RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 IL1RAPQ9NPH3 570 aa12.91□□□□□ -0.34
HDAC4-204ENST00000446876 CRNNQ9UBG3 495 aaPredicted RBP12.91□□□□□ -0.34
HDAC4-204ENST00000446876 ZNF346Q9UL40 294 aaKnown RBP12.91□□□□□ -0.34
HDAC4-204ENST00000446876 TMEM5Q9Y2B1 443 aa12.91□□□□□ -0.34
HDAC4-204ENST00000446876 ADAM18Q9Y3Q7 739 aa12.91□□□□□ -0.34
HDAC4-204ENST00000446876 SH3PXD2BA1X283 911 aa12.9□□□□□ -0.34
HDAC4-204ENST00000446876 NPIPB13A6NJU9 1138 aa12.9□□□□□ -0.34
HDAC4-204ENST00000446876 NPIPB4C9JG80 1138 aa12.9□□□□□ -0.34
HDAC4-204ENST00000446876 H7C1C5 153 aa12.9□□□□□ -0.34
HDAC4-204ENST00000446876 IGKV3-15P01624 115 aa12.9□□□□□ -0.34
HDAC4-204ENST00000446876 IGLV1-44P01699 117 aa12.9□□□□□ -0.34
HDAC4-204ENST00000446876 IGHMP01871 453 aa12.9□□□□□ -0.34
HDAC4-204ENST00000446876 PATE4P0C8F1 98 aa12.9□□□□□ -0.34
HDAC4-204ENST00000446876 HOXB1P14653 301 aaPredicted RBP12.9□□□□□ -0.34
HDAC4-204ENST00000446876 CBR1P16152 277 aa12.9□□□□□ -0.34
HDAC4-204ENST00000446876 CALCRP30988 508 aa12.9□□□□□ -0.34
HDAC4-204ENST00000446876 RPL4P36578 427 aaKnown RBP12.9□□□□□ -0.34
HDAC4-204ENST00000446876 ACVR1BP36896 505 aa12.9□□□□□ -0.34
HDAC4-204ENST00000446876 CDKN1AP38936 164 aa12.9□□□□□ -0.34
HDAC4-204ENST00000446876 PTH2RP49190 550 aa12.9□□□□□ -0.34
HDAC4-204ENST00000446876 RPL27P61353 136 aaKnown RBP12.9□□□□□ -0.34
HDAC4-204ENST00000446876 LCN6P62502 163 aa12.9□□□□□ -0.34
HDAC4-204ENST00000446876 ERVK-25P63136 954 aa12.9□□□□□ -0.34
HDAC4-204ENST00000446876 ADAM8P78325 824 aa12.9□□□□□ -0.34
HDAC4-204ENST00000446876 NKX6-1P78426 367 aaPredicted RBP12.9□□□□□ -0.34
HDAC4-204ENST00000446876 NAAAQ02083 359 aa12.9□□□□□ -0.34
HDAC4-204ENST00000446876 CD47Q08722 323 aa12.9□□□□□ -0.34
HDAC4-204ENST00000446876 HIST3H3Q16695 136 aa12.9□□□□□ -0.34
HDAC4-204ENST00000446876 ZBED5Q49AG3 693 aa12.9□□□□□ -0.34
HDAC4-204ENST00000446876 ZNF627Q7L945 461 aa12.9□□□□□ -0.34
HDAC4-204ENST00000446876 SKA3Q8IX90 412 aa12.9□□□□□ -0.34
HDAC4-204ENST00000446876 ZNF519Q8TB69 540 aa12.9□□□□□ -0.34
HDAC4-204ENST00000446876 SLC7A6OSQ96CW6 309 aaPredicted RBP12.9□□□□□ -0.34
HDAC4-204ENST00000446876 RSRC1Q96IZ7 334 aaKnown RBP12.9□□□□□ -0.34
HDAC4-204ENST00000446876 SH3GL3Q99963 347 aa12.9□□□□□ -0.34
HDAC4-204ENST00000446876 KATNB1Q9BVA0 655 aa12.9□□□□□ -0.34
HDAC4-204ENST00000446876 MUC13Q9H3R2 512 aa12.9□□□□□ -0.34
HDAC4-204ENST00000446876 TMEM38BQ9NVV0 291 aa12.9□□□□□ -0.34
HDAC4-204ENST00000446876 B3GNT2Q9NY97 397 aa12.9□□□□□ -0.34
HDAC4-204ENST00000446876 IL20RAQ9UHF4 553 aa12.9□□□□□ -0.34
HDAC4-204ENST00000446876 ITPR3Q14573 2671 aa12.89□□□□□ -0.35
HDAC4-204ENST00000446876 VPS13CQ709C8 3753 aa12.89□□□□□ -0.35
HDAC4-204ENST00000446876 GYG2O15488 501 aa12.89□□□□□ -0.35
HDAC4-204ENST00000446876 CD8AP01732 235 aa12.89□□□□□ -0.35
HDAC4-204ENST00000446876 FXYD6P3P58550 94 aa12.89□□□□□ -0.35
HDAC4-204ENST00000446876 GSG1Q2KHT4 349 aa12.89□□□□□ -0.35
HDAC4-204ENST00000446876 MTX3Q5HYI7 312 aa12.89□□□□□ -0.35
HDAC4-204ENST00000446876 Q5PR19 223 aa12.89□□□□□ -0.35
HDAC4-204ENST00000446876 C1QTNF12Q5T7M4 302 aa12.89□□□□□ -0.35
HDAC4-204ENST00000446876 THSD4Q6ZMP0 1018 aa12.89□□□□□ -0.35
HDAC4-204ENST00000446876 HDDC2Q7Z4H3 204 aa12.89□□□□□ -0.35
HDAC4-204ENST00000446876 ZER1Q7Z7L7 766 aa12.89□□□□□ -0.35
HDAC4-204ENST00000446876 TGIF2LYQ8IUE0 185 aa12.89□□□□□ -0.35
HDAC4-204ENST00000446876 DEPDC4Q8N2C3 294 aa12.89□□□□□ -0.35
HDAC4-204ENST00000446876 SLC22A24Q8N4F4 322 aa12.89□□□□□ -0.35
HDAC4-204ENST00000446876 NSMAFQ92636 917 aa12.89□□□□□ -0.35
HDAC4-204ENST00000446876 NMD3Q96D46 503 aaKnown RBP12.89□□□□□ -0.35
HDAC4-204ENST00000446876 ASB9Q96DX5 294 aa12.89□□□□□ -0.35
HDAC4-204ENST00000446876 MS4A3Q96HJ5 214 aa12.89□□□□□ -0.35
HDAC4-204ENST00000446876 KCNK17Q96T54 332 aa12.89□□□□□ -0.35
HDAC4-204ENST00000446876 DHRS9Q9BPW9 319 aa12.89□□□□□ -0.35
HDAC4-204ENST00000446876 TRAF4Q9BUZ4 470 aaPredicted RBP12.89□□□□□ -0.35
HDAC4-204ENST00000446876 AURKCQ9UQB9 309 aa12.89□□□□□ -0.35
HDAC4-204ENST00000446876 SIGLEC7Q9Y286 467 aa12.89□□□□□ -0.35
HDAC4-204ENST00000446876 ZNF469Q96JG9 3925 aaPredicted RBP12.89□□□□□ -0.35
HDAC4-204ENST00000446876 HIVEP1P15822 2718 aa12.89□□□□□ -0.35
HDAC4-204ENST00000446876 UNC119BA6NIH7 251 aa12.88□□□□□ -0.35
HDAC4-204ENST00000446876 CENPBD1B2RD01 187 aa12.88□□□□□ -0.35
HDAC4-204ENST00000446876 ACOT8O14734 319 aa12.88□□□□□ -0.35
HDAC4-204ENST00000446876 OR10H3O60404 316 aa12.88□□□□□ -0.35
HDAC4-204ENST00000446876 PTP4A3O75365 173 aa12.88□□□□□ -0.35
HDAC4-204ENST00000446876 CD14P08571 375 aa12.88□□□□□ -0.35
HDAC4-204ENST00000446876 CDAP32320 146 aa12.88□□□□□ -0.35
HDAC4-204ENST00000446876 ARR3P36575 388 aa12.88□□□□□ -0.35
HDAC4-204ENST00000446876 MAGEA2P43356 314 aa12.88□□□□□ -0.35
HDAC4-204ENST00000446876 GIPRP48546 466 aa12.88□□□□□ -0.35
HDAC4-204ENST00000446876 PTDSS1P48651 473 aaKnown RBP12.88□□□□□ -0.35
HDAC4-204ENST00000446876 FABP6P51161 128 aa12.88□□□□□ -0.35
HDAC4-204ENST00000446876 SMIM11AP58511 58 aa12.88□□□□□ -0.35
HDAC4-204ENST00000446876 PPP1R8Q12972 351 aaKnown RBP12.88□□□□□ -0.35
HDAC4-204ENST00000446876 TAF11Q15544 211 aa12.88□□□□□ -0.35
HDAC4-204ENST00000446876 ANKDD1AQ495B1 522 aa12.88□□□□□ -0.35
HDAC4-204ENST00000446876 C10orf128Q5T292 105 aa12.88□□□□□ -0.35
HDAC4-204ENST00000446876 PIWIL3Q7Z3Z3 882 aaKnown RBP12.88□□□□□ -0.35
HDAC4-204ENST00000446876 Q96M85 177 aa12.88□□□□□ -0.35
HDAC4-204ENST00000446876 KCNS3Q9BQ31 491 aa12.88□□□□□ -0.35
HDAC4-204ENST00000446876 GSX2Q9BZM3 304 aa12.88□□□□□ -0.35
HDAC4-204ENST00000446876 CXorf56Q9H5V9 222 aa12.88□□□□□ -0.35
HDAC4-204ENST00000446876 VNN3Q9NY84 501 aa12.88□□□□□ -0.35
HDAC4-204ENST00000446876 STX18Q9P2W9 335 aaKnown RBP12.88□□□□□ -0.35
HDAC4-204ENST00000446876 UGT2A1Q9Y4X1 527 aa12.88□□□□□ -0.35
HDAC4-204ENST00000446876 IGHV2OR16-5A0A0B4J2B6 119 aa12.87□□□□□ -0.35
HDAC4-204ENST00000446876 OVOL3O00110 214 aa12.87□□□□□ -0.35
HDAC4-204ENST00000446876 ARHGEF9O43307 516 aa12.87□□□□□ -0.35
HDAC4-204ENST00000446876 NDUFB2O95178 105 aa12.87□□□□□ -0.35
HDAC4-204ENST00000446876 CRYAAP02489 173 aa12.87□□□□□ -0.35
HDAC4-204ENST00000446876 OR8G3PP0DMU2 310 aa12.87□□□□□ -0.35
HDAC4-204ENST00000446876 TTKP33981 857 aa12.87□□□□□ -0.35
HDAC4-204ENST00000446876 ERFP50548 548 aa12.87□□□□□ -0.35
HDAC4-204ENST00000446876 ZNF84P51523 738 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms