RNA–Protein interactions for RNA: ENST00000446690.2

COL6A4P1-201, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 2 BASIC

Gene COL6A4P1, Length 2,336 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-201ENST00000446690 RNF138Q8WVD3 245 aa8.56□□□□□ -1.04
COL6A4P1-201ENST00000446690 NSMAFQ92636 917 aa8.56□□□□□ -1.04
COL6A4P1-201ENST00000446690 TXNDC15Q96J42 360 aa8.56□□□□□ -1.04
COL6A4P1-201ENST00000446690 LOXL4Q96JB6 756 aa8.56□□□□□ -1.04
COL6A4P1-201ENST00000446690 GNRHR2Q96P88 292 aa8.56□□□□□ -1.04
COL6A4P1-201ENST00000446690 OR5B2Q96R09 309 aa8.56□□□□□ -1.04
COL6A4P1-201ENST00000446690 EMC6Q9BV81 110 aa8.56□□□□□ -1.04
COL6A4P1-201ENST00000446690 SP140LQ9H930 580 aa8.56□□□□□ -1.04
COL6A4P1-201ENST00000446690 CHST11Q9NPF2 352 aa8.56□□□□□ -1.04
COL6A4P1-201ENST00000446690 B3GAT2Q9NPZ5 323 aa8.56□□□□□ -1.04
COL6A4P1-201ENST00000446690 TCFL5Q9UL49 500 aa8.56□□□□□ -1.04
COL6A4P1-201ENST00000446690 CLEC4AQ9UMR7 237 aa8.56□□□□□ -1.04
COL6A4P1-201ENST00000446690 COA3Q9Y2R0 106 aaPredicted RBP8.56□□□□□ -1.04
COL6A4P1-201ENST00000446690 AK6Q9Y3D8 172 aaKnown RBP8.56□□□□□ -1.04
COL6A4P1-201ENST00000446690 FKBP7Q9Y680 259 aa8.56□□□□□ -1.04
COL6A4P1-201ENST00000446690 MPDZO75970 2070 aa8.56□□□□□ -1.04
COL6A4P1-201ENST00000446690 ACOD1A6NK06 481 aa8.55□□□□□ -1.04
COL6A4P1-201ENST00000446690 LIPT2A6NK58 231 aa8.55□□□□□ -1.04
COL6A4P1-201ENST00000446690 SSX4O60224 188 aa8.55□□□□□ -1.04
COL6A4P1-201ENST00000446690 ARL6IP5O75915 188 aa8.55□□□□□ -1.04
COL6A4P1-201ENST00000446690 DKK1O94907 266 aa8.55□□□□□ -1.04
COL6A4P1-201ENST00000446690 PAHP00439 452 aa8.55□□□□□ -1.04
COL6A4P1-201ENST00000446690 CCL3P10147 92 aa8.55□□□□□ -1.04
COL6A4P1-201ENST00000446690 PSKH1P11801 424 aa8.55□□□□□ -1.04
COL6A4P1-201ENST00000446690 ELK1P19419 428 aa8.55□□□□□ -1.04
COL6A4P1-201ENST00000446690 ALOX5APP20292 161 aa8.55□□□□□ -1.04
COL6A4P1-201ENST00000446690 CFL1P23528 166 aaKnown RBP8.55□□□□□ -1.04
COL6A4P1-201ENST00000446690 EVX1P49640 407 aa8.55□□□□□ -1.04
COL6A4P1-201ENST00000446690 OR2B6P58173 313 aa8.55□□□□□ -1.04
COL6A4P1-201ENST00000446690 ARPC4P59998 168 aa8.55□□□□□ -1.04
COL6A4P1-201ENST00000446690 RPS11P62280 158 aaKnown RBP eCLIP8.55□□□□□ -1.04
COL6A4P1-201ENST00000446690 P2RY14Q15391 338 aa8.55□□□□□ -1.04
COL6A4P1-201ENST00000446690 HSD17B12Q53GQ0 312 aa8.55□□□□□ -1.04
COL6A4P1-201ENST00000446690 PLA2G2CQ5R387 149 aa8.55□□□□□ -1.04
COL6A4P1-201ENST00000446690 ZNF684Q5T5D7 378 aa8.55□□□□□ -1.04
COL6A4P1-201ENST00000446690 PAMR1Q6UXH9 720 aa8.55□□□□□ -1.04
COL6A4P1-201ENST00000446690 SAMD12Q8N8I0 201 aa8.55□□□□□ -1.04
COL6A4P1-201ENST00000446690 CT55Q8WUE5 264 aa8.55□□□□□ -1.04
COL6A4P1-201ENST00000446690 TAAR9Q96RI9 348 aa8.55□□□□□ -1.04
COL6A4P1-201ENST00000446690 AMELYQ99218 206 aa8.55□□□□□ -1.04
COL6A4P1-201ENST00000446690 NOX4Q9NPH5 578 aa8.55□□□□□ -1.04
COL6A4P1-201ENST00000446690 HPF1Q9NWY4 346 aa8.55□□□□□ -1.04
COL6A4P1-201ENST00000446690 SLCO1C1Q9NYB5 712 aa8.55□□□□□ -1.04
COL6A4P1-201ENST00000446690 FRRS1LQ9P0K9 344 aa8.55□□□□□ -1.04
COL6A4P1-201ENST00000446690 GTF2A1LQ9UNN4 478 aa8.55□□□□□ -1.04
COL6A4P1-201ENST00000446690 ZNF281Q9Y2X9 895 aa8.55□□□□□ -1.04
COL6A4P1-201ENST00000446690 TMEM14AQ9Y6G1 99 aa8.55□□□□□ -1.04
COL6A4P1-201ENST00000446690 A0A1W2PQ09 198 aa8.55□□□□□ -1.04
COL6A4P1-201ENST00000446690 RGS13O14921 159 aa8.55□□□□□ -1.04
COL6A4P1-201ENST00000446690 UPK3AO75631 287 aa8.55□□□□□ -1.04
COL6A4P1-201ENST00000446690 PTTG1O95997 202 aa8.55□□□□□ -1.04
COL6A4P1-201ENST00000446690 SOX2P48431 317 aa8.55□□□□□ -1.04
COL6A4P1-201ENST00000446690 DAP3P51398 398 aaKnown RBP8.55□□□□□ -1.04
COL6A4P1-201ENST00000446690 HSF1Q00613 529 aa8.55□□□□□ -1.04
COL6A4P1-201ENST00000446690 FMODQ06828 376 aa8.55□□□□□ -1.04
COL6A4P1-201ENST00000446690 TOMM20Q15388 145 aa8.55□□□□□ -1.04
COL6A4P1-201ENST00000446690 TMEM176BQ3YBM2 270 aaPredicted RBP8.55□□□□□ -1.04
COL6A4P1-201ENST00000446690 C3orf33Q6P1S2 294 aa8.55□□□□□ -1.04
COL6A4P1-201ENST00000446690 CCBE1Q6UXH8 406 aaPredicted RBP8.55□□□□□ -1.04
COL6A4P1-201ENST00000446690 LRRN1Q6UXK5 716 aa8.55□□□□□ -1.04
COL6A4P1-201ENST00000446690 WDFY1Q8IWB7 410 aa8.55□□□□□ -1.04
COL6A4P1-201ENST00000446690 RDH10Q8IZV5 341 aa8.55□□□□□ -1.04
COL6A4P1-201ENST00000446690 OR5AK2Q8NH90 309 aa8.55□□□□□ -1.04
COL6A4P1-201ENST00000446690 OTOSQ8NHW6 89 aa8.55□□□□□ -1.04
COL6A4P1-201ENST00000446690 ACOT12Q8WYK0 555 aa8.55□□□□□ -1.04
COL6A4P1-201ENST00000446690 UBL7Q96S82 380 aaPredicted RBP8.55□□□□□ -1.04
COL6A4P1-201ENST00000446690 POTEKPQ9BYX7 375 aa8.55□□□□□ -1.04
COL6A4P1-201ENST00000446690 CPNE5Q9HCH3 593 aa8.55□□□□□ -1.04
COL6A4P1-201ENST00000446690 VSX1Q9NZR4 365 aaPredicted RBP8.55□□□□□ -1.04
COL6A4P1-201ENST00000446690 EXTL2Q9UBQ6 330 aa8.55□□□□□ -1.04
COL6A4P1-201ENST00000446690 ADAM30Q9UKF2 790 aa8.55□□□□□ -1.04
COL6A4P1-201ENST00000446690 TBC1D24Q9ULP9 559 aa8.55□□□□□ -1.04
COL6A4P1-201ENST00000446690 IGLV3-32A0A0A0MS00 114 aa8.54□□□□□ -1.04
COL6A4P1-201ENST00000446690 A0A0B4J203 849 aa8.54□□□□□ -1.04
COL6A4P1-201ENST00000446690 ANKRD61A6NGH8 418 aa8.54□□□□□ -1.04
COL6A4P1-201ENST00000446690 ZNF879B4DU55 563 aa8.54□□□□□ -1.04
COL6A4P1-201ENST00000446690 SLC19A2O60779 497 aa8.54□□□□□ -1.04
COL6A4P1-201ENST00000446690 GATBO75879 557 aaKnown RBP8.54□□□□□ -1.04
COL6A4P1-201ENST00000446690 IGHMP01871 453 aa8.54□□□□□ -1.04
COL6A4P1-201ENST00000446690 CSF3P09919 207 aa8.54□□□□□ -1.04
COL6A4P1-201ENST00000446690 SRMP19623 302 aa8.54□□□□□ -1.04
COL6A4P1-201ENST00000446690 CRABP1P29762 137 aa8.54□□□□□ -1.04
COL6A4P1-201ENST00000446690 NR4A2P43354 598 aa8.54□□□□□ -1.04
COL6A4P1-201ENST00000446690 NKX2-5P52952 324 aaPredicted RBP8.54□□□□□ -1.04
COL6A4P1-201ENST00000446690 BIDP55957 195 aa8.54□□□□□ -1.04
COL6A4P1-201ENST00000446690 GLO1Q04760 184 aa8.54□□□□□ -1.04
COL6A4P1-201ENST00000446690 EGR3Q06889 387 aa8.54□□□□□ -1.04
COL6A4P1-201ENST00000446690 SCN1BQ07699 218 aa8.54□□□□□ -1.04
COL6A4P1-201ENST00000446690 ZP4Q12836 540 aa8.54□□□□□ -1.04
COL6A4P1-201ENST00000446690 ALKBH1Q13686 389 aaKnown RBP8.54□□□□□ -1.04
COL6A4P1-201ENST00000446690 SMUG1Q53HV7 270 aa8.54□□□□□ -1.04
COL6A4P1-201ENST00000446690 ZNF468Q5VIY5 522 aaPredicted RBP8.54□□□□□ -1.04
COL6A4P1-201ENST00000446690 SLC22A10Q63ZE4 541 aa8.54□□□□□ -1.04
COL6A4P1-201ENST00000446690 B3GNTL1Q67FW5 361 aaPredicted RBP8.54□□□□□ -1.04
COL6A4P1-201ENST00000446690 TMEM225Q6GV28 225 aa8.54□□□□□ -1.04
COL6A4P1-201ENST00000446690 PPP1R32Q7Z5V6 425 aa8.54□□□□□ -1.04
COL6A4P1-201ENST00000446690 AKAP14Q86UN6 197 aa8.54□□□□□ -1.04
COL6A4P1-201ENST00000446690 PLCZ1Q86YW0 608 aa8.54□□□□□ -1.04
COL6A4P1-201ENST00000446690 Q8N402 240 aa8.54□□□□□ -1.04
COL6A4P1-201ENST00000446690 ZNF433Q8N7K0 673 aaPredicted RBP8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms