RNA–Protein interactions for RNA: ENST00000451154.5

USP42-204, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-204ENST00000451154 MPP4Q96JB8 637 aa23.29■■□□□ 1.32
USP42-204ENST00000451154 PRSS27Q9BQR3 290 aa23.29■■□□□ 1.32
USP42-204ENST00000451154 ZNF426Q9BUY5 554 aa23.29■■□□□ 1.32
USP42-204ENST00000451154 BLOC1S5-TXNDC5H3BN57 136 aa23.28■■□□□ 1.32
USP42-204ENST00000451154 BCL10O95999 233 aa23.28■■□□□ 1.32
USP42-204ENST00000451154 PGA4P0DJD7 388 aa23.28■■□□□ 1.32
USP42-204ENST00000451154 PGA3P0DJD8 388 aa23.28■■□□□ 1.32
USP42-204ENST00000451154 CDH15P55291 814 aa23.28■■□□□ 1.32
USP42-204ENST00000451154 RPS23P62266 143 aaKnown RBP23.28■■□□□ 1.32
USP42-204ENST00000451154 VMACQ2NL98 169 aa23.28■■□□□ 1.32
USP42-204ENST00000451154 INTS11Q5TA45 600 aaKnown RBP23.28■■□□□ 1.32
USP42-204ENST00000451154 PAQR4Q8N4S7 273 aaPredicted RBP23.28■■□□□ 1.32
USP42-204ENST00000451154 SLC19A3Q9BZV2 496 aa23.28■■□□□ 1.32
USP42-204ENST00000451154 PCDHAC1Q9H158 963 aa23.28■■□□□ 1.32
USP42-204ENST00000451154 RNF121Q9H920 327 aa23.28■■□□□ 1.32
USP42-204ENST00000451154 MEPEQ9NQ76 525 aaPredicted RBP23.28■■□□□ 1.32
USP42-204ENST00000451154 SLC7A8Q9UHI5 535 aa23.28■■□□□ 1.32
USP42-204ENST00000451154 NBEAL1Q6ZS30 2694 aa23.28■■□□□ 1.32
USP42-204ENST00000451154 A0A0G2JND7 137 aa23.27■■□□□ 1.32
USP42-204ENST00000451154 HMGB1P1B2RPK0 211 aaPredicted RBP23.27■■□□□ 1.32
USP42-204ENST00000451154 FBP2O00757 339 aa23.27■■□□□ 1.32
USP42-204ENST00000451154 NAT2P11245 290 aa23.27■■□□□ 1.32
USP42-204ENST00000451154 CCL2P13500 99 aa23.27■■□□□ 1.32
USP42-204ENST00000451154 LSP1P33241 339 aa23.27■■□□□ 1.32
USP42-204ENST00000451154 RUNX1T1Q06455 604 aa23.27■■□□□ 1.32
USP42-204ENST00000451154 ALKBH6Q3KRA9 238 aa23.27■■□□□ 1.32
USP42-204ENST00000451154 NANOGP8Q6NSW7 305 aa23.27■■□□□ 1.32
USP42-204ENST00000451154 OR4K5Q8NGD3 323 aa23.27■■□□□ 1.32
USP42-204ENST00000451154 C1orf159Q96HA4 380 aa23.27■■□□□ 1.32
USP42-204ENST00000451154 NANOGQ9H9S0 305 aa23.27■■□□□ 1.32
USP42-204ENST00000451154 ANK2Q01484 3957 aa23.26■■□□□ 1.31
USP42-204ENST00000451154 EDF1O60869 148 aaKnown RBP23.26■■□□□ 1.31
USP42-204ENST00000451154 FARS2O95363 451 aaKnown RBP23.26■■□□□ 1.31
USP42-204ENST00000451154 FAM157BP0CG42 384 aa23.26■■□□□ 1.31
USP42-204ENST00000451154 MYBPC1Q00872 1141 aa23.26■■□□□ 1.31
USP42-204ENST00000451154 CCDC80Q76M96 950 aa23.26■■□□□ 1.31
USP42-204ENST00000451154 NANOGNBQ7Z5D8 188 aa23.26■■□□□ 1.31
USP42-204ENST00000451154 SLC30A7Q8NEW0 376 aa23.26■■□□□ 1.31
USP42-204ENST00000451154 RDH5Q92781 318 aa23.26■■□□□ 1.31
USP42-204ENST00000451154 ZNF347Q96SE7 839 aa23.26■■□□□ 1.31
USP42-204ENST00000451154 OR51B6Q9H340 312 aa23.26■■□□□ 1.31
USP42-204ENST00000451154 NARFLQ9H6Q4 476 aa23.26■■□□□ 1.31
USP42-204ENST00000451154 SH3GLB1Q9Y371 365 aa23.26■■□□□ 1.31
USP42-204ENST00000451154 A0A1W2PPW3 197 aa23.25■■□□□ 1.31
USP42-204ENST00000451154 CLPTM1O96005 669 aa23.25■■□□□ 1.31
USP42-204ENST00000451154 IGHG1P01857 330 aa23.25■■□□□ 1.31
USP42-204ENST00000451154 F13BP05160 661 aa23.25■■□□□ 1.31
USP42-204ENST00000451154 TNFRSF1BP20333 461 aa23.25■■□□□ 1.31
USP42-204ENST00000451154 SRP14P37108 136 aaKnown RBP23.25■■□□□ 1.31
USP42-204ENST00000451154 GPR6P46095 362 aaPredicted RBP23.25■■□□□ 1.31
USP42-204ENST00000451154 CLRN1P58418 232 aa23.25■■□□□ 1.31
USP42-204ENST00000451154 RABL3Q5HYI8 236 aa23.25■■□□□ 1.31
USP42-204ENST00000451154 TMEM53Q6P2H8 277 aa23.25■■□□□ 1.31
USP42-204ENST00000451154 NKAIN4Q8IVV8 208 aa23.25■■□□□ 1.31
USP42-204ENST00000451154 SYT14Q8NB59 555 aa23.25■■□□□ 1.31
USP42-204ENST00000451154 YIPF5Q969M3 257 aa23.25■■□□□ 1.31
USP42-204ENST00000451154 MCHR2Q969V1 340 aa23.25■■□□□ 1.31
USP42-204ENST00000451154 SHOX2O60902 331 aaPredicted RBP23.24■■□□□ 1.31
USP42-204ENST00000451154 ENTPD5O75356 428 aa23.24■■□□□ 1.31
USP42-204ENST00000451154 FUT1P19526 365 aa23.24■■□□□ 1.31
USP42-204ENST00000451154 RPL18Q07020 188 aaKnown RBP23.24■■□□□ 1.31
USP42-204ENST00000451154 CYLC2Q14093 348 aaPredicted RBP23.24■■□□□ 1.31
USP42-204ENST00000451154 HIST3H3Q16695 136 aa23.24■■□□□ 1.31
USP42-204ENST00000451154 METTL21CQ5VZV1 264 aa23.24■■□□□ 1.31
USP42-204ENST00000451154 RGS7BPQ6MZT1 257 aaPredicted RBP23.24■■□□□ 1.31
USP42-204ENST00000451154 UGT2A3Q6UWM9 527 aa23.24■■□□□ 1.31
USP42-204ENST00000451154 SLC16A14Q7RTX9 510 aa23.24■■□□□ 1.31
USP42-204ENST00000451154 PFN4Q8NHR9 129 aa23.24■■□□□ 1.31
USP42-204ENST00000451154 CLDND2Q8NHS1 167 aa23.24■■□□□ 1.31
USP42-204ENST00000451154 RASSF5Q8WWW0 418 aa23.24■■□□□ 1.31
USP42-204ENST00000451154 TAAR3PQ9P1P4 343 aa23.24■■□□□ 1.31
USP42-204ENST00000451154 A0A1W2PRG6 482 aa23.23■■□□□ 1.31
USP42-204ENST00000451154 WNT9BO14905 357 aa23.23■■□□□ 1.31
USP42-204ENST00000451154 NCR1O76036 304 aa23.23■■□□□ 1.31
USP42-204ENST00000451154 MT-ND1P03886 318 aa23.23■■□□□ 1.31
USP42-204ENST00000451154 ACHEP22303 614 aa23.23■■□□□ 1.31
USP42-204ENST00000451154 UGT2B15P54855 530 aa23.23■■□□□ 1.31
USP42-204ENST00000451154 LIPNQ5VXI9 398 aa23.23■■□□□ 1.31
USP42-204ENST00000451154 REP15Q6BDI9 236 aa23.23■■□□□ 1.31
USP42-204ENST00000451154 HDXQ7Z353 690 aa23.23■■□□□ 1.31
USP42-204ENST00000451154 TMEM255BQ8WV15 326 aa23.23■■□□□ 1.31
USP42-204ENST00000451154 TSPAN32Q96QS1 320 aa23.23■■□□□ 1.31
USP42-204ENST00000451154 ECSITQ9BQ95 431 aa23.23■■□□□ 1.31
USP42-204ENST00000451154 MRPL13Q9BYD1 178 aaKnown RBP23.23■■□□□ 1.31
USP42-204ENST00000451154 CDH20Q9HBT6 801 aa23.23■■□□□ 1.31
USP42-204ENST00000451154 ZNF275Q9NSD4 429 aaPredicted RBP23.23■■□□□ 1.31
USP42-204ENST00000451154 B4DSR2 109 aa23.22■■□□□ 1.31
USP42-204ENST00000451154 AQP2P41181 271 aa23.22■■□□□ 1.31
USP42-204ENST00000451154 DVL1P1P54792 670 aaPredicted RBP23.22■■□□□ 1.31
USP42-204ENST00000451154 TMEM33P57088 247 aa23.22■■□□□ 1.31
USP42-204ENST00000451154 TAS2R41P59536 307 aa23.22■■□□□ 1.31
USP42-204ENST00000451154 ERVS71-1P61550 626 aa23.22■■□□□ 1.31
USP42-204ENST00000451154 NKPD1Q17RQ9 610 aa23.22■■□□□ 1.31
USP42-204ENST00000451154 SLC36A2Q495M3 483 aa23.22■■□□□ 1.31
USP42-204ENST00000451154 DEF8Q6ZN54 512 aa23.22■■□□□ 1.31
USP42-204ENST00000451154 CALHM3Q86XJ0 350 aa23.22■■□□□ 1.31
USP42-204ENST00000451154 LRRC18Q8N456 261 aa23.22■■□□□ 1.31
USP42-204ENST00000451154 LRRC58Q96CX6 371 aa23.22■■□□□ 1.31
USP42-204ENST00000451154 C20orf141Q9NUB4 165 aa23.22■■□□□ 1.31
USP42-204ENST00000451154 RIMS3Q9UJD0 308 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms