RNA–Protein interactions for RNA: ENST00000455111.1

GPC1-206, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-206ENST00000455111 NARFLQ9H6Q4 476 aa13.73□□□□□ -0.21
GPC1-206ENST00000455111 EVA1AQ9H8M9 152 aa13.73□□□□□ -0.21
GPC1-206ENST00000455111 ZNF275Q9NSD4 429 aaPredicted RBP13.73□□□□□ -0.21
GPC1-206ENST00000455111 TMEFF2Q9UIK5 374 aaPredicted RBP13.73□□□□□ -0.21
GPC1-206ENST00000455111 TANC2Q9HCD6 1990 aa13.72□□□□□ -0.21
GPC1-206ENST00000455111 IGLV3-9A0A075B6K5 115 aa13.72□□□□□ -0.21
GPC1-206ENST00000455111 TRAPPC13A5PLN9 417 aa13.72□□□□□ -0.21
GPC1-206ENST00000455111 M0R233 179 aa13.72□□□□□ -0.21
GPC1-206ENST00000455111 EDF1O60869 148 aaKnown RBP13.72□□□□□ -0.21
GPC1-206ENST00000455111 SHOX2O60902 331 aaPredicted RBP13.72□□□□□ -0.21
GPC1-206ENST00000455111 QDPRP09417 244 aa13.72□□□□□ -0.21
GPC1-206ENST00000455111 FAM157BP0CG42 384 aa13.72□□□□□ -0.21
GPC1-206ENST00000455111 FUT1P19526 365 aa13.72□□□□□ -0.21
GPC1-206ENST00000455111 RBMXP38159 391 aaKnown RBP13.72□□□□□ -0.21
GPC1-206ENST00000455111 DVL1P1P54792 670 aaPredicted RBP13.72□□□□□ -0.21
GPC1-206ENST00000455111 LMO4P61968 165 aa13.72□□□□□ -0.21
GPC1-206ENST00000455111 VMACQ2NL98 169 aa13.72□□□□□ -0.21
GPC1-206ENST00000455111 TRMT5Q32P41 509 aaKnown RBP13.72□□□□□ -0.21
GPC1-206ENST00000455111 TTC33Q6PID6 262 aaPredicted RBP13.72□□□□□ -0.21
GPC1-206ENST00000455111 C1orf229Q6ZS94 237 aaPredicted RBP13.72□□□□□ -0.21
GPC1-206ENST00000455111 CCDC80Q76M96 950 aa13.72□□□□□ -0.21
GPC1-206ENST00000455111 PIWIL3Q7Z3Z3 882 aaKnown RBP13.72□□□□□ -0.21
GPC1-206ENST00000455111 OR4K5Q8NGD3 323 aa13.72□□□□□ -0.21
GPC1-206ENST00000455111 MOSPD2Q8NHP6 518 aa13.72□□□□□ -0.21
GPC1-206ENST00000455111 TMEM255BQ8WV15 326 aa13.72□□□□□ -0.21
GPC1-206ENST00000455111 MCHR2Q969V1 340 aa13.72□□□□□ -0.21
GPC1-206ENST00000455111 SLC25A44Q96H78 314 aaPredicted RBP13.72□□□□□ -0.21
GPC1-206ENST00000455111 B3GAT2Q9NPZ5 323 aa13.72□□□□□ -0.21
GPC1-206ENST00000455111 NANSQ9NR45 359 aa13.72□□□□□ -0.21
GPC1-206ENST00000455111 SELENONQ9NZV5 590 aa13.72□□□□□ -0.21
GPC1-206ENST00000455111 GMPR2Q9P2T1 348 aaKnown RBP13.72□□□□□ -0.21
GPC1-206ENST00000455111 ZNF229Q9UJW7 825 aa13.72□□□□□ -0.21
GPC1-206ENST00000455111 FBXO9Q9UK97 447 aaPredicted RBP13.72□□□□□ -0.21
GPC1-206ENST00000455111 SLC13A4Q9UKG4 626 aa13.72□□□□□ -0.21
GPC1-206ENST00000455111 UGT2A1Q9Y4X1 527 aa13.72□□□□□ -0.21
GPC1-206ENST00000455111 RNF13O43567 381 aa13.71□□□□□ -0.21
GPC1-206ENST00000455111 RAB36O95755 333 aa13.71□□□□□ -0.21
GPC1-206ENST00000455111 AVPP01185 164 aa13.71□□□□□ -0.21
GPC1-206ENST00000455111 F13BP05160 661 aa13.71□□□□□ -0.21
GPC1-206ENST00000455111 ITGA2P17301 1181 aa13.71□□□□□ -0.21
GPC1-206ENST00000455111 ZNF133P52736 654 aaPredicted RBP13.71□□□□□ -0.21
GPC1-206ENST00000455111 RPL18Q07020 188 aaKnown RBP13.71□□□□□ -0.21
GPC1-206ENST00000455111 NFYCQ13952 458 aa13.71□□□□□ -0.21
GPC1-206ENST00000455111 NANOGP8Q6NSW7 305 aa13.71□□□□□ -0.21
GPC1-206ENST00000455111 CGB2Q6NT52 195 aa13.71□□□□□ -0.21
GPC1-206ENST00000455111 CPEB3Q8NE35 698 aaKnown RBP13.71□□□□□ -0.21
GPC1-206ENST00000455111 ASB10Q8WXI3 467 aa13.71□□□□□ -0.21
GPC1-206ENST00000455111 ZNF566Q969W8 418 aa13.71□□□□□ -0.21
GPC1-206ENST00000455111 NABP1Q96AH0 204 aa13.71□□□□□ -0.21
GPC1-206ENST00000455111 MAGEB18Q96M61 343 aa13.71□□□□□ -0.21
GPC1-206ENST00000455111 OR51B6Q9H340 312 aa13.71□□□□□ -0.21
GPC1-206ENST00000455111 DENND2DQ9H6A0 471 aaPredicted RBP13.71□□□□□ -0.21
GPC1-206ENST00000455111 NANOGQ9H9S0 305 aa13.71□□□□□ -0.21
GPC1-206ENST00000455111 NPHS2Q9NP85 383 aa13.71□□□□□ -0.21
GPC1-206ENST00000455111 SLC7A8Q9UHI5 535 aa13.71□□□□□ -0.21
GPC1-206ENST00000455111 DUSP13Q9UII6 198 aa13.71□□□□□ -0.21
GPC1-206ENST00000455111 TRIM33Q9UPN9 1127 aa13.71□□□□□ -0.21
GPC1-206ENST00000455111 MGRN1O60291 552 aa13.7□□□□□ -0.22
GPC1-206ENST00000455111 PIP5K1CO60331 668 aa13.7□□□□□ -0.22
GPC1-206ENST00000455111 TRMUO75648 421 aaKnown RBP13.7□□□□□ -0.22
GPC1-206ENST00000455111 VENTXO95231 258 aa13.7□□□□□ -0.22
GPC1-206ENST00000455111 ZNF250P15622 560 aa13.7□□□□□ -0.22
GPC1-206ENST00000455111 ACHEP22303 614 aa13.7□□□□□ -0.22
GPC1-206ENST00000455111 AQP2P41181 271 aa13.7□□□□□ -0.22
GPC1-206ENST00000455111 FMODQ06828 376 aa13.7□□□□□ -0.22
GPC1-206ENST00000455111 ARMC4Q5T2S8 1044 aa13.7□□□□□ -0.22
GPC1-206ENST00000455111 DEF8Q6ZN54 512 aa13.7□□□□□ -0.22
GPC1-206ENST00000455111 RINLQ6ZS11 566 aa13.7□□□□□ -0.22
GPC1-206ENST00000455111 SLC30A7Q8NEW0 376 aa13.7□□□□□ -0.22
GPC1-206ENST00000455111 HDAC2Q92769 488 aaKnown RBP13.7□□□□□ -0.22
GPC1-206ENST00000455111 MS4A5Q9H3V2 200 aa13.7□□□□□ -0.22
GPC1-206ENST00000455111 LPAR2Q9HBW0 351 aa13.7□□□□□ -0.22
GPC1-206ENST00000455111 INTS9Q9NV88 658 aaKnown RBP13.7□□□□□ -0.22
GPC1-206ENST00000455111 TREM2Q9NZC2 230 aa13.7□□□□□ -0.22
GPC1-206ENST00000455111 CACNG2Q9Y698 323 aa13.7□□□□□ -0.22
GPC1-206ENST00000455111 TENM1Q9UKZ4 2725 aa13.7□□□□□ -0.22
GPC1-206ENST00000455111 VSTM5A8MXK1 200 aa13.69□□□□□ -0.22
GPC1-206ENST00000455111 ANGPT2O15123 496 aa13.69□□□□□ -0.22
GPC1-206ENST00000455111 SASH3O75995 380 aa13.69□□□□□ -0.22
GPC1-206ENST00000455111 SLC2A10O95528 541 aa13.69□□□□□ -0.22
GPC1-206ENST00000455111 OR8G3PP0DMU2 310 aa13.69□□□□□ -0.22
GPC1-206ENST00000455111 CDAP32320 146 aa13.69□□□□□ -0.22
GPC1-206ENST00000455111 GPR6P46095 362 aaPredicted RBP13.69□□□□□ -0.22
GPC1-206ENST00000455111 PIN1Q13526 163 aaPredicted RBP13.69□□□□□ -0.22
GPC1-206ENST00000455111 FHL1Q13642 323 aa13.69□□□□□ -0.22
GPC1-206ENST00000455111 SPRNQ5BIV9 151 aa13.69□□□□□ -0.22
GPC1-206ENST00000455111 GKAP1Q5VSY0 366 aaPredicted RBP13.69□□□□□ -0.22
GPC1-206ENST00000455111 PATL1Q86TB9 770 aaKnown RBP13.69□□□□□ -0.22
GPC1-206ENST00000455111 CLDN22Q8N7P3 220 aa13.69□□□□□ -0.22
GPC1-206ENST00000455111 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.69□□□□□ -0.22
GPC1-206ENST00000455111 SYT14Q8NB59 555 aa13.69□□□□□ -0.22
GPC1-206ENST00000455111 NOXO1Q8NFA2 376 aa13.69□□□□□ -0.22
GPC1-206ENST00000455111 SEMA6DQ8NFY4 1073 aa13.69□□□□□ -0.22
GPC1-206ENST00000455111 TSPEARQ8WU66 669 aa13.69□□□□□ -0.22
GPC1-206ENST00000455111 RDH5Q92781 318 aa13.69□□□□□ -0.22
GPC1-206ENST00000455111 MPP4Q96JB8 637 aa13.69□□□□□ -0.22
GPC1-206ENST00000455111 ZNF583Q96ND8 569 aa13.69□□□□□ -0.22
GPC1-206ENST00000455111 SLC19A3Q9BZV2 496 aa13.69□□□□□ -0.22
GPC1-206ENST00000455111 RABEP2Q9H5N1 569 aa13.69□□□□□ -0.22
GPC1-206ENST00000455111 TAAR3PQ9P1P4 343 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms