RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 SMIM19Q96E16 107 aa4.11□□□□□ -1.75
DEPDC1-202ENST00000456315 SEH1LQ96EE3 360 aa4.11□□□□□ -1.75
DEPDC1-202ENST00000456315 PRAP1Q96NZ9 151 aa4.11□□□□□ -1.75
DEPDC1-202ENST00000456315 TNFRSF13CQ96RJ3 184 aa4.11□□□□□ -1.75
DEPDC1-202ENST00000456315 SLC6A7Q99884 636 aa4.11□□□□□ -1.75
DEPDC1-202ENST00000456315 ZNF471Q9BX82 626 aaPredicted RBP4.11□□□□□ -1.75
DEPDC1-202ENST00000456315 TGIF2Q9GZN2 237 aa4.11□□□□□ -1.75
DEPDC1-202ENST00000456315 FRRS1LQ9P0K9 344 aa4.11□□□□□ -1.75
DEPDC1-202ENST00000456315 CRLS1Q9UJA2 301 aa4.11□□□□□ -1.75
DEPDC1-202ENST00000456315 RFPL4AA6NLU0 287 aa4.11□□□□□ -1.75
DEPDC1-202ENST00000456315 RFPL4AL1F8VTS6 287 aa4.11□□□□□ -1.75
DEPDC1-202ENST00000456315 GSTZ1O43708 216 aaPredicted RBP4.11□□□□□ -1.75
DEPDC1-202ENST00000456315 ABHD16AO95870 558 aa4.11□□□□□ -1.75
DEPDC1-202ENST00000456315 CPT2P23786 658 aa4.11□□□□□ -1.75
DEPDC1-202ENST00000456315 CASRP41180 1078 aa4.11□□□□□ -1.75
DEPDC1-202ENST00000456315 ST8SIA6P61647 398 aa4.11□□□□□ -1.75
DEPDC1-202ENST00000456315 Q3ZCU0 254 aa4.11□□□□□ -1.75
DEPDC1-202ENST00000456315 FAM166AQ6J272 317 aa4.11□□□□□ -1.75
DEPDC1-202ENST00000456315 ZNF783Q6ZMS7 281 aa4.11□□□□□ -1.75
DEPDC1-202ENST00000456315 HDDC2Q7Z4H3 204 aa4.11□□□□□ -1.75
DEPDC1-202ENST00000456315 DEFB132Q7Z7B7 95 aa4.11□□□□□ -1.75
DEPDC1-202ENST00000456315 SFTPA2Q8IWL1 248 aa4.11□□□□□ -1.75
DEPDC1-202ENST00000456315 ADAD2Q8NCV1 583 aaKnown RBP4.11□□□□□ -1.75
DEPDC1-202ENST00000456315 C1orf216Q8TAB5 229 aa4.11□□□□□ -1.75
DEPDC1-202ENST00000456315 MITD1Q8WV92 249 aa4.11□□□□□ -1.75
DEPDC1-202ENST00000456315 TRIM43Q96BQ3 446 aaPredicted RBP4.11□□□□□ -1.75
DEPDC1-202ENST00000456315 MRGPRX3Q96LB0 322 aa4.11□□□□□ -1.75
DEPDC1-202ENST00000456315 RBM14Q96PK6 669 aaKnown RBP4.11□□□□□ -1.75
DEPDC1-202ENST00000456315 SNHG12Q9BXW3 62 aa4.11□□□□□ -1.75
DEPDC1-202ENST00000456315 ICAM5Q9UMF0 924 aa4.11□□□□□ -1.75
DEPDC1-202ENST00000456315 FOXJ3Q9UPW0 622 aa4.11□□□□□ -1.75
DEPDC1-202ENST00000456315 ZNF292O60281 2723 aa4.11□□□□□ -1.75
DEPDC1-202ENST00000456315 A0A1B0GWJ7 208 aa4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 FOXE1O00358 373 aaPredicted RBP4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 GOSR2O14653 212 aa4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 OGG1O15527 345 aa4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 HIST1H2BKO60814 126 aa4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 KHDRBS3O75525 346 aaKnown RBP4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 RLN1P04808 185 aa4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 RB1P06400 928 aa4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 HIST1H2BJP06899 126 aa4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 SRMP19623 302 aa4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 HIST1H2BOP23527 126 aa4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 HIST1H2BBP33778 126 aa4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 SPAM1P38567 509 aa4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 STAT5AP42229 794 aa4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 PRMT2P55345 433 aa4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 HIST1H2BDP58876 126 aa4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 HIST1H2BCP62807 126 aa4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 PPP1R1AQ13522 171 aa4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 HIST2H2BEQ16778 126 aa4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 NDUFAF6Q330K2 333 aa4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 TMCO2Q7Z6W1 182 aaPredicted RBP4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 OR4N5Q8IXE1 308 aa4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 OR6V1Q8N148 313 aa4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 CBARPQ8N350 705 aaPredicted RBP4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 ZNF383Q8NA42 475 aa4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 TMEM104Q8NE00 496 aa4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 HIST1H2BHQ93079 126 aa4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 FOXN4Q96NZ1 517 aa4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 HIST1H2BNQ99877 126 aa4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 HIST1H2BMQ99879 126 aa4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 ZNF426Q9BUY5 554 aa4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 MRPS30Q9NP92 439 aaKnown RBP4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 OR2S2Q9NQN1 319 aa4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 KLHL9Q9P2J3 617 aa4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 HRNRQ86YZ3 2850 aaPredicted RBP4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 C2orf16Q68DN1 1984 aa4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 TMEM235A6NFC5 223 aa4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 PQBP1O60828 265 aaKnown RBP4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 RP2O75695 350 aa4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 CTSBP07858 339 aa4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 HCKP08631 526 aa4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 OR4E1P0C645 316 aa4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 OR8G3PP0DMU2 310 aa4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 HIST1H1CP16403 213 aaKnown RBP4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 MGMTP16455 207 aa4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 NME2P22392 152 aa4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 G0S2P27469 103 aa4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 ITPKBP27987 946 aa4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 AQP2P41181 271 aa4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 TLE1Q04724 770 aa4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 SQSTM1Q13501 440 aa4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 RPL7L1Q6DKI1 246 aaKnown RBP4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 ABLIM2Q6H8Q1 611 aa4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 C3orf33Q6P1S2 294 aa4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 PRSS41Q7RTY9 318 aa4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 SZRD1Q7Z422 152 aa4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 C19orf47Q8N9M1 422 aaKnown RBP4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 TEX19Q8NA77 164 aa4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 SLC30A7Q8NEW0 376 aa4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 OR5AR1Q8NGP9 310 aa4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 ACOT11Q8WXI4 607 aaPredicted RBP4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 PIK3IP1Q96FE7 263 aa4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 OR10C1Q96KK4 312 aa4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 TMEM68Q96MH6 324 aa4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 GNRHR2Q96P88 292 aa4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 EDEM2Q9BV94 578 aa4.1□□□□□ -1.75
DEPDC1-202ENST00000456315 LIME1Q9H400 295 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms