RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 OR13C2Q8NGS9 318 aa4.38□□□□□ -1.71
RIF1-207ENST00000454583 TMCO6Q96DC7 493 aa4.38□□□□□ -1.71
RIF1-207ENST00000454583 BPIFA2Q96DR5 249 aa4.38□□□□□ -1.71
RIF1-207ENST00000454583 NOX3Q9HBY0 568 aa4.38□□□□□ -1.71
RIF1-207ENST00000454583 B3GAT2Q9NPZ5 323 aa4.38□□□□□ -1.71
RIF1-207ENST00000454583 DDX28Q9NUL7 540 aaKnown RBP4.38□□□□□ -1.71
RIF1-207ENST00000454583 POLHQ9Y253 713 aa4.38□□□□□ -1.71
RIF1-207ENST00000454583 CAB39Q9Y376 341 aaPredicted RBP4.38□□□□□ -1.71
RIF1-207ENST00000454583 RBMX2Q9Y388 322 aaKnown RBP4.38□□□□□ -1.71
RIF1-207ENST00000454583 HDGFL3Q9Y3E1 203 aa4.38□□□□□ -1.71
RIF1-207ENST00000454583 RPL36Q9Y3U8 105 aaKnown RBP4.38□□□□□ -1.71
RIF1-207ENST00000454583 E9PI62 339 aa4.37□□□□□ -1.71
RIF1-207ENST00000454583 ERVH48-1M5A8F1 160 aa4.37□□□□□ -1.71
RIF1-207ENST00000454583 PIN1P1O15428 100 aa4.37□□□□□ -1.71
RIF1-207ENST00000454583 PLA2G10O15496 165 aa4.37□□□□□ -1.71
RIF1-207ENST00000454583 FAM20BO75063 409 aa4.37□□□□□ -1.71
RIF1-207ENST00000454583 SLC25A12O75746 678 aa4.37□□□□□ -1.71
RIF1-207ENST00000454583 SOX14O95416 240 aa4.37□□□□□ -1.71
RIF1-207ENST00000454583 CSTAP01040 98 aa4.37□□□□□ -1.71
RIF1-207ENST00000454583 TGM4P49221 684 aa4.37□□□□□ -1.71
RIF1-207ENST00000454583 ANXA11P50995 505 aaKnown RBP4.37□□□□□ -1.71
RIF1-207ENST00000454583 PRKAG1P54619 331 aa4.37□□□□□ -1.71
RIF1-207ENST00000454583 TMPRSS3P57727 454 aa4.37□□□□□ -1.71
RIF1-207ENST00000454583 ROM1Q03395 351 aa4.37□□□□□ -1.71
RIF1-207ENST00000454583 DBPQ10586 325 aaPredicted RBP4.37□□□□□ -1.71
RIF1-207ENST00000454583 ENDOGQ14249 297 aaKnown RBP4.37□□□□□ -1.71
RIF1-207ENST00000454583 ZNF169Q14929 603 aaPredicted RBP4.37□□□□□ -1.71
RIF1-207ENST00000454583 RPL13AP3Q6NVV1 102 aa4.37□□□□□ -1.71
RIF1-207ENST00000454583 MEPCEQ7L2J0 689 aaKnown RBP4.37□□□□□ -1.71
RIF1-207ENST00000454583 CADM3Q8N126 398 aa4.37□□□□□ -1.71
RIF1-207ENST00000454583 ATG16L2Q8NAA4 619 aa4.37□□□□□ -1.71
RIF1-207ENST00000454583 OSTF1Q92882 214 aa4.37□□□□□ -1.71
RIF1-207ENST00000454583 RELTQ969Z4 430 aa4.37□□□□□ -1.71
RIF1-207ENST00000454583 ABHD17AQ96GS6 310 aa4.37□□□□□ -1.71
RIF1-207ENST00000454583 AGAP4Q96P64 663 aa4.37□□□□□ -1.71
RIF1-207ENST00000454583 SLC30A2Q9BRI3 323 aa4.37□□□□□ -1.71
RIF1-207ENST00000454583 UTP23Q9BRU9 249 aaKnown RBP4.37□□□□□ -1.71
RIF1-207ENST00000454583 TRAF4Q9BUZ4 470 aaPredicted RBP4.37□□□□□ -1.71
RIF1-207ENST00000454583 OR52D1Q9H346 318 aa4.37□□□□□ -1.71
RIF1-207ENST00000454583 CALHM2Q9HA72 323 aa4.37□□□□□ -1.71
RIF1-207ENST00000454583 ZNF275Q9NSD4 429 aaPredicted RBP4.37□□□□□ -1.71
RIF1-207ENST00000454583 PLA2G3Q9NZ20 509 aa4.37□□□□□ -1.71
RIF1-207ENST00000454583 WARS2Q9UGM6 360 aaKnown RBP4.37□□□□□ -1.71
RIF1-207ENST00000454583 TP53TG5Q9Y2B4 290 aa4.37□□□□□ -1.71
RIF1-207ENST00000454583 EXOSC1Q9Y3B2 195 aaKnown RBP4.37□□□□□ -1.71
RIF1-207ENST00000454583 NOX1Q9Y5S8 564 aa4.37□□□□□ -1.71
RIF1-207ENST00000454583 OR14I1A6ND48 311 aa4.37□□□□□ -1.71
RIF1-207ENST00000454583 G3V3Q6 166 aa4.37□□□□□ -1.71
RIF1-207ENST00000454583 SSX4O60224 188 aa4.37□□□□□ -1.71
RIF1-207ENST00000454583 TGM6O95932 706 aa4.37□□□□□ -1.71
RIF1-207ENST00000454583 IL18BPO95998 194 aa4.37□□□□□ -1.71
RIF1-207ENST00000454583 ACTL6AO96019 429 aa4.37□□□□□ -1.71
RIF1-207ENST00000454583 IGLV1-44P01699 117 aa4.37□□□□□ -1.71
RIF1-207ENST00000454583 HRGP04196 525 aa4.37□□□□□ -1.71
RIF1-207ENST00000454583 EIF1P41567 113 aaKnown RBP4.37□□□□□ -1.71
RIF1-207ENST00000454583 KIR2DL2P43627 348 aaPredicted RBP4.37□□□□□ -1.71
RIF1-207ENST00000454583 CCR4P51679 360 aa4.37□□□□□ -1.71
RIF1-207ENST00000454583 FOXC1Q12948 553 aa4.37□□□□□ -1.71
RIF1-207ENST00000454583 LARS2Q15031 903 aaKnown RBP4.37□□□□□ -1.71
RIF1-207ENST00000454583 SPHARQ15513 63 aa4.37□□□□□ -1.71
RIF1-207ENST00000454583 PLEKHG7Q6ZR37 379 aa4.37□□□□□ -1.71
RIF1-207ENST00000454583 TMPPEQ6ZT21 453 aa4.37□□□□□ -1.71
RIF1-207ENST00000454583 RHOUQ7L0Q8 258 aa4.37□□□□□ -1.71
RIF1-207ENST00000454583 RDH10Q8IZV5 341 aa4.37□□□□□ -1.71
RIF1-207ENST00000454583 OR6V1Q8N148 313 aa4.37□□□□□ -1.71
RIF1-207ENST00000454583 TMEM99Q8N816 258 aa4.37□□□□□ -1.71
RIF1-207ENST00000454583 OR6X1Q8NH79 312 aa4.37□□□□□ -1.71
RIF1-207ENST00000454583 TXNDC15Q96J42 360 aa4.37□□□□□ -1.71
RIF1-207ENST00000454583 TNFRSF13CQ96RJ3 184 aa4.37□□□□□ -1.71
RIF1-207ENST00000454583 COQ7Q99807 217 aa4.37□□□□□ -1.71
RIF1-207ENST00000454583 DCSTAMPQ9H295 470 aa4.37□□□□□ -1.71
RIF1-207ENST00000454583 PLSCR4Q9NRQ2 329 aa4.37□□□□□ -1.71
RIF1-207ENST00000454583 LRFN1Q9P244 771 aa4.37□□□□□ -1.71
RIF1-207ENST00000454583 COPS3Q9UNS2 423 aa4.37□□□□□ -1.71
RIF1-207ENST00000454583 FREM1Q5H8C1 2179 aa4.37□□□□□ -1.71
RIF1-207ENST00000454583 SPTBN4Q9H254 2564 aa4.37□□□□□ -1.71
RIF1-207ENST00000454583 TRAV1-2A0A0B4J238 106 aa4.37□□□□□ -1.71
RIF1-207ENST00000454583 SLC22A23A1A5C7 686 aa4.37□□□□□ -1.71
RIF1-207ENST00000454583 UNC119BA6NIH7 251 aa4.37□□□□□ -1.71
RIF1-207ENST00000454583 ARGFXA6NJG6 315 aa4.37□□□□□ -1.71
RIF1-207ENST00000454583 CLDN25C9JDP6 229 aa4.37□□□□□ -1.71
RIF1-207ENST00000454583 LDLRAD4O15165 306 aa4.37□□□□□ -1.71
RIF1-207ENST00000454583 TMEM127O75204 238 aa4.37□□□□□ -1.71
RIF1-207ENST00000454583 RNF224P0DH78 156 aa4.37□□□□□ -1.71
RIF1-207ENST00000454583 POU2F1P14859 743 aa4.37□□□□□ -1.71
RIF1-207ENST00000454583 HIST1H1CP16403 213 aaKnown RBP4.37□□□□□ -1.71
RIF1-207ENST00000454583 IGFBP3P17936 291 aaPredicted RBP4.37□□□□□ -1.71
RIF1-207ENST00000454583 APEX1P27695 318 aaKnown RBP4.37□□□□□ -1.71
RIF1-207ENST00000454583 SDHAP31040 664 aa4.37□□□□□ -1.71
RIF1-207ENST00000454583 OTX2P32243 289 aa4.37□□□□□ -1.71
RIF1-207ENST00000454583 CYB561P49447 251 aa4.37□□□□□ -1.71
RIF1-207ENST00000454583 RAC3P60763 192 aa4.37□□□□□ -1.71
RIF1-207ENST00000454583 CDC42P60953 191 aa4.37□□□□□ -1.71
RIF1-207ENST00000454583 ZNF45Q02386 682 aa4.37□□□□□ -1.71
RIF1-207ENST00000454583 CD300CQ08708 224 aa4.37□□□□□ -1.71
RIF1-207ENST00000454583 ZNF846Q147U1 533 aa4.37□□□□□ -1.71
RIF1-207ENST00000454583 ZNF404Q494X3 552 aa4.37□□□□□ -1.71
RIF1-207ENST00000454583 SLC36A2Q495M3 483 aa4.37□□□□□ -1.71
RIF1-207ENST00000454583 PRR30Q53SZ7 412 aaPredicted RBP4.37□□□□□ -1.71
RIF1-207ENST00000454583 ALG10BQ5I7T1 473 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms