RNA–Protein interactions for RNA: ENST00000448038.2

SYNE1-213, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 6,001 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-213ENST00000448038 A0A1B0GVC2 190 aa6.73□□□□□ -1.33
SYNE1-213ENST00000448038 A0A1B0GX12 115 aa6.73□□□□□ -1.33
SYNE1-213ENST00000448038 A6NIN4 97 aa6.73□□□□□ -1.33
SYNE1-213ENST00000448038 FOXS1O43638 330 aa6.73□□□□□ -1.33
SYNE1-213ENST00000448038 NCR1O76036 304 aa6.73□□□□□ -1.33
SYNE1-213ENST00000448038 AMY2AP04746 511 aa6.73□□□□□ -1.33
SYNE1-213ENST00000448038 S100A10P60903 97 aa6.73□□□□□ -1.33
SYNE1-213ENST00000448038 SLC35A2P78381 396 aa6.73□□□□□ -1.33
SYNE1-213ENST00000448038 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.73□□□□□ -1.33
SYNE1-213ENST00000448038 THEM4Q5T1C6 240 aa6.73□□□□□ -1.33
SYNE1-213ENST00000448038 SFRP4Q6FHJ7 346 aaPredicted RBP6.73□□□□□ -1.33
SYNE1-213ENST00000448038 INO80EQ8NBZ0 244 aaPredicted RBP6.73□□□□□ -1.33
SYNE1-213ENST00000448038 OR13F1Q8NGS4 319 aa6.73□□□□□ -1.33
SYNE1-213ENST00000448038 OR5H2Q8NGV7 314 aa6.73□□□□□ -1.33
SYNE1-213ENST00000448038 AKAP1Q92667 903 aaKnown RBP eCLIP6.73□□□□□ -1.33
SYNE1-213ENST00000448038 TSSK2Q96PF2 358 aa6.73□□□□□ -1.33
SYNE1-213ENST00000448038 SORCS2Q96PQ0 1159 aa6.73□□□□□ -1.33
SYNE1-213ENST00000448038 MICU1Q9BPX6 476 aa6.73□□□□□ -1.33
SYNE1-213ENST00000448038 DYNLRB1Q9NP97 96 aa6.73□□□□□ -1.33
SYNE1-213ENST00000448038 CCDC59Q9P031 241 aaKnown RBP6.73□□□□□ -1.33
SYNE1-213ENST00000448038 GSKIPQ9P0R6 139 aa6.73□□□□□ -1.33
SYNE1-213ENST00000448038 OR52A1Q9UKL2 312 aa6.73□□□□□ -1.33
SYNE1-213ENST00000448038 PIKFYVEQ9Y2I7 2098 aa6.73□□□□□ -1.33
SYNE1-213ENST00000448038 ALG1L2C9J202 215 aa6.73□□□□□ -1.33
SYNE1-213ENST00000448038 IL2RAP01589 272 aa6.73□□□□□ -1.33
SYNE1-213ENST00000448038 H2AFB2P0C5Z0 115 aa6.73□□□□□ -1.33
SYNE1-213ENST00000448038 HOXB9P17482 250 aaPredicted RBP6.73□□□□□ -1.33
SYNE1-213ENST00000448038 SERPINA2P20848 420 aa6.73□□□□□ -1.33
SYNE1-213ENST00000448038 MSR1P21757 451 aa6.73□□□□□ -1.33
SYNE1-213ENST00000448038 GABRR1P24046 479 aa6.73□□□□□ -1.33
SYNE1-213ENST00000448038 SHC1P29353 583 aa6.73□□□□□ -1.33
SYNE1-213ENST00000448038 GNRHRP30968 328 aa6.73□□□□□ -1.33
SYNE1-213ENST00000448038 MAB21L1Q13394 359 aa6.73□□□□□ -1.33
SYNE1-213ENST00000448038 WIPI1Q5MNZ9 446 aaPredicted RBP6.73□□□□□ -1.33
SYNE1-213ENST00000448038 OGFOD3Q6PK18 319 aa6.73□□□□□ -1.33
SYNE1-213ENST00000448038 ABCA7Q8IZY2 2146 aa6.73□□□□□ -1.33
SYNE1-213ENST00000448038 TMEM99Q8N816 258 aa6.73□□□□□ -1.33
SYNE1-213ENST00000448038 CSNK2A3Q8NEV1 391 aa6.73□□□□□ -1.33
SYNE1-213ENST00000448038 OR8H1Q8NGG4 311 aa6.73□□□□□ -1.33
SYNE1-213ENST00000448038 LRFN5Q96NI6 719 aa6.73□□□□□ -1.33
SYNE1-213ENST00000448038 GPR87Q9BY21 358 aa6.73□□□□□ -1.33
SYNE1-213ENST00000448038 TMEM74BQ9NUR3 256 aa6.73□□□□□ -1.33
SYNE1-213ENST00000448038 TXNL4BQ9NX01 149 aaKnown RBP6.73□□□□□ -1.33
SYNE1-213ENST00000448038 DNAJB12Q9NXW2 375 aaKnown RBP6.73□□□□□ -1.33
SYNE1-213ENST00000448038 RHBDD3Q9Y3P4 386 aa6.73□□□□□ -1.33
SYNE1-213ENST00000448038 WDR81Q562E7 1941 aa6.73□□□□□ -1.33
SYNE1-213ENST00000448038 NINQ8N4C6 2090 aa6.73□□□□□ -1.33
SYNE1-213ENST00000448038 SIP14410 1827 aa6.73□□□□□ -1.33
SYNE1-213ENST00000448038 AHCTF1Q8WYP5 2266 aa6.73□□□□□ -1.33
SYNE1-213ENST00000448038 PRSS37A4D1T9 235 aa6.73□□□□□ -1.33
SYNE1-213ENST00000448038 SURF4O15260 269 aa6.73□□□□□ -1.33
SYNE1-213ENST00000448038 SGCEO43556 437 aa6.73□□□□□ -1.33
SYNE1-213ENST00000448038 SLC2A1P11166 492 aa6.73□□□□□ -1.33
SYNE1-213ENST00000448038 DIO1P49895 249 aa6.73□□□□□ -1.33
SYNE1-213ENST00000448038 HCCSP53701 268 aa6.73□□□□□ -1.33
SYNE1-213ENST00000448038 GRB2P62993 217 aaKnown RBP6.73□□□□□ -1.33
SYNE1-213ENST00000448038 PCGF3Q3KNV8 242 aa6.73□□□□□ -1.33
SYNE1-213ENST00000448038 ZNF684Q5T5D7 378 aa6.73□□□□□ -1.33
SYNE1-213ENST00000448038 TRAPPC6BQ86SZ2 158 aa6.73□□□□□ -1.33
SYNE1-213ENST00000448038 PPP1R35Q8TAP8 253 aa6.73□□□□□ -1.33
SYNE1-213ENST00000448038 SAP25Q8TEE9 199 aa6.73□□□□□ -1.33
SYNE1-213ENST00000448038 HSD17B8Q92506 261 aa6.73□□□□□ -1.33
SYNE1-213ENST00000448038 KTI12Q96EK9 354 aaPredicted RBP6.73□□□□□ -1.33
SYNE1-213ENST00000448038 FCRL1Q96LA6 429 aa6.73□□□□□ -1.33
SYNE1-213ENST00000448038 CENPOQ9BU64 300 aa6.73□□□□□ -1.33
SYNE1-213ENST00000448038 ABRACLQ9P1F3 81 aa6.73□□□□□ -1.33
SYNE1-213ENST00000448038 FXYD6-FXYD2A0A087WZ82 144 aa6.73□□□□□ -1.33
SYNE1-213ENST00000448038 A0A1W2PR77 199 aa6.73□□□□□ -1.33
SYNE1-213ENST00000448038 NOTOA8MTQ0 251 aa6.73□□□□□ -1.33
SYNE1-213ENST00000448038 SEC14L2O76054 403 aa6.73□□□□□ -1.33
SYNE1-213ENST00000448038 UBCP0CG48 685 aaKnown RBP6.73□□□□□ -1.33
SYNE1-213ENST00000448038 PIPP12273 146 aaPredicted RBP6.73□□□□□ -1.33
SYNE1-213ENST00000448038 ETV5P41161 510 aa6.73□□□□□ -1.33
SYNE1-213ENST00000448038 ETV1P50549 477 aa6.73□□□□□ -1.33
SYNE1-213ENST00000448038 MTCP1P56278 107 aa6.73□□□□□ -1.33
SYNE1-213ENST00000448038 GALEQ14376 348 aa6.73□□□□□ -1.33
SYNE1-213ENST00000448038 ZNF766Q5HY98 468 aa6.73□□□□□ -1.33
SYNE1-213ENST00000448038 SYT6Q5T7P8 510 aaPredicted RBP6.73□□□□□ -1.33
SYNE1-213ENST00000448038 STPG1Q5TH74 334 aa6.73□□□□□ -1.33
SYNE1-213ENST00000448038 LIPNQ5VXI9 398 aa6.73□□□□□ -1.33
SYNE1-213ENST00000448038 CCBE1Q6UXH8 406 aaPredicted RBP6.73□□□□□ -1.33
SYNE1-213ENST00000448038 DCDC5Q6ZRR9 648 aa6.73□□□□□ -1.33
SYNE1-213ENST00000448038 NANOGP1Q8N7R0 232 aa6.73□□□□□ -1.33
SYNE1-213ENST00000448038 BBS1Q8NFJ9 593 aa6.73□□□□□ -1.33
SYNE1-213ENST00000448038 OR2V1Q8NHB1 315 aa6.73□□□□□ -1.33
SYNE1-213ENST00000448038 THAP6Q8TBB0 222 aa6.73□□□□□ -1.33
SYNE1-213ENST00000448038 OR14A2Q96R54 314 aa6.73□□□□□ -1.33
SYNE1-213ENST00000448038 FXYD6Q9H0Q3 95 aa6.73□□□□□ -1.33
SYNE1-213ENST00000448038 NRIP3Q9NQ35 241 aa6.73□□□□□ -1.33
SYNE1-213ENST00000448038 COPZ2Q9P299 210 aa6.73□□□□□ -1.33
SYNE1-213ENST00000448038 LHX6Q9UPM6 363 aa6.73□□□□□ -1.33
SYNE1-213ENST00000448038 GREB1Q4ZG55 1949 aa6.73□□□□□ -1.33
SYNE1-213ENST00000448038 PVALBP20472 110 aaPredicted RBP6.72□□□□□ -1.33
SYNE1-213ENST00000448038 CD40LGP29965 261 aa6.72□□□□□ -1.33
SYNE1-213ENST00000448038 RAB2AP61019 212 aa6.72□□□□□ -1.33
SYNE1-213ENST00000448038 LTBQ06643 244 aa6.72□□□□□ -1.33
SYNE1-213ENST00000448038 NPSR1Q6W5P4 371 aa6.72□□□□□ -1.33
SYNE1-213ENST00000448038 FCRLAQ7L513 359 aa6.72□□□□□ -1.33
SYNE1-213ENST00000448038 EXD3Q8N9H8 876 aa6.72□□□□□ -1.33
SYNE1-213ENST00000448038 NUBPLQ8TB37 319 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms