RNA–Protein interactions for RNA: ENST00000455661.5

PTPRE-204, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 2

Gene PTPRE, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-204ENST00000455661 PRAMEF17Q5VTA0 474 aa12.46□□□□□ -0.41
PTPRE-204ENST00000455661 H3F3CQ6NXT2 135 aa12.46□□□□□ -0.41
PTPRE-204ENST00000455661 KIRREL2Q6UWL6 708 aa12.46□□□□□ -0.41
PTPRE-204ENST00000455661 NDUFAF7Q7L592 441 aa12.46□□□□□ -0.41
PTPRE-204ENST00000455661 FAM122BQ7Z309 247 aa12.46□□□□□ -0.41
PTPRE-204ENST00000455661 OR2G2Q8NGZ5 317 aa12.46□□□□□ -0.41
PTPRE-204ENST00000455661 TSEN15Q8WW01 171 aaKnown RBP12.46□□□□□ -0.41
PTPRE-204ENST00000455661 MBNL1Q9NR56 388 aaKnown RBP12.46□□□□□ -0.41
PTPRE-204ENST00000455661 KLHDC2Q9Y2U9 406 aa12.46□□□□□ -0.41
PTPRE-204ENST00000455661 CARHSP1Q9Y2V2 147 aaKnown RBP12.46□□□□□ -0.41
PTPRE-204ENST00000455661 SPACA6W5XKT8 324 aa12.46□□□□□ -0.41
PTPRE-204ENST00000455661 FADS1O60427 444 aa12.46□□□□□ -0.41
PTPRE-204ENST00000455661 RAD1O60671 282 aa12.46□□□□□ -0.41
PTPRE-204ENST00000455661 FGF18O76093 207 aa12.46□□□□□ -0.41
PTPRE-204ENST00000455661 HLA-AP01891 365 aaKnown RBP12.46□□□□□ -0.41
PTPRE-204ENST00000455661 ADCYAP1P18509 176 aa12.46□□□□□ -0.41
PTPRE-204ENST00000455661 TM4SF4P48230 202 aa12.46□□□□□ -0.41
PTPRE-204ENST00000455661 PRKXP51817 358 aa12.46□□□□□ -0.41
PTPRE-204ENST00000455661 SLC25A1P53007 311 aa12.46□□□□□ -0.41
PTPRE-204ENST00000455661 RASGEF1BQ0VAM2 473 aa12.46□□□□□ -0.41
PTPRE-204ENST00000455661 TOMM20Q15388 145 aa12.46□□□□□ -0.41
PTPRE-204ENST00000455661 INPP5JQ15735 1006 aaPredicted RBP12.46□□□□□ -0.41
PTPRE-204ENST00000455661 GXYLT1Q4G148 440 aa12.46□□□□□ -0.41
PTPRE-204ENST00000455661 ATPAF1Q5TC12 328 aaPredicted RBP12.46□□□□□ -0.41
PTPRE-204ENST00000455661 TMEM71Q6P5X7 295 aa12.46□□□□□ -0.41
PTPRE-204ENST00000455661 ZNF813Q6ZN06 617 aa12.46□□□□□ -0.41
PTPRE-204ENST00000455661 ING5Q8WYH8 240 aa12.46□□□□□ -0.41
PTPRE-204ENST00000455661 ADAT1Q9BUB4 502 aaKnown RBP12.46□□□□□ -0.41
PTPRE-204ENST00000455661 SLCO5A1Q9H2Y9 848 aa12.46□□□□□ -0.41
PTPRE-204ENST00000455661 RRAGCQ9HB90 399 aa12.46□□□□□ -0.41
PTPRE-204ENST00000455661 FBXO4Q9UKT5 387 aa12.46□□□□□ -0.41
PTPRE-204ENST00000455661 PLEKHA6Q9Y2H5 1048 aa12.46□□□□□ -0.41
PTPRE-204ENST00000455661 COLEC10Q9Y6Z7 277 aa12.46□□□□□ -0.41
PTPRE-204ENST00000455661 A0A1B0GTH9 108 aa12.45□□□□□ -0.42
PTPRE-204ENST00000455661 H3BSH0 61 aa12.45□□□□□ -0.42
PTPRE-204ENST00000455661 M0QYG6 137 aa12.45□□□□□ -0.42
PTPRE-204ENST00000455661 P2RX6O15547 441 aa12.45□□□□□ -0.42
PTPRE-204ENST00000455661 FGF16O43320 207 aa12.45□□□□□ -0.42
PTPRE-204ENST00000455661 DNAJB6O75190 326 aa12.45□□□□□ -0.42
PTPRE-204ENST00000455661 ABHD16AO95870 558 aa12.45□□□□□ -0.42
PTPRE-204ENST00000455661 CYB5AP00167 134 aa12.45□□□□□ -0.42
PTPRE-204ENST00000455661 SPP1P10451 314 aa12.45□□□□□ -0.42
PTPRE-204ENST00000455661 CFPP27918 469 aa12.45□□□□□ -0.42
PTPRE-204ENST00000455661 MAP3K8P41279 467 aa12.45□□□□□ -0.42
PTPRE-204ENST00000455661 CDKN2AP42771 156 aaKnown RBP12.45□□□□□ -0.42
PTPRE-204ENST00000455661 ATP1B3P54709 279 aa12.45□□□□□ -0.42
PTPRE-204ENST00000455661 MESP2Q0VG99 397 aa12.45□□□□□ -0.42
PTPRE-204ENST00000455661 ODF4Q2M2E3 257 aa12.45□□□□□ -0.42
PTPRE-204ENST00000455661 PRICKLE4Q2TBC4 344 aa12.45□□□□□ -0.42
PTPRE-204ENST00000455661 SCGB2B2Q4G0G5 96 aa12.45□□□□□ -0.42
PTPRE-204ENST00000455661 C10orf91Q5T1B1 145 aa12.45□□□□□ -0.42
PTPRE-204ENST00000455661 CNKSR3Q6P9H4 555 aa12.45□□□□□ -0.42
PTPRE-204ENST00000455661 ZNF627Q7L945 461 aa12.45□□□□□ -0.42
PTPRE-204ENST00000455661 OR4E2Q8NGC2 313 aa12.45□□□□□ -0.42
PTPRE-204ENST00000455661 PAQR8Q8TEZ7 354 aa12.45□□□□□ -0.42
PTPRE-204ENST00000455661 SFT2D1Q8WV19 159 aa12.45□□□□□ -0.42
PTPRE-204ENST00000455661 SUSD6Q92537 303 aa12.45□□□□□ -0.42
PTPRE-204ENST00000455661 SEH1LQ96EE3 360 aa12.45□□□□□ -0.42
PTPRE-204ENST00000455661 TINAGL1Q9GZM7 467 aaPredicted RBP12.45□□□□□ -0.42
PTPRE-204ENST00000455661 EDARQ9UNE0 448 aa12.45□□□□□ -0.42
PTPRE-204ENST00000455661 A0A087WUJ7 227 aa12.45□□□□□ -0.42
PTPRE-204ENST00000455661 TBC1D3IA0A087WXS9 549 aa12.45□□□□□ -0.42
PTPRE-204ENST00000455661 FAM25EA8MYX2 175 aa12.45□□□□□ -0.42
PTPRE-204ENST00000455661 ZNF736B4DX44 427 aaPredicted RBP12.45□□□□□ -0.42
PTPRE-204ENST00000455661 SLC17A2O00624 439 aa12.45□□□□□ -0.42
PTPRE-204ENST00000455661 CCSO14618 274 aa12.45□□□□□ -0.42
PTPRE-204ENST00000455661 FGF17O60258 216 aa12.45□□□□□ -0.42
PTPRE-204ENST00000455661 RDH16O75452 317 aa12.45□□□□□ -0.42
PTPRE-204ENST00000455661 NKX2-2O95096 273 aa12.45□□□□□ -0.42
PTPRE-204ENST00000455661 ITGA5P08648 1049 aa12.45□□□□□ -0.42
PTPRE-204ENST00000455661 SMIM10L1P0DMW3 83 aa12.45□□□□□ -0.42
PTPRE-204ENST00000455661 GRK6P43250 576 aa12.45□□□□□ -0.42
PTPRE-204ENST00000455661 CAPZA1P52907 286 aa12.45□□□□□ -0.42
PTPRE-204ENST00000455661 SNRPNP63162 240 aaKnown RBP12.45□□□□□ -0.42
PTPRE-204ENST00000455661 UNQ6126/PRO20091Q6UXV3 157 aa12.45□□□□□ -0.42
PTPRE-204ENST00000455661 ABHD13Q7L211 337 aa12.45□□□□□ -0.42
PTPRE-204ENST00000455661 CDC20BQ86Y33 519 aa12.45□□□□□ -0.42
PTPRE-204ENST00000455661 BPIFB2Q8N4F0 458 aa12.45□□□□□ -0.42
PTPRE-204ENST00000455661 OR10AC1Q8NH08 325 aa12.45□□□□□ -0.42
PTPRE-204ENST00000455661 LCN9Q8WX39 176 aa12.45□□□□□ -0.42
PTPRE-204ENST00000455661 MCHR2Q969V1 340 aa12.45□□□□□ -0.42
PTPRE-204ENST00000455661 SMIM10Q96HG1 83 aa12.45□□□□□ -0.42
PTPRE-204ENST00000455661 TSSK2Q96PF2 358 aa12.45□□□□□ -0.42
PTPRE-204ENST00000455661 CMSS1Q9BQ75 279 aaKnown RBP12.45□□□□□ -0.42
PTPRE-204ENST00000455661 ULBP3Q9BZM4 244 aa12.45□□□□□ -0.42
PTPRE-204ENST00000455661 TREM1Q9NP99 234 aa12.45□□□□□ -0.42
PTPRE-204ENST00000455661 HEBP2Q9Y5Z4 205 aa12.45□□□□□ -0.42
PTPRE-204ENST00000455661 SNRNP200O75643 2136 aaKnown RBP12.45□□□□□ -0.42
PTPRE-204ENST00000455661 ELOA3DA6NLF2 546 aaPredicted RBP12.44□□□□□ -0.42
PTPRE-204ENST00000455661 BLOC1S5-TXNDC5H3BN57 136 aa12.44□□□□□ -0.42
PTPRE-204ENST00000455661 SULT2B1O00204 365 aa12.44□□□□□ -0.42
PTPRE-204ENST00000455661 GPR75O95800 540 aa12.44□□□□□ -0.42
PTPRE-204ENST00000455661 CRYBA1P05813 215 aa12.44□□□□□ -0.42
PTPRE-204ENST00000455661 FBXO45P0C2W1 286 aa12.44□□□□□ -0.42
PTPRE-204ENST00000455661 TPT1P13693 172 aaKnown RBP12.44□□□□□ -0.42
PTPRE-204ENST00000455661 PBX2P40425 430 aa12.44□□□□□ -0.42
PTPRE-204ENST00000455661 NR0B2Q15466 257 aa12.44□□□□□ -0.42
PTPRE-204ENST00000455661 ELOA3BQ3SY89 546 aa12.44□□□□□ -0.42
PTPRE-204ENST00000455661 BIVMQ86UB2 503 aa12.44□□□□□ -0.42
PTPRE-204ENST00000455661 SKA3Q8IX90 412 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms