RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 KRT74Q7RTS7 529 aa15.03■□□□□ -0
CCDC43-202ENST00000457422 LIX1LQ8IVB5 337 aa15.03■□□□□ -0
CCDC43-202ENST00000457422 ZNF417Q8TAU3 575 aa15.03■□□□□ -0
CCDC43-202ENST00000457422 SLC25A38Q96DW6 304 aa15.03■□□□□ -0
CCDC43-202ENST00000457422 CCDC74BQ96LY2 380 aa15.03■□□□□ -0
CCDC43-202ENST00000457422 FOXN4Q96NZ1 517 aa15.03■□□□□ -0
CCDC43-202ENST00000457422 DCBLD2Q96PD2 775 aa15.03■□□□□ -0
CCDC43-202ENST00000457422 OR8B4Q96RC9 309 aa15.03■□□□□ -0
CCDC43-202ENST00000457422 ZNF587Q96SQ5 575 aaPredicted RBP15.03■□□□□ -0
CCDC43-202ENST00000457422 AMELYQ99218 206 aa15.03■□□□□ -0
CCDC43-202ENST00000457422 TRAF4Q9BUZ4 470 aaPredicted RBP15.03■□□□□ -0
CCDC43-202ENST00000457422 BEX2Q9BXY8 128 aa15.03■□□□□ -0
CCDC43-202ENST00000457422 DPAGT1Q9H3H5 408 aa15.03■□□□□ -0
CCDC43-202ENST00000457422 TCF7L1Q9HCS4 588 aa15.03■□□□□ -0
CCDC43-202ENST00000457422 SLCO1C1Q9NYB5 712 aa15.03■□□□□ -0
CCDC43-202ENST00000457422 SUSD2Q9UGT4 822 aa15.03■□□□□ -0
CCDC43-202ENST00000457422 KCNG2Q9UJ96 466 aa15.03■□□□□ -0
CCDC43-202ENST00000457422 ALPK2Q86TB3 2170 aa15.02■□□□□ -0
CCDC43-202ENST00000457422 TNFSF12-TNFSF13A0A0A6YY99 330 aa15.02■□□□□ -0
CCDC43-202ENST00000457422 TRBV11-1A0A0K0K1C0 115 aa15.02■□□□□ -0
CCDC43-202ENST00000457422 TMEM200CA6NKL6 621 aa15.02■□□□□ -0
CCDC43-202ENST00000457422 MRPS15P82914 257 aaKnown RBP15.02■□□□□ -0
CCDC43-202ENST00000457422 MFSD13AQ14CX5 517 aa15.02■□□□□ -0
CCDC43-202ENST00000457422 LRRTM1Q86UE6 522 aa15.02■□□□□ -0
CCDC43-202ENST00000457422 ZNF433Q8N7K0 673 aaPredicted RBP15.02■□□□□ -0
CCDC43-202ENST00000457422 THRSPQ92748 146 aa15.02■□□□□ -0
CCDC43-202ENST00000457422 C4orf45Q96LM5 186 aa15.02■□□□□ -0
CCDC43-202ENST00000457422 ZFP3Q96NJ6 502 aa15.02■□□□□ -0
CCDC43-202ENST00000457422 NPAS1Q99742 590 aa15.02■□□□□ -0
CCDC43-202ENST00000457422 COPZ2Q9P299 210 aa15.02■□□□□ -0
CCDC43-202ENST00000457422 SLC22A23A1A5C7 686 aa15.02□□□□□ -0.01
CCDC43-202ENST00000457422 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.02□□□□□ -0.01
CCDC43-202ENST00000457422 ETV2O00321 342 aaPredicted RBP15.02□□□□□ -0.01
CCDC43-202ENST00000457422 ZNF593O00488 134 aaPredicted RBP15.02□□□□□ -0.01
CCDC43-202ENST00000457422 GSTT2P0CG29 244 aa15.02□□□□□ -0.01
CCDC43-202ENST00000457422 GSTT2BP0CG30 244 aa15.02□□□□□ -0.01
CCDC43-202ENST00000457422 IL11P20809 199 aa15.02□□□□□ -0.01
CCDC43-202ENST00000457422 APOBEC1P41238 236 aaKnown RBP15.02□□□□□ -0.01
CCDC43-202ENST00000457422 SOX2P48431 317 aa15.02□□□□□ -0.01
CCDC43-202ENST00000457422 CCR9P51686 369 aa15.02□□□□□ -0.01
CCDC43-202ENST00000457422 EMP2P54851 167 aa15.02□□□□□ -0.01
CCDC43-202ENST00000457422 ZP4Q12836 540 aa15.02□□□□□ -0.01
CCDC43-202ENST00000457422 DYRK1AQ13627 763 aa15.02□□□□□ -0.01
CCDC43-202ENST00000457422 SIAH3Q8IW03 269 aa15.02□□□□□ -0.01
CCDC43-202ENST00000457422 IZUMO1Q8IYV9 350 aa15.02□□□□□ -0.01
CCDC43-202ENST00000457422 PRSS35Q8N3Z0 413 aa15.02□□□□□ -0.01
CCDC43-202ENST00000457422 GPR148Q8TDV2 347 aa15.02□□□□□ -0.01
CCDC43-202ENST00000457422 TTC9Q92623 222 aa15.02□□□□□ -0.01
CCDC43-202ENST00000457422 LIN7BQ9HAP6 207 aa15.02□□□□□ -0.01
CCDC43-202ENST00000457422 PLEKHA1Q9HB21 404 aa15.02□□□□□ -0.01
CCDC43-202ENST00000457422 GALNT9Q9HCQ5 603 aa15.02□□□□□ -0.01
CCDC43-202ENST00000457422 MRPL22Q9NWU5 206 aaKnown RBP15.02□□□□□ -0.01
CCDC43-202ENST00000457422 PILRBQ9UKJ0 227 aa15.02□□□□□ -0.01
CCDC43-202ENST00000457422 MRPS7Q9Y2R9 242 aaKnown RBP15.02□□□□□ -0.01
CCDC43-202ENST00000457422 NUBP2Q9Y5Y2 271 aa15.02□□□□□ -0.01
CCDC43-202ENST00000457422 NPIPB13A6NJU9 1138 aa15.01□□□□□ -0.01
CCDC43-202ENST00000457422 NPIPB4C9JG80 1138 aa15.01□□□□□ -0.01
CCDC43-202ENST00000457422 SLC16A7O60669 478 aa15.01□□□□□ -0.01
CCDC43-202ENST00000457422 ADRB1P08588 477 aa15.01□□□□□ -0.01
CCDC43-202ENST00000457422 RAB40ALP0C0E4 278 aa15.01□□□□□ -0.01
CCDC43-202ENST00000457422 CTLA4P16410 223 aa15.01□□□□□ -0.01
CCDC43-202ENST00000457422 ADRA2CP18825 462 aa15.01□□□□□ -0.01
CCDC43-202ENST00000457422 ROM1Q03395 351 aa15.01□□□□□ -0.01
CCDC43-202ENST00000457422 KLF9Q13886 244 aaPredicted RBP15.01□□□□□ -0.01
CCDC43-202ENST00000457422 MELKQ14680 651 aa15.01□□□□□ -0.01
CCDC43-202ENST00000457422 SLC17A1Q14916 467 aa15.01□□□□□ -0.01
CCDC43-202ENST00000457422 CDK10Q15131 360 aa15.01□□□□□ -0.01
CCDC43-202ENST00000457422 HLA-BQ31612 363 aa15.01□□□□□ -0.01
CCDC43-202ENST00000457422 FCRLAQ7L513 359 aa15.01□□□□□ -0.01
CCDC43-202ENST00000457422 ZSCAN2Q7Z7L9 614 aaPredicted RBP15.01□□□□□ -0.01
CCDC43-202ENST00000457422 ZNF679Q8IYX0 411 aa15.01□□□□□ -0.01
CCDC43-202ENST00000457422 ZNF676Q8N7Q3 588 aa15.01□□□□□ -0.01
CCDC43-202ENST00000457422 OR5L2Q8NGL0 311 aa15.01□□□□□ -0.01
CCDC43-202ENST00000457422 MFSD8Q8NHS3 518 aa15.01□□□□□ -0.01
CCDC43-202ENST00000457422 RAB40AQ8WXH6 277 aa15.01□□□□□ -0.01
CCDC43-202ENST00000457422 AKAP1Q92667 903 aaKnown RBP eCLIP15.01□□□□□ -0.01
CCDC43-202ENST00000457422 PMEPA1Q969W9 287 aa15.01□□□□□ -0.01
CCDC43-202ENST00000457422 SPSB2Q99619 263 aa15.01□□□□□ -0.01
CCDC43-202ENST00000457422 ETV7Q9Y603 341 aa15.01□□□□□ -0.01
CCDC43-202ENST00000457422 C7orf66A4D0T2 115 aa15.01□□□□□ -0.01
CCDC43-202ENST00000457422 GPR171O14626 319 aa15.01□□□□□ -0.01
CCDC43-202ENST00000457422 HLA-DQA2P01906 255 aa15.01□□□□□ -0.01
CCDC43-202ENST00000457422 CYC1P08574 325 aa15.01□□□□□ -0.01
CCDC43-202ENST00000457422 CRABP1P29762 137 aa15.01□□□□□ -0.01
CCDC43-202ENST00000457422 KIR3DL2P43630 455 aa15.01□□□□□ -0.01
CCDC43-202ENST00000457422 SCAND1P57086 179 aa15.01□□□□□ -0.01
CCDC43-202ENST00000457422 RAB25P57735 213 aa15.01□□□□□ -0.01
CCDC43-202ENST00000457422 PUDPQ08623 228 aa15.01□□□□□ -0.01
CCDC43-202ENST00000457422 MEP1BQ16820 701 aa15.01□□□□□ -0.01
CCDC43-202ENST00000457422 TEX30Q5JUR7 227 aa15.01□□□□□ -0.01
CCDC43-202ENST00000457422 SLC18B1Q6NT16 456 aa15.01□□□□□ -0.01
CCDC43-202ENST00000457422 LRRN1Q6UXK5 716 aa15.01□□□□□ -0.01
CCDC43-202ENST00000457422 RNF128Q8TEB7 428 aa15.01□□□□□ -0.01
CCDC43-202ENST00000457422 ATOH1Q92858 354 aaPredicted RBP15.01□□□□□ -0.01
CCDC43-202ENST00000457422 NAT6Q93015 286 aa15.01□□□□□ -0.01
CCDC43-202ENST00000457422 C8orf44Q96CB5 159 aa15.01□□□□□ -0.01
CCDC43-202ENST00000457422 NXPE2Q96DL1 559 aa15.01□□□□□ -0.01
CCDC43-202ENST00000457422 SLC26A1Q9H2B4 701 aa15.01□□□□□ -0.01
CCDC43-202ENST00000457422 PRDM6Q9NQX0 595 aa15.01□□□□□ -0.01
CCDC43-202ENST00000457422 ZNF275Q9NSD4 429 aaPredicted RBP15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms