RNA–Protein interactions for RNA: ENST00000457924.2

UPF3AP2-201, Transcript of UPF3A pseudogene 2, humanhuman

BASIC

Gene UPF3AP2, Length 1,132 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP2-201ENST00000457924 ULK3Q6PHR2 472 aa12.22□□□□□ -0.45
UPF3AP2-201ENST00000457924 USP51Q70EK9 711 aa12.22□□□□□ -0.45
UPF3AP2-201ENST00000457924 PIWIL3Q7Z3Z3 882 aaKnown RBP12.22□□□□□ -0.45
UPF3AP2-201ENST00000457924 ZNF584Q8IVC4 421 aa12.22□□□□□ -0.45
UPF3AP2-201ENST00000457924 SKA3Q8IX90 412 aa12.22□□□□□ -0.45
UPF3AP2-201ENST00000457924 SLC30A7Q8NEW0 376 aa12.22□□□□□ -0.45
UPF3AP2-201ENST00000457924 BBS10Q8TAM1 723 aa12.22□□□□□ -0.45
UPF3AP2-201ENST00000457924 C22orf15Q8WYQ4 148 aa12.22□□□□□ -0.45
UPF3AP2-201ENST00000457924 C11orf40Q8WZ69 217 aa12.22□□□□□ -0.45
UPF3AP2-201ENST00000457924 RAB1CQ92928 201 aa12.22□□□□□ -0.45
UPF3AP2-201ENST00000457924 RMND5AQ9H871 391 aa12.22□□□□□ -0.45
UPF3AP2-201ENST00000457924 BCL2L10Q9HD36 194 aa12.22□□□□□ -0.45
UPF3AP2-201ENST00000457924 PNPOQ9NVS9 261 aa12.22□□□□□ -0.45
UPF3AP2-201ENST00000457924 FRRS1LQ9P0K9 344 aa12.22□□□□□ -0.45
UPF3AP2-201ENST00000457924 WIPI2Q9Y4P8 454 aa12.22□□□□□ -0.45
UPF3AP2-201ENST00000457924 IGLV3-9A0A075B6K5 115 aa12.21□□□□□ -0.45
UPF3AP2-201ENST00000457924 C5orf58C9J3I9 102 aa12.21□□□□□ -0.45
UPF3AP2-201ENST00000457924 SDHDO14521 159 aa12.21□□□□□ -0.45
UPF3AP2-201ENST00000457924 SLC22A3O75751 556 aa12.21□□□□□ -0.45
UPF3AP2-201ENST00000457924 SERPINI2O75830 405 aa12.21□□□□□ -0.45
UPF3AP2-201ENST00000457924 MT-ND5P03915 603 aa12.21□□□□□ -0.45
UPF3AP2-201ENST00000457924 LCKP06239 509 aa12.21□□□□□ -0.45
UPF3AP2-201ENST00000457924 OR8G3PP0DMU2 310 aa12.21□□□□□ -0.45
UPF3AP2-201ENST00000457924 ZNF250P15622 560 aa12.21□□□□□ -0.45
UPF3AP2-201ENST00000457924 HTR2AP28223 471 aa12.21□□□□□ -0.45
UPF3AP2-201ENST00000457924 PRKAR1BP31321 381 aa12.21□□□□□ -0.45
UPF3AP2-201ENST00000457924 CSNK1A1P48729 337 aa12.21□□□□□ -0.45
UPF3AP2-201ENST00000457924 STX3Q13277 289 aa12.21□□□□□ -0.45
UPF3AP2-201ENST00000457924 MOGQ16653 247 aa12.21□□□□□ -0.45
UPF3AP2-201ENST00000457924 GTDC1Q4AE62 458 aa12.21□□□□□ -0.45
UPF3AP2-201ENST00000457924 FAM91A1Q658Y4 838 aa12.21□□□□□ -0.45
UPF3AP2-201ENST00000457924 PXKQ7Z7A4 578 aa12.21□□□□□ -0.45
UPF3AP2-201ENST00000457924 SLC22A24Q8N4F4 322 aa12.21□□□□□ -0.45
UPF3AP2-201ENST00000457924 C10orf53Q8N6V4 93 aa12.21□□□□□ -0.45
UPF3AP2-201ENST00000457924 ZNF519Q8TB69 540 aa12.21□□□□□ -0.45
UPF3AP2-201ENST00000457924 SLC47A1Q96FL8 570 aa12.21□□□□□ -0.45
UPF3AP2-201ENST00000457924 ITCHQ96J02 903 aa12.21□□□□□ -0.45
UPF3AP2-201ENST00000457924 TSPAN32Q96QS1 320 aa12.21□□□□□ -0.45
UPF3AP2-201ENST00000457924 OR51B6Q9H340 312 aa12.21□□□□□ -0.45
UPF3AP2-201ENST00000457924 CDH20Q9HBT6 801 aa12.21□□□□□ -0.45
UPF3AP2-201ENST00000457924 MRPL39Q9NYK5 338 aaKnown RBP12.21□□□□□ -0.45
UPF3AP2-201ENST00000457924 FARS2O95363 451 aaKnown RBP12.2□□□□□ -0.46
UPF3AP2-201ENST00000457924 BGLAPP02818 100 aa12.2□□□□□ -0.46
UPF3AP2-201ENST00000457924 CCL2P13500 99 aa12.2□□□□□ -0.46
UPF3AP2-201ENST00000457924 IDO1P14902 403 aa12.2□□□□□ -0.46
UPF3AP2-201ENST00000457924 BGNP21810 368 aa12.2□□□□□ -0.46
UPF3AP2-201ENST00000457924 DRD4P21917 467 aa12.2□□□□□ -0.46
UPF3AP2-201ENST00000457924 EPHA3P29320 983 aa12.2□□□□□ -0.46
UPF3AP2-201ENST00000457924 BIDP55957 195 aa12.2□□□□□ -0.46
UPF3AP2-201ENST00000457924 NCALDP61601 193 aa12.2□□□□□ -0.46
UPF3AP2-201ENST00000457924 RGNQ15493 299 aa12.2□□□□□ -0.46
UPF3AP2-201ENST00000457924 NHLRC1Q6VVB1 395 aa12.2□□□□□ -0.46
UPF3AP2-201ENST00000457924 WDFY1Q8IWB7 410 aa12.2□□□□□ -0.46
UPF3AP2-201ENST00000457924 FGFBP3Q8TAT2 258 aa12.2□□□□□ -0.46
UPF3AP2-201ENST00000457924 MAL2Q969L2 176 aa12.2□□□□□ -0.46
UPF3AP2-201ENST00000457924 VPS33AQ96AX1 596 aa12.2□□□□□ -0.46
UPF3AP2-201ENST00000457924 MOGAT1Q96PD6 335 aa12.2□□□□□ -0.46
UPF3AP2-201ENST00000457924 CITED4Q96RK1 184 aa12.2□□□□□ -0.46
UPF3AP2-201ENST00000457924 GAL3ST1Q99999 423 aa12.2□□□□□ -0.46
UPF3AP2-201ENST00000457924 LRMDAQ9H2I8 198 aa12.2□□□□□ -0.46
UPF3AP2-201ENST00000457924 C1orf198Q9H425 327 aa12.2□□□□□ -0.46
UPF3AP2-201ENST00000457924 RAD21L1Q9H4I0 556 aa12.2□□□□□ -0.46
UPF3AP2-201ENST00000457924 RNF121Q9H920 327 aa12.2□□□□□ -0.46
UPF3AP2-201ENST00000457924 SAP30LQ9HAJ7 183 aa12.2□□□□□ -0.46
UPF3AP2-201ENST00000457924 A4GALTQ9NPC4 353 aa12.2□□□□□ -0.46
UPF3AP2-201ENST00000457924 OPN4Q9UHM6 478 aa12.2□□□□□ -0.46
UPF3AP2-201ENST00000457924 ARHGAP32A7KAX9 2087 aa12.2□□□□□ -0.46
UPF3AP2-201ENST00000457924 TRPC5OSA6NMA1 111 aa12.19□□□□□ -0.46
UPF3AP2-201ENST00000457924 PLPP3O14495 311 aa12.19□□□□□ -0.46
UPF3AP2-201ENST00000457924 TM9SF1O15321 606 aa12.19□□□□□ -0.46
UPF3AP2-201ENST00000457924 FSHBP01225 129 aa12.19□□□□□ -0.46
UPF3AP2-201ENST00000457924 PTHP01270 115 aa12.19□□□□□ -0.46
UPF3AP2-201ENST00000457924 ETS2P15036 469 aa12.19□□□□□ -0.46
UPF3AP2-201ENST00000457924 PRTN3P24158 256 aa12.19□□□□□ -0.46
UPF3AP2-201ENST00000457924 ERVS71-1P61550 626 aa12.19□□□□□ -0.46
UPF3AP2-201ENST00000457924 LCN2P80188 198 aa12.19□□□□□ -0.46
UPF3AP2-201ENST00000457924 TSTQ16762 297 aaKnown RBP12.19□□□□□ -0.46
UPF3AP2-201ENST00000457924 TBC1D28Q2M2D7 210 aa12.19□□□□□ -0.46
UPF3AP2-201ENST00000457924 C6orf10Q5SRN2 563 aa12.19□□□□□ -0.46
UPF3AP2-201ENST00000457924 NXNQ6DKJ4 435 aa12.19□□□□□ -0.46
UPF3AP2-201ENST00000457924 TMEM53Q6P2H8 277 aa12.19□□□□□ -0.46
UPF3AP2-201ENST00000457924 MSANTD1Q6ZTZ1 278 aa12.19□□□□□ -0.46
UPF3AP2-201ENST00000457924 ZNF771Q7L3S4 317 aaPredicted RBP12.19□□□□□ -0.46
UPF3AP2-201ENST00000457924 DPPA2Q7Z7J5 298 aa12.19□□□□□ -0.46
UPF3AP2-201ENST00000457924 PAQR4Q8N4S7 273 aaPredicted RBP12.19□□□□□ -0.46
UPF3AP2-201ENST00000457924 SIGLECL1Q8N7X8 197 aa12.19□□□□□ -0.46
UPF3AP2-201ENST00000457924 ICA1LQ8NDH6 482 aa12.19□□□□□ -0.46
UPF3AP2-201ENST00000457924 OR1J2Q8NGS2 313 aa12.19□□□□□ -0.46
UPF3AP2-201ENST00000457924 DVL3Q92997 716 aaPredicted RBP12.19□□□□□ -0.46
UPF3AP2-201ENST00000457924 TMEM54Q969K7 222 aa12.19□□□□□ -0.46
UPF3AP2-201ENST00000457924 ELMOD3Q96FG2 381 aa12.19□□□□□ -0.46
UPF3AP2-201ENST00000457924 SH3GL3Q99963 347 aa12.19□□□□□ -0.46
UPF3AP2-201ENST00000457924 SPATA5L1Q9BVQ7 753 aa12.19□□□□□ -0.46
UPF3AP2-201ENST00000457924 BCL2L14Q9BZR8 327 aa12.19□□□□□ -0.46
UPF3AP2-201ENST00000457924 WDR55Q9H6Y2 383 aaPredicted RBP12.19□□□□□ -0.46
UPF3AP2-201ENST00000457924 UNKLQ9H9P5 680 aaKnown RBP12.19□□□□□ -0.46
UPF3AP2-201ENST00000457924 ZMAT3Q9HA38 289 aaKnown RBP12.19□□□□□ -0.46
UPF3AP2-201ENST00000457924 TMEM27Q9HBJ8 222 aa12.19□□□□□ -0.46
UPF3AP2-201ENST00000457924 GLTPQ9NZD2 209 aa12.19□□□□□ -0.46
UPF3AP2-201ENST00000457924 TESQ9UGI8 421 aaKnown RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms