50-208ENST00000458707 EIF4E2O60573 245 aaKnown RBP7.72□□□□□ -1.17
VPS50-208ENST00000458707 CTSVO60911 334 aa7.72□□□□□ -1.17
VPS50-208ENST00000458707 ZNF432O94892 652 aa7.72□□□□□ -1.17
VPS50-208ENST00000458707 SIX6O95475 246 aa7.72□□□□□ -1.17
VPS50-208ENST00000458707 POU2F2P09086 479 aa7.72□□□□□ -1.17
VPS50-208ENST00000458707 UBBP0CG47 229 aa7.72□□□□□ -1.17
VPS50-208ENST00000458707 UBCP0CG48 685 aaKnown RBP7.72□□□□□ -1.17
VPS50-208ENST00000458707 DUX4L2P0CJ85 424 aa7.72□□□□□ -1.17
VPS50-208ENST00000458707 DUX4L3P0CJ86 424 aa7.72□□□□□ -1.17
VPS50-208ENST00000458707 DUX4L4P0CJ87 422 aa7.72□□□□□ -1.17
VPS50-208ENST00000458707 DUX4L5P0CJ88 424 aa7.72□□□□□ -1.17
VPS50-208ENST00000458707 DUX4L6P0CJ89 424 aa7.72□□□□□ -1.17
VPS50-208ENST00000458707 DUX4L7P0CJ90 424 aa7.72□□□□□ -1.17
VPS50-208ENST00000458707 AKAIN1P0CW23 69 aa7.72□□□□□ -1.17
VPS50-208ENST00000458707 EN2P19622 333 aaPredicted RBP7.72□□□□□ -1.17
VPS50-208ENST00000458707 S100PP25815 95 aa7.72□□□□□ -1.17
VPS50-208ENST00000458707 EIF2S3P41091 472 aaKnown RBP7.72□□□□□ -1.17
VPS50-208ENST00000458707 PRMT2P55345 433 aa7.72□□□□□ -1.17
VPS50-208ENST00000458707 RPS27AP62979 156 aaKnown RBP7.72□□□□□ -1.17
VPS50-208ENST00000458707 UBA52P62987 128 aaKnown RBP7.72□□□□□ -1.17
VPS50-208ENST00000458707 KIR2DS3Q14952 304 aa7.72□□□□□ -1.17
VPS50-208ENST00000458707 CST6Q15828 149 aa7.72□□□□□ -1.17
VPS50-208ENST00000458707 ZNF141Q15928 474 aa7.72□□□□□ -1.17
VPS50-208ENST00000458707 DCAF12L2Q5VW00 463 aa7.72□□□□□ -1.17
VPS50-208ENST00000458707 ANKRD16Q6P6B7 361 aa7.72□□□□□ -1.17
VPS50-208ENST00000458707 TSSK4Q6SA08 328 aa7.72□□□□□ -1.17
VPS50-208ENST00000458707 KIRREL2Q6UWL6 708 aa7.72□□□□□ -1.17
VPS50-208ENST00000458707 DEFB123Q8N688 67 aa7.72□□□□□ -1.17
VPS50-208ENST00000458707 CAMKVQ8NCB2 501 aa7.72□□□□□ -1.17
VPS50-208ENST00000458707 TMEM52Q8NDY8 209 aa7.72□□□□□ -1.17
VPS50-208ENST00000458707 OR6K6Q8NGW6 343 aa7.72□□□□□ -1.17
VPS50-208ENST00000458707 OR5AK2Q8NH90 309 aa7.72□□□□□ -1.17
VPS50-208ENST00000458707 DOK4Q8TEW6 326 aa7.72□□□□□ -1.17
VPS50-208ENST00000458707 ZNF296Q8WUU4 475 aaPredicted RBP7.72□□□□□ -1.17
VPS50-208ENST00000458707 ST8SIA2Q92186 375 aa7.72□□□□□ -1.17
VPS50-208ENST00000458707 RSC1A1Q92681 617 aa7.72□□□□□ -1.17
VPS50-208ENST00000458707 CCDC74AQ96AQ1 378 aa7.72□□□□□ -1.17
VPS50-208ENST00000458707 ZNF707Q96C28 371 aaPredicted RBP7.72□□□□□ -1.17
VPS50-208ENST00000458707 DEFB118Q96PH6 123 aa7.72□□□□□ -1.17
VPS50-208ENST00000458707 GAS2L1Q99501 681 aaPredicted RBP7.72□□□□□ -1.17
VPS50-208ENST00000458707 FXYD6Q9H0Q3 95 aa7.72□□□□□ -1.17
VPS50-208ENST00000458707 PRO3102Q9H379 93 aa7.72□□□□□ -1.17
VPS50-208ENST00000458707 FKRPQ9H9S5 495 aa7.72□□□□□ -1.17
VPS50-208ENST00000458707 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.72□□□□□ -1.17
VPS50-208ENST00000458707 UFSP2Q9NUQ7 469 aa7.72□□□□□ -1.17
VPS50-208ENST00000458707 FRRS1LQ9P0K9 344 aa7.72□□□□□ -1.17
VPS50-208ENST00000458707 DUX4Q9UBX2 424 aa7.72□□□□□ -1.17
VPS50-208ENST00000458707 EPHA6Q9UF33 1036 aa7.72□□□□□ -1.17
VPS50-208ENST00000458707 SERGEFQ9UGK8 458 aa7.72□□□□□ -1.17
VPS50-208ENST00000458707 STEAP1Q9UHE8 339 aa7.72□□□□□ -1.17
VPS50-208ENST00000458707 MRM2Q9UI43 246 aaKnown RBP7.72□□□□□ -1.17
VPS50-208ENST00000458707 FBXL2Q9UKC9 423 aa7.72□□□□□ -1.17
VPS50-208ENST00000458707 MOKQ9UQ07 419 aa7.72□□□□□ -1.17
VPS50-208ENST00000458707 YBX2Q9Y2T7 364 aaKnown RBP7.72□□□□□ -1.17
VPS50-208ENST00000458707 UNC80Q8N2C7 3258 aa7.72□□□□□ -1.17
VPS50-208ENST00000458707 A0A087WV48 116 aa7.72□□□□□ -1.17
VPS50-208ENST00000458707 TBC1D3IA0A087WXS9 549 aa7.72□□□□□ -1.17
VPS50-208ENST00000458707 HSPB2A8KAH6 182 aa7.72□□□□□ -1.17
VPS50-208ENST00000458707 TERTO14746 1132 aaKnown RBP7.72□□□□□ -1.17
VPS50-208ENST00000458707 FOXS1O43638 330 aa7.72□□□□□ -1.17
VPS50-208ENST00000458707 PRAMEF2O60811 474 aa7.72□□□□□ -1.17
VPS50-208ENST00000458707 CTAG2O75638 210 aa7.72□□□□□ -1.17
VPS50-208ENST00000458707 CDC123O75794 336 aaPredicted RBP7.72□□□□□ -1.17
VPS50-208ENST00000458707 CBX7O95931 251 aa7.72□□□□□ -1.17
VPS50-208ENST00000458707 IGF2P01344 180 aa7.72□□□□□ -1.17
VPS50-208ENST00000458707 CD8AP01732 235 aa7.72□□□□□ -1.17
VPS50-208ENST00000458707 RLN2P04090 185 aa7.72□□□□□ -1.17
VPS50-208ENST00000458707 ITGB2P05107 769 aa7.72□□□□□ -1.17
VPS50-208ENST00000458707 SMIM6P0DI80 62 aa7.72□□□□□ -1.17
VPS50-208ENST00000458707 APEHP13798 732 aaKnown RBP7.72□□□□□ -1.17
VPS50-208ENST00000458707 MGMTP16455 207 aa7.72□□□□□ -1.17
VPS50-208ENST00000458707 C5AR1P21730 350 aa7.72□□□□□ -1.17
VPS50-208ENST00000458707 MST1P26927 711 aa7.72□□□□□ -1.17
VPS50-208ENST00000458707 IGFALSP35858 605 aa7.72□□□□□ -1.17
VPS50-208ENST00000458707 RPL4P36578 427 aaKnown RBP7.72□□□□□ -1.17
VPS50-208ENST00000458707 PRPS1P60891 318 aa7.72□□□□□ -1.17
VPS50-208ENST00000458707 PSG6Q00889 435 aa7.72□□□□□ -1.17
VPS50-208ENST00000458707 OC90Q02509 493 aaPredicted RBP7.72□□□□□ -1.17
VPS50-208ENST00000458707 SRSF4Q08170 494 aaKnown RBP7.72□□□□□ -1.17
VPS50-208ENST00000458707 PLA2G7Q13093 441 aa7.72□□□□□ -1.17
VPS50-208ENST00000458707 COTL1Q14019 142 aa7.72□□□□□ -1.17
VPS50-208ENST00000458707 HSPB2Q16082 182 aa7.72□□□□□ -1.17
VPS50-208ENST00000458707 C2orf27AQ580R0 203 aa7.72□□□□□ -1.17
VPS50-208ENST00000458707 LIPNQ5VXI9 398 aa7.72□□□□□ -1.17
VPS50-208ENST00000458707 FCRL6Q6DN72 434 aa7.72□□□□□ -1.17
VPS50-208ENST00000458707 ATRAIDQ6UW56 229 aa7.72□□□□□ -1.17
VPS50-208ENST00000458707 FAM220AQ7Z4H9 259 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms