RNA–Protein interactions for RNA: ENST00000453744.6

UBE2D3-210, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 3,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-210ENST00000453744 SFTPBP07988 381 aa12.65□□□□□ -0.38
UBE2D3-210ENST00000453744 RD3LP0DJH9 198 aa12.65□□□□□ -0.38
UBE2D3-210ENST00000453744 CPN1P15169 458 aa12.65□□□□□ -0.38
UBE2D3-210ENST00000453744 PDZK1IP1Q13113 114 aa12.65□□□□□ -0.38
UBE2D3-210ENST00000453744 EID2Q8N6I1 236 aa12.65□□□□□ -0.38
UBE2D3-210ENST00000453744 SLC22A18Q96BI1 424 aa12.65□□□□□ -0.38
UBE2D3-210ENST00000453744 PARP12Q9H0J9 701 aaKnown RBP12.65□□□□□ -0.38
UBE2D3-210ENST00000453744 CERS4Q9HA82 394 aa12.65□□□□□ -0.38
UBE2D3-210ENST00000453744 C19orf53Q9UNZ5 99 aaPredicted RBP12.65□□□□□ -0.38
UBE2D3-210ENST00000453744 H7C417 338 aa12.65□□□□□ -0.38
UBE2D3-210ENST00000453744 ZNF208O43345 1280 aa12.65□□□□□ -0.38
UBE2D3-210ENST00000453744 CALCBP10092 127 aa12.65□□□□□ -0.38
UBE2D3-210ENST00000453744 DPP4P27487 766 aa12.65□□□□□ -0.38
UBE2D3-210ENST00000453744 FZD5Q13467 585 aa12.65□□□□□ -0.38
UBE2D3-210ENST00000453744 ZNF77Q15935 545 aa12.65□□□□□ -0.38
UBE2D3-210ENST00000453744 TAF8Q7Z7C8 310 aa12.65□□□□□ -0.38
UBE2D3-210ENST00000453744 PRR22Q8IZ63 422 aa12.65□□□□□ -0.38
UBE2D3-210ENST00000453744 CCL4L1Q8NHW4 92 aa12.65□□□□□ -0.38
UBE2D3-210ENST00000453744 ZNRF4Q8WWF5 429 aa12.65□□□□□ -0.38
UBE2D3-210ENST00000453744 SLC25A44Q96H78 314 aaPredicted RBP12.65□□□□□ -0.38
UBE2D3-210ENST00000453744 UQCC2Q9BRT2 126 aa12.65□□□□□ -0.38
UBE2D3-210ENST00000453744 IGFLR1Q9H665 355 aa12.65□□□□□ -0.38
UBE2D3-210ENST00000453744 MTFP1Q9UDX5 166 aa12.65□□□□□ -0.38
UBE2D3-210ENST00000453744 CYB5R1Q9UHQ9 305 aa12.65□□□□□ -0.38
UBE2D3-210ENST00000453744 FBXL21Q9UKT6 434 aa12.65□□□□□ -0.38
UBE2D3-210ENST00000453744 H0YGG7 62 aa12.64□□□□□ -0.39
UBE2D3-210ENST00000453744 FBXO24O75426 580 aa12.64□□□□□ -0.39
UBE2D3-210ENST00000453744 GLCEO94923 617 aa12.64□□□□□ -0.39
UBE2D3-210ENST00000453744 BDKRB2P30411 391 aa12.64□□□□□ -0.39
UBE2D3-210ENST00000453744 ARF3P61204 181 aaPredicted RBP12.64□□□□□ -0.39
UBE2D3-210ENST00000453744 MEP1BQ16820 701 aa12.64□□□□□ -0.39
UBE2D3-210ENST00000453744 CSNK1A1LQ8N752 337 aa12.64□□□□□ -0.39
UBE2D3-210ENST00000453744 OR1J4Q8NGS1 313 aa12.64□□□□□ -0.39
UBE2D3-210ENST00000453744 OR9A4Q8NGU2 314 aa12.64□□□□□ -0.39
UBE2D3-210ENST00000453744 STK35Q8TDR2 534 aa12.64□□□□□ -0.39
UBE2D3-210ENST00000453744 SLC25A32Q9H2D1 315 aa12.64□□□□□ -0.39
UBE2D3-210ENST00000453744 LRIT1Q9P2V4 623 aa12.64□□□□□ -0.39
UBE2D3-210ENST00000453744 TMEM200CA6NKL6 621 aa12.64□□□□□ -0.39
UBE2D3-210ENST00000453744 MGMTP16455 207 aa12.64□□□□□ -0.39
UBE2D3-210ENST00000453744 SNRPNP63162 240 aaKnown RBP12.64□□□□□ -0.39
UBE2D3-210ENST00000453744 MAT1AQ00266 395 aaKnown RBP12.64□□□□□ -0.39
UBE2D3-210ENST00000453744 MANEAQ5SRI9 462 aa12.64□□□□□ -0.39
UBE2D3-210ENST00000453744 ADAMTSL4Q6UY14 1074 aa12.64□□□□□ -0.39
UBE2D3-210ENST00000453744 PPP1R14AQ96A00 147 aa12.64□□□□□ -0.39
UBE2D3-210ENST00000453744 OR2M4Q96R27 311 aa12.64□□□□□ -0.39
UBE2D3-210ENST00000453744 GPER1Q99527 375 aa12.64□□□□□ -0.39
UBE2D3-210ENST00000453744 SCPEP1Q9HB40 452 aa12.64□□□□□ -0.39
UBE2D3-210ENST00000453744 KCNE5Q9UJ90 142 aa12.64□□□□□ -0.39
UBE2D3-210ENST00000453744 CES1P1Q9UKY3 287 aa12.64□□□□□ -0.39
UBE2D3-210ENST00000453744 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.64□□□□□ -0.39
UBE2D3-210ENST00000453744 METTL21EPA6NDL7 271 aa12.64□□□□□ -0.39
UBE2D3-210ENST00000453744 CTDSPLO15194 276 aa12.64□□□□□ -0.39
UBE2D3-210ENST00000453744 NAT2P11245 290 aa12.64□□□□□ -0.39
UBE2D3-210ENST00000453744 CXCR1P25024 350 aa12.64□□□□□ -0.39
UBE2D3-210ENST00000453744 ATP1B3P54709 279 aa12.64□□□□□ -0.39
UBE2D3-210ENST00000453744 HTRA4P83105 476 aaPredicted RBP12.64□□□□□ -0.39
UBE2D3-210ENST00000453744 ARFRP1Q13795 201 aa12.64□□□□□ -0.39
UBE2D3-210ENST00000453744 SMAD2Q15796 467 aaKnown RBP12.64□□□□□ -0.39
UBE2D3-210ENST00000453744 TMEM31Q5JXX7 168 aa12.64□□□□□ -0.39
UBE2D3-210ENST00000453744 LHX8Q68G74 356 aa12.64□□□□□ -0.39
UBE2D3-210ENST00000453744 NAXDQ8IW45 347 aa12.64□□□□□ -0.39
UBE2D3-210ENST00000453744 PM20D2Q8IYS1 436 aa12.64□□□□□ -0.39
UBE2D3-210ENST00000453744 OR14A16Q8NHC5 309 aa12.64□□□□□ -0.39
UBE2D3-210ENST00000453744 GIMAP5Q96F15 307 aa12.64□□□□□ -0.39
UBE2D3-210ENST00000453744 TMEM41AQ96HV5 264 aa12.64□□□□□ -0.39
UBE2D3-210ENST00000453744 INTS14Q96SY0 518 aa12.64□□□□□ -0.39
UBE2D3-210ENST00000453744 USB1Q9BQ65 265 aaKnown RBP12.64□□□□□ -0.39
UBE2D3-210ENST00000453744 SLC17A9Q9BYT1 436 aa12.64□□□□□ -0.39
UBE2D3-210ENST00000453744 REG4Q9BYZ8 158 aa12.64□□□□□ -0.39
UBE2D3-210ENST00000453744 ZNF223Q9UK11 482 aaPredicted RBP12.64□□□□□ -0.39
UBE2D3-210ENST00000453744 MRPS33Q9Y291 106 aaKnown RBP12.64□□□□□ -0.39
UBE2D3-210ENST00000453744 MRPS2Q9Y399 296 aaKnown RBP12.64□□□□□ -0.39
UBE2D3-210ENST00000453744 ZNF337Q9Y3M9 751 aa12.64□□□□□ -0.39
UBE2D3-210ENST00000453744 BRWD1Q9NSI6 2320 aa12.64□□□□□ -0.39
UBE2D3-210ENST00000453744 RFPL4AA6NLU0 287 aa12.63□□□□□ -0.39
UBE2D3-210ENST00000453744 HMSDA8MTL9 139 aa12.63□□□□□ -0.39
UBE2D3-210ENST00000453744 RFPL4AL1F8VTS6 287 aa12.63□□□□□ -0.39
UBE2D3-210ENST00000453744 KLF4O43474 513 aa12.63□□□□□ -0.39
UBE2D3-210ENST00000453744 GALR3O60755 368 aaPredicted RBP12.63□□□□□ -0.39
UBE2D3-210ENST00000453744 CT62P0C5K7 136 aa12.63□□□□□ -0.39
UBE2D3-210ENST00000453744 PGAM2P15259 253 aa12.63□□□□□ -0.39
UBE2D3-210ENST00000453744 ZNF14P17017 642 aaPredicted RBP12.63□□□□□ -0.39
UBE2D3-210ENST00000453744 GPR18Q14330 331 aa12.63□□□□□ -0.39
UBE2D3-210ENST00000453744 SLC9A3R2Q15599 337 aa12.63□□□□□ -0.39
UBE2D3-210ENST00000453744 GUCA2BQ16661 112 aa12.63□□□□□ -0.39
UBE2D3-210ENST00000453744 SHISA5Q8N114 240 aa12.63□□□□□ -0.39
UBE2D3-210ENST00000453744 TEX19Q8NA77 164 aa12.63□□□□□ -0.39
UBE2D3-210ENST00000453744 FOXRED1Q96CU9 486 aaPredicted RBP12.63□□□□□ -0.39
UBE2D3-210ENST00000453744 DGAT2Q96PD7 388 aa12.63□□□□□ -0.39
UBE2D3-210ENST00000453744 PHB2Q99623 299 aa12.63□□□□□ -0.39
UBE2D3-210ENST00000453744 TIMP4Q99727 224 aa12.63□□□□□ -0.39
UBE2D3-210ENST00000453744 IFT22Q9H7X7 185 aa12.63□□□□□ -0.39
UBE2D3-210ENST00000453744 PNO1Q9NRX1 252 aaKnown RBP12.63□□□□□ -0.39
UBE2D3-210ENST00000453744 ZNF629Q9UEG4 869 aaPredicted RBP12.63□□□□□ -0.39
UBE2D3-210ENST00000453744 TBC1D29Q9UFV1 150 aa12.63□□□□□ -0.39
UBE2D3-210ENST00000453744 PLXNA3P51805 1871 aa12.63□□□□□ -0.39
UBE2D3-210ENST00000453744 LAMA2P24043 3122 aaKnown RBP12.63□□□□□ -0.39
UBE2D3-210ENST00000453744 A0A0A6YYC8 382 aaPredicted RBP12.63□□□□□ -0.39
UBE2D3-210ENST00000453744 I3L1I5 382 aaPredicted RBP12.63□□□□□ -0.39
UBE2D3-210ENST00000453744 XRCC3O43542 346 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms