RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 HDDC2Q7Z4H3 204 aa11.13□□□□□ -0.63
CHD3-206ENST00000452447 SKA3Q8IX90 412 aa11.13□□□□□ -0.63
CHD3-206ENST00000452447 SLC22A24Q8N4F4 322 aa11.13□□□□□ -0.63
CHD3-206ENST00000452447 PFN4Q8NHR9 129 aa11.13□□□□□ -0.63
CHD3-206ENST00000452447 TMEM255BQ8WV15 326 aa11.13□□□□□ -0.63
CHD3-206ENST00000452447 TMEM239Q8WW34 195 aa11.13□□□□□ -0.63
CHD3-206ENST00000452447 SGTBQ96EQ0 304 aa11.13□□□□□ -0.63
CHD3-206ENST00000452447 TMEM38BQ9NVV0 291 aa11.13□□□□□ -0.63
CHD3-206ENST00000452447 ZNF224Q9NZL3 707 aa11.13□□□□□ -0.63
CHD3-206ENST00000452447 CDC42EP3Q9UKI2 254 aa11.13□□□□□ -0.63
CHD3-206ENST00000452447 MED31Q9Y3C7 131 aa11.13□□□□□ -0.63
CHD3-206ENST00000452447 FBN1P35555 2871 aaKnown RBP11.13□□□□□ -0.63
CHD3-206ENST00000452447 TMEM129A0AVI4 362 aa11.12□□□□□ -0.63
CHD3-206ENST00000452447 ELOVL7A1L3X0 281 aa11.12□□□□□ -0.63
CHD3-206ENST00000452447 SLC22A2O15244 555 aa11.12□□□□□ -0.63
CHD3-206ENST00000452447 OR7A10O76100 309 aa11.12□□□□□ -0.63
CHD3-206ENST00000452447 IGF2P01344 180 aa11.12□□□□□ -0.63
CHD3-206ENST00000452447 SERPINA5P05154 406 aa11.12□□□□□ -0.63
CHD3-206ENST00000452447 PATE4P0C8F1 98 aa11.12□□□□□ -0.63
CHD3-206ENST00000452447 PGA4P0DJD7 388 aa11.12□□□□□ -0.63
CHD3-206ENST00000452447 PGA3P0DJD8 388 aa11.12□□□□□ -0.63
CHD3-206ENST00000452447 IGHV4-31P0DP07 118 aa11.12□□□□□ -0.63
CHD3-206ENST00000452447 THRBP10828 461 aa11.12□□□□□ -0.63
CHD3-206ENST00000452447 APEHP13798 732 aaKnown RBP11.12□□□□□ -0.63
CHD3-206ENST00000452447 DAOP14920 347 aa11.12□□□□□ -0.63
CHD3-206ENST00000452447 GLRXP35754 106 aa11.12□□□□□ -0.63
CHD3-206ENST00000452447 ZNF84P51523 738 aa11.12□□□□□ -0.63
CHD3-206ENST00000452447 UGT2B15P54855 530 aa11.12□□□□□ -0.63
CHD3-206ENST00000452447 RPS23P62266 143 aaKnown RBP11.12□□□□□ -0.63
CHD3-206ENST00000452447 RAB39AQ14964 217 aa11.12□□□□□ -0.63
CHD3-206ENST00000452447 CDK20Q8IZL9 346 aa11.12□□□□□ -0.63
CHD3-206ENST00000452447 ZCCHC24Q8N2G6 241 aaKnown RBP11.12□□□□□ -0.63
CHD3-206ENST00000452447 RP9Q8TA86 221 aaKnown RBP11.12□□□□□ -0.63
CHD3-206ENST00000452447 LZICQ8WZA0 190 aa11.12□□□□□ -0.63
CHD3-206ENST00000452447 MRPL24Q96A35 216 aaKnown RBP11.12□□□□□ -0.63
CHD3-206ENST00000452447 ZNF75AQ96N20 296 aa11.12□□□□□ -0.63
CHD3-206ENST00000452447 BEX2Q9BXY8 128 aa11.12□□□□□ -0.63
CHD3-206ENST00000452447 BPESC1Q9GZL8 116 aa11.12□□□□□ -0.63
CHD3-206ENST00000452447 RNF121Q9H920 327 aa11.12□□□□□ -0.63
CHD3-206ENST00000452447 ARMCX1Q9P291 453 aa11.12□□□□□ -0.63
CHD3-206ENST00000452447 STX18Q9P2W9 335 aaKnown RBP11.12□□□□□ -0.63
CHD3-206ENST00000452447 AP3M1Q9Y2T2 418 aa11.12□□□□□ -0.63
CHD3-206ENST00000452447 STAB1Q9NY15 2570 aa11.12□□□□□ -0.63
CHD3-206ENST00000452447 ADRA2AP08913 450 aa11.11□□□□□ -0.63
CHD3-206ENST00000452447 ZNF16P17020 682 aaPredicted RBP11.11□□□□□ -0.63
CHD3-206ENST00000452447 MDH1P40925 334 aaKnown RBP11.11□□□□□ -0.63
CHD3-206ENST00000452447 AQP2P41181 271 aa11.11□□□□□ -0.63
CHD3-206ENST00000452447 EVX1P49640 407 aa11.11□□□□□ -0.63
CHD3-206ENST00000452447 DAP3P51398 398 aaKnown RBP11.11□□□□□ -0.63
CHD3-206ENST00000452447 SELENOWP63302 87 aa11.11□□□□□ -0.63
CHD3-206ENST00000452447 ST3GAL3Q11203 375 aa11.11□□□□□ -0.63
CHD3-206ENST00000452447 SLC36A2Q495M3 483 aa11.11□□□□□ -0.63
CHD3-206ENST00000452447 SLC16A14Q7RTX9 510 aa11.11□□□□□ -0.63
CHD3-206ENST00000452447 ARPINQ7Z6K5 226 aa11.11□□□□□ -0.63
CHD3-206ENST00000452447 DPPA2Q7Z7J5 298 aa11.11□□□□□ -0.63
CHD3-206ENST00000452447 MICU2Q8IYU8 434 aa11.11□□□□□ -0.63
CHD3-206ENST00000452447 POU5F2Q8N7G0 328 aa11.11□□□□□ -0.63
CHD3-206ENST00000452447 SYT14Q8NB59 555 aa11.11□□□□□ -0.63
CHD3-206ENST00000452447 OR4K5Q8NGD3 323 aa11.11□□□□□ -0.63
CHD3-206ENST00000452447 MCHR2Q969V1 340 aa11.11□□□□□ -0.63
CHD3-206ENST00000452447 RCN3Q96D15 328 aa11.11□□□□□ -0.63
CHD3-206ENST00000452447 ZNF347Q96SE7 839 aa11.11□□□□□ -0.63
CHD3-206ENST00000452447 SH3GL3Q99963 347 aa11.11□□□□□ -0.63
CHD3-206ENST00000452447 MRPL37Q9BZE1 423 aaKnown RBP11.11□□□□□ -0.63
CHD3-206ENST00000452447 CCDC134Q9H6E4 229 aa11.11□□□□□ -0.63
CHD3-206ENST00000452447 INIPQ9NRY2 104 aa11.11□□□□□ -0.63
CHD3-206ENST00000452447 C20orf141Q9NUB4 165 aa11.11□□□□□ -0.63
CHD3-206ENST00000452447 TMEM160Q9NX00 188 aa11.11□□□□□ -0.63
CHD3-206ENST00000452447 IGHV4-61A0A0C4DH41 118 aa11.11□□□□□ -0.63
CHD3-206ENST00000452447 LOC100289279A0A1B0GTE1 492 aa11.11□□□□□ -0.63
CHD3-206ENST00000452447 CENPBD1B2RD01 187 aa11.11□□□□□ -0.63
CHD3-206ENST00000452447 M0R233 179 aa11.11□□□□□ -0.63
CHD3-206ENST00000452447 SYNGR3O43761 229 aa11.11□□□□□ -0.63
CHD3-206ENST00000452447 LMX1BO60663 402 aa11.11□□□□□ -0.63
CHD3-206ENST00000452447 STAMBPO95630 424 aa11.11□□□□□ -0.63
CHD3-206ENST00000452447 FAM157CP0CG43 387 aa11.11□□□□□ -0.63
CHD3-206ENST00000452447 MYBPC1Q00872 1141 aa11.11□□□□□ -0.63
CHD3-206ENST00000452447 FAM166AQ6J272 317 aa11.11□□□□□ -0.63
CHD3-206ENST00000452447 TMEM53Q6P2H8 277 aa11.11□□□□□ -0.63
CHD3-206ENST00000452447 NOXO1Q8NFA2 376 aa11.11□□□□□ -0.63
CHD3-206ENST00000452447 FGFBP3Q8TAT2 258 aa11.11□□□□□ -0.63
CHD3-206ENST00000452447 UBASH3BQ8TF42 649 aa11.11□□□□□ -0.63
CHD3-206ENST00000452447 PRRC1Q96M27 445 aa11.11□□□□□ -0.63
CHD3-206ENST00000452447 SYT3Q9BQG1 590 aa11.11□□□□□ -0.63
CHD3-206ENST00000452447 SHARPINQ9H0F6 387 aa11.11□□□□□ -0.63
CHD3-206ENST00000452447 NSRP1Q9H0G5 558 aaKnown RBP11.11□□□□□ -0.63
CHD3-206ENST00000452447 TPK1Q9H3S4 243 aa11.11□□□□□ -0.63
CHD3-206ENST00000452447 MS4A5Q9H3V2 200 aa11.11□□□□□ -0.63
CHD3-206ENST00000452447 C1orf198Q9H425 327 aa11.11□□□□□ -0.63
CHD3-206ENST00000452447 LPAR3Q9UBY5 353 aa11.11□□□□□ -0.63
CHD3-206ENST00000452447 REV1Q9UBZ9 1251 aa11.11□□□□□ -0.63
CHD3-206ENST00000452447 SLC7A8Q9UHI5 535 aa11.11□□□□□ -0.63
CHD3-206ENST00000452447 KCNS2Q9ULS6 477 aa11.11□□□□□ -0.63
CHD3-206ENST00000452447 SLC22A23A1A5C7 686 aa11.1□□□□□ -0.63
CHD3-206ENST00000452447 CCDC22O60826 627 aa11.1□□□□□ -0.63
CHD3-206ENST00000452447 TRMUO75648 421 aaKnown RBP11.1□□□□□ -0.63
CHD3-206ENST00000452447 PTHP01270 115 aa11.1□□□□□ -0.63
CHD3-206ENST00000452447 ACADSP16219 412 aa11.1□□□□□ -0.63
CHD3-206ENST00000452447 ZNF23P17027 643 aa11.1□□□□□ -0.63
CHD3-206ENST00000452447 GIFP27352 417 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms