RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 A0A1W2PPR1 153 aa24.48■■□□□ 1.51
SMARCC1-203ENST00000454240 A0A1W2PPZ6 126 aa24.48■■□□□ 1.51
SMARCC1-203ENST00000454240 ARRDC5A6NEK1 342 aa24.48■■□□□ 1.51
SMARCC1-203ENST00000454240 DHHO43323 396 aa24.48■■□□□ 1.51
SMARCC1-203ENST00000454240 TACC2O95359 2948 aa24.48■■□□□ 1.51
SMARCC1-203ENST00000454240 NR1H2P55055 460 aa24.48■■□□□ 1.51
SMARCC1-203ENST00000454240 ACTR3P61158 418 aa24.48■■□□□ 1.51
SMARCC1-203ENST00000454240 FBXW10Q5XX13 1052 aa24.48■■□□□ 1.51
SMARCC1-203ENST00000454240 GPR139Q6DWJ6 353 aa24.48■■□□□ 1.51
SMARCC1-203ENST00000454240 ZNF620Q6ZNG0 422 aa24.48■■□□□ 1.51
SMARCC1-203ENST00000454240 CDC20BQ86Y33 519 aa24.48■■□□□ 1.51
SMARCC1-203ENST00000454240 HS3ST6Q96QI5 342 aa24.48■■□□□ 1.51
SMARCC1-203ENST00000454240 FOXB1Q99853 325 aa24.48■■□□□ 1.51
SMARCC1-203ENST00000454240 NTN4Q9HB63 628 aa24.48■■□□□ 1.51
SMARCC1-203ENST00000454240 AP4S1Q9Y587 144 aa24.48■■□□□ 1.51
SMARCC1-203ENST00000454240 DEAF1O75398 565 aaPredicted RBP24.47■■□□□ 1.51
SMARCC1-203ENST00000454240 APEHP13798 732 aaKnown RBP24.47■■□□□ 1.51
SMARCC1-203ENST00000454240 SDHAP31040 664 aa24.47■■□□□ 1.51
SMARCC1-203ENST00000454240 MYBPC1Q00872 1141 aa24.47■■□□□ 1.51
SMARCC1-203ENST00000454240 NCMAPQ5T1S8 102 aa24.47■■□□□ 1.51
SMARCC1-203ENST00000454240 KLHL24Q6TFL4 600 aa24.47■■□□□ 1.51
SMARCC1-203ENST00000454240 SAMD8Q96LT4 415 aa24.47■■□□□ 1.51
SMARCC1-203ENST00000454240 ZNF570Q96NI8 536 aa24.47■■□□□ 1.51
SMARCC1-203ENST00000454240 SMURF2Q9HAU4 748 aa24.47■■□□□ 1.51
SMARCC1-203ENST00000454240 IER3IP1Q9Y5U9 82 aa24.47■■□□□ 1.51
SMARCC1-203ENST00000454240 DPRXA6NFQ7 191 aa24.46■■□□□ 1.51
SMARCC1-203ENST00000454240 ARHGEF9O43307 516 aa24.46■■□□□ 1.51
SMARCC1-203ENST00000454240 SEC14L2O76054 403 aa24.46■■□□□ 1.51
SMARCC1-203ENST00000454240 TXNDC12O95881 172 aa24.46■■□□□ 1.51
SMARCC1-203ENST00000454240 WNT11O96014 354 aa24.46■■□□□ 1.51
SMARCC1-203ENST00000454240 SLC6A6P31641 620 aa24.46■■□□□ 1.51
SMARCC1-203ENST00000454240 RPS6KA3P51812 740 aa24.46■■□□□ 1.51
SMARCC1-203ENST00000454240 UBE2NP61088 152 aaKnown RBP24.46■■□□□ 1.51
SMARCC1-203ENST00000454240 MESTQ5EB52 335 aa24.46■■□□□ 1.51
SMARCC1-203ENST00000454240 THEM4Q5T1C6 240 aa24.46■■□□□ 1.51
SMARCC1-203ENST00000454240 C10orf128Q5T292 105 aa24.46■■□□□ 1.51
SMARCC1-203ENST00000454240 RASSF6Q6ZTQ3 369 aa24.46■■□□□ 1.51
SMARCC1-203ENST00000454240 CLDN22Q8N7P3 220 aa24.46■■□□□ 1.51
SMARCC1-203ENST00000454240 FNDC8Q8TC99 324 aa24.46■■□□□ 1.51
SMARCC1-203ENST00000454240 GTPBP3Q969Y2 492 aaKnown RBP24.46■■□□□ 1.51
SMARCC1-203ENST00000454240 LURAP1Q96LR2 239 aa24.46■■□□□ 1.51
SMARCC1-203ENST00000454240 FEVQ99581 238 aa24.46■■□□□ 1.51
SMARCC1-203ENST00000454240 TMEM204Q9BSN7 226 aa24.46■■□□□ 1.51
SMARCC1-203ENST00000454240 ESRP2Q9H6T0 727 aaKnown RBP24.46■■□□□ 1.51
SMARCC1-203ENST00000454240 IL20Q9NYY1 176 aa24.46■■□□□ 1.51
SMARCC1-203ENST00000454240 PDP1Q9P0J1 537 aaPredicted RBP24.46■■□□□ 1.51
SMARCC1-203ENST00000454240 MAGED1Q9Y5V3 778 aaPredicted RBP24.46■■□□□ 1.51
SMARCC1-203ENST00000454240 TEX13CA0A0J9YWL9 993 aa24.45■■□□□ 1.5
SMARCC1-203ENST00000454240 E2F6O75461 281 aa24.45■■□□□ 1.5
SMARCC1-203ENST00000454240 NR2C1P13056 603 aa24.45■■□□□ 1.5
SMARCC1-203ENST00000454240 GSTM3P21266 225 aa24.45■■□□□ 1.5
SMARCC1-203ENST00000454240 PAX7P23759 505 aa24.45■■□□□ 1.5
SMARCC1-203ENST00000454240 CD47Q08722 323 aa24.45■■□□□ 1.5
SMARCC1-203ENST00000454240 KPNB1Q14974 876 aaKnown RBP24.45■■□□□ 1.5
SMARCC1-203ENST00000454240 RPL13AP3Q6NVV1 102 aa24.45■■□□□ 1.5
SMARCC1-203ENST00000454240 SLC25A47Q6Q0C1 308 aa24.45■■□□□ 1.5
SMARCC1-203ENST00000454240 CD300LDQ6UXZ3 194 aa24.45■■□□□ 1.5
SMARCC1-203ENST00000454240 ZNF813Q6ZN06 617 aa24.45■■□□□ 1.5
SMARCC1-203ENST00000454240 CCDC36Q8IYA8 594 aa24.45■■□□□ 1.5
SMARCC1-203ENST00000454240 RASD2Q96D21 266 aa24.45■■□□□ 1.5
SMARCC1-203ENST00000454240 RBP7Q96R05 134 aa24.45■■□□□ 1.5
SMARCC1-203ENST00000454240 NIPSNAP1Q9BPW8 284 aa24.45■■□□□ 1.5
SMARCC1-203ENST00000454240 HEATR1Q9H583 2144 aaKnown RBP24.45■■□□□ 1.5
SMARCC1-203ENST00000454240 EGLN3Q9H6Z9 239 aa24.45■■□□□ 1.5
SMARCC1-203ENST00000454240 PLEKHF2Q9H8W4 249 aa24.45■■□□□ 1.5
SMARCC1-203ENST00000454240 CDH10Q9Y6N8 788 aa24.45■■□□□ 1.5
SMARCC1-203ENST00000454240 IGKV1D-43A0A0B4J1Z2 117 aa24.44■■□□□ 1.5
SMARCC1-203ENST00000454240 IMPA2O14732 288 aa24.44■■□□□ 1.5
SMARCC1-203ENST00000454240 ARPC3O15145 178 aa24.44■■□□□ 1.5
SMARCC1-203ENST00000454240 AHCYL1O43865 530 aa24.44■■□□□ 1.5
SMARCC1-203ENST00000454240 SLC2A10O95528 541 aa24.44■■□□□ 1.5
SMARCC1-203ENST00000454240 PPP1R3DO95685 299 aa24.44■■□□□ 1.5
SMARCC1-203ENST00000454240 B4GALT1P15291 398 aa24.44■■□□□ 1.5
SMARCC1-203ENST00000454240 ZNF83P51522 516 aa24.44■■□□□ 1.5
SMARCC1-203ENST00000454240 GABPB1Q06547 395 aaPredicted RBP24.44■■□□□ 1.5
SMARCC1-203ENST00000454240 FMODQ06828 376 aa24.44■■□□□ 1.5
SMARCC1-203ENST00000454240 COX10Q12887 443 aa24.44■■□□□ 1.5
SMARCC1-203ENST00000454240 ATP6AP1Q15904 470 aa24.44■■□□□ 1.5
SMARCC1-203ENST00000454240 HS3ST5Q8IZT8 346 aa24.44■■□□□ 1.5
SMARCC1-203ENST00000454240 NRBF2Q96F24 287 aa24.44■■□□□ 1.5
SMARCC1-203ENST00000454240 RAB3IPQ96QF0 476 aaPredicted RBP24.44■■□□□ 1.5
SMARCC1-203ENST00000454240 C1QTNF6Q9BXI9 259 aa24.44■■□□□ 1.5
SMARCC1-203ENST00000454240 TMEM38BQ9NVV0 291 aa24.44■■□□□ 1.5
SMARCC1-203ENST00000454240 XKRYO14609 159 aa24.43■■□□□ 1.5
SMARCC1-203ENST00000454240 FASP25445 335 aa24.43■■□□□ 1.5
SMARCC1-203ENST00000454240 ZNF84P51523 738 aa24.43■■□□□ 1.5
SMARCC1-203ENST00000454240 BSPH1Q075Z2 132 aa24.43■■□□□ 1.5
SMARCC1-203ENST00000454240 KRR1Q13601 381 aaKnown RBP24.43■■□□□ 1.5
SMARCC1-203ENST00000454240 KLHL17Q6TDP4 642 aa24.43■■□□□ 1.5
SMARCC1-203ENST00000454240 ERMAPQ96PL5 475 aaPredicted RBP24.43■■□□□ 1.5
SMARCC1-203ENST00000454240 IFT27Q9BW83 186 aa24.43■■□□□ 1.5
SMARCC1-203ENST00000454240 CADP27708 2225 aa24.43■■□□□ 1.5
SMARCC1-203ENST00000454240 LRBAP50851 2863 aa24.42■■□□□ 1.5
SMARCC1-203ENST00000454240 CSMD2Q7Z408 3487 aa24.42■■□□□ 1.5
SMARCC1-203ENST00000454240 RAI1Q7Z5J4 1906 aaPredicted RBP24.42■■□□□ 1.5
SMARCC1-203ENST00000454240 SLC22A23A1A5C7 686 aa24.42■■□□□ 1.5
SMARCC1-203ENST00000454240 PRSS37A4D1T9 235 aa24.42■■□□□ 1.5
SMARCC1-203ENST00000454240 ZNF503-AS2A6NEH8 195 aa24.42■■□□□ 1.5
SMARCC1-203ENST00000454240 H7C1C5 153 aa24.42■■□□□ 1.5
SMARCC1-203ENST00000454240 SOCS2O14508 198 aa24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms