RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 UBE3DQ7Z6J8 389 aa15.22■□□□□ 0.03
TCOF1-206ENST00000445265 SLC22A24Q8N4F4 322 aa15.22■□□□□ 0.03
TCOF1-206ENST00000445265 NPRL2Q8WTW4 380 aa15.22■□□□□ 0.03
TCOF1-206ENST00000445265 MIB2Q96AX9 1013 aa15.22■□□□□ 0.03
TCOF1-206ENST00000445265 GJE1A6NN92 205 aa15.21■□□□□ 0.03
TCOF1-206ENST00000445265 NUPL2O15504 423 aaKnown RBP15.21■□□□□ 0.03
TCOF1-206ENST00000445265 DRD3P35462 400 aa15.21■□□□□ 0.03
TCOF1-206ENST00000445265 LAIR1Q6GTX8 287 aa15.21■□□□□ 0.03
TCOF1-206ENST00000445265 MRM1Q6IN84 353 aaKnown RBP15.21■□□□□ 0.03
TCOF1-206ENST00000445265 LPCAT3Q6P1A2 487 aa15.21■□□□□ 0.03
TCOF1-206ENST00000445265 STAC2Q6ZMT1 411 aa15.21■□□□□ 0.03
TCOF1-206ENST00000445265 ARIH2OSQ8N7S6 290 aa15.21■□□□□ 0.03
TCOF1-206ENST00000445265 MFSD8Q8NHS3 518 aa15.21■□□□□ 0.03
TCOF1-206ENST00000445265 DVL3Q92997 716 aaPredicted RBP15.21■□□□□ 0.03
TCOF1-206ENST00000445265 MIXL1Q9H2W2 232 aa15.21■□□□□ 0.03
TCOF1-206ENST00000445265 ZNF442Q9H7R0 627 aa15.21■□□□□ 0.03
TCOF1-206ENST00000445265 MAN2C1Q9NTJ4 1040 aa15.21■□□□□ 0.03
TCOF1-206ENST00000445265 SERGEFQ9UGK8 458 aa15.21■□□□□ 0.03
TCOF1-206ENST00000445265 RAB22AQ9UL26 194 aa15.21■□□□□ 0.03
TCOF1-206ENST00000445265 ZNF236Q9UL36 1845 aa15.21■□□□□ 0.03
TCOF1-206ENST00000445265 LPLP06858 475 aa15.21■□□□□ 0.03
TCOF1-206ENST00000445265 CSNK1A1P48729 337 aa15.21■□□□□ 0.03
TCOF1-206ENST00000445265 RAB5BP61020 215 aa15.21■□□□□ 0.03
TCOF1-206ENST00000445265 PLP2Q04941 152 aa15.21■□□□□ 0.03
TCOF1-206ENST00000445265 ZNF616Q08AN1 781 aa15.21■□□□□ 0.03
TCOF1-206ENST00000445265 DOC2BQ14184 412 aa15.21■□□□□ 0.03
TCOF1-206ENST00000445265 MARCH3Q86UD3 253 aa15.21■□□□□ 0.03
TCOF1-206ENST00000445265 DERL3Q96Q80 235 aa15.21■□□□□ 0.03
TCOF1-206ENST00000445265 AUNIPQ9H7T9 357 aa15.21■□□□□ 0.03
TCOF1-206ENST00000445265 PLEKHJ1Q9NW61 149 aa15.21■□□□□ 0.03
TCOF1-206ENST00000445265 OR52A1Q9UKL2 312 aa15.21■□□□□ 0.03
TCOF1-206ENST00000445265 hCG_1807616A0A1W2PRN6 198 aa15.21■□□□□ 0.03
TCOF1-206ENST00000445265 RPL18Q07020 188 aaKnown RBP15.21■□□□□ 0.03
TCOF1-206ENST00000445265 INSL4Q14641 139 aa15.21■□□□□ 0.03
TCOF1-206ENST00000445265 GPNMBQ14956 572 aa15.21■□□□□ 0.03
TCOF1-206ENST00000445265 TMEM164Q5U3C3 297 aa15.21■□□□□ 0.03
TCOF1-206ENST00000445265 MRGPRX1Q96LB2 322 aa15.21■□□□□ 0.03
TCOF1-206ENST00000445265 SIX6O95475 246 aa15.2■□□□□ 0.02
TCOF1-206ENST00000445265 ATF1P18846 271 aa15.2■□□□□ 0.02
TCOF1-206ENST00000445265 ACSM1Q08AH1 577 aa15.2■□□□□ 0.02
TCOF1-206ENST00000445265 MELKQ14680 651 aa15.2■□□□□ 0.02
TCOF1-206ENST00000445265 ZBTB37Q5TC79 503 aa15.2■□□□□ 0.02
TCOF1-206ENST00000445265 C1orf53Q5VUE5 145 aa15.2■□□□□ 0.02
TCOF1-206ENST00000445265 OR56B1Q8NGI3 324 aa15.2■□□□□ 0.02
TCOF1-206ENST00000445265 OR4K15Q8NH41 348 aa15.2■□□□□ 0.02
TCOF1-206ENST00000445265 KCNG3Q8TAE7 436 aa15.2■□□□□ 0.02
TCOF1-206ENST00000445265 FNDC9Q8TBE3 224 aa15.2■□□□□ 0.02
TCOF1-206ENST00000445265 EXO1Q9UQ84 846 aaKnown RBP15.2■□□□□ 0.02
TCOF1-206ENST00000445265 CDC42EP2O14613 210 aa15.2■□□□□ 0.02
TCOF1-206ENST00000445265 HTR3BO95264 441 aa15.2■□□□□ 0.02
TCOF1-206ENST00000445265 GNRHRP30968 328 aa15.2■□□□□ 0.02
TCOF1-206ENST00000445265 ZNF425Q6IV72 752 aa15.2■□□□□ 0.02
TCOF1-206ENST00000445265 TMUB2Q71RG4 321 aa15.2■□□□□ 0.02
TCOF1-206ENST00000445265 OR10K1Q8NGX5 313 aa15.2■□□□□ 0.02
TCOF1-206ENST00000445265 MRPL38Q96DV4 380 aaKnown RBP15.2■□□□□ 0.02
TCOF1-206ENST00000445265 EIF5A2Q9GZV4 153 aaKnown RBP15.2■□□□□ 0.02
TCOF1-206ENST00000445265 MRPS18AQ9NVS2 196 aaKnown RBP15.2■□□□□ 0.02
TCOF1-206ENST00000445265 PIGBOS1A0A0B4J2F0 54 aa15.2■□□□□ 0.02
TCOF1-206ENST00000445265 TPOP07202 933 aa15.2■□□□□ 0.02
TCOF1-206ENST00000445265 LBX1P52954 281 aa15.2■□□□□ 0.02
TCOF1-206ENST00000445265 FAM53BQ14153 422 aa15.2■□□□□ 0.02
TCOF1-206ENST00000445265 ZNF770Q6IQ21 691 aaPredicted RBP15.2■□□□□ 0.02
TCOF1-206ENST00000445265 VN1R4Q7Z5H5 301 aa15.2■□□□□ 0.02
TCOF1-206ENST00000445265 TSSK2Q96PF2 358 aa15.2■□□□□ 0.02
TCOF1-206ENST00000445265 PBDC1Q9BVG4 233 aa15.2■□□□□ 0.02
TCOF1-206ENST00000445265 LAT2Q9GZY6 243 aa15.2■□□□□ 0.02
TCOF1-206ENST00000445265 TSPAN10Q9H1Z9 355 aaPredicted RBP15.2■□□□□ 0.02
TCOF1-206ENST00000445265 A0A087WUJ7 227 aa15.2■□□□□ 0.02
TCOF1-206ENST00000445265 TRBV11-1A0A0K0K1C0 115 aa15.2■□□□□ 0.02
TCOF1-206ENST00000445265 M0QYG6 137 aa15.2■□□□□ 0.02
TCOF1-206ENST00000445265 ACHEP22303 614 aa15.2■□□□□ 0.02
TCOF1-206ENST00000445265 RAD52P43351 418 aa15.2■□□□□ 0.02
TCOF1-206ENST00000445265 BEX5Q5H9J7 111 aa15.2■□□□□ 0.02
TCOF1-206ENST00000445265 ZSCAN1Q8NBB4 408 aa15.2■□□□□ 0.02
TCOF1-206ENST00000445265 ZNF707Q96C28 371 aaPredicted RBP15.2■□□□□ 0.02
TCOF1-206ENST00000445265 PELI1Q96FA3 418 aa15.2■□□□□ 0.02
TCOF1-206ENST00000445265 SEC22AQ96IW7 307 aa15.2■□□□□ 0.02
TCOF1-206ENST00000445265 OR2A5Q96R48 311 aa15.2■□□□□ 0.02
TCOF1-206ENST00000445265 TMEM59Q9BXS4 323 aa15.2■□□□□ 0.02
TCOF1-206ENST00000445265 PLEK2Q9NYT0 353 aa15.2■□□□□ 0.02
TCOF1-206ENST00000445265 TMEM200CA6NKL6 621 aa15.19■□□□□ 0.02
TCOF1-206ENST00000445265 IGHA1P01876 353 aa15.19■□□□□ 0.02
TCOF1-206ENST00000445265 RHEBQ15382 184 aa15.19■□□□□ 0.02
TCOF1-206ENST00000445265 ZNF79Q15937 498 aa15.19■□□□□ 0.02
TCOF1-206ENST00000445265 YOD1Q5VVQ6 348 aaPredicted RBP15.19■□□□□ 0.02
TCOF1-206ENST00000445265 KANSL1Q7Z3B3 1105 aa15.19■□□□□ 0.02
TCOF1-206ENST00000445265 C6orf106Q9H6K1 298 aaPredicted RBP15.19■□□□□ 0.02
TCOF1-206ENST00000445265 ZNF346Q9UL40 294 aaKnown RBP15.19■□□□□ 0.02
TCOF1-206ENST00000445265 FLVCR2Q9UPI3 526 aa15.19■□□□□ 0.02
TCOF1-206ENST00000445265 RHBDD3Q9Y3P4 386 aa15.19■□□□□ 0.02
TCOF1-206ENST00000445265 TRPM6Q9BX84 2022 aa15.19■□□□□ 0.02
TCOF1-206ENST00000445265 RLFQ13129 1914 aa15.19■□□□□ 0.02
TCOF1-206ENST00000445265 H3BUI4 141 aa15.19■□□□□ 0.02
TCOF1-206ENST00000445265 ARPC3O15145 178 aa15.19■□□□□ 0.02
TCOF1-206ENST00000445265 TAS2R46P59540 309 aa15.19■□□□□ 0.02
TCOF1-206ENST00000445265 BTG2P78543 158 aa15.19■□□□□ 0.02
TCOF1-206ENST00000445265 PLGLB1Q02325 96 aa15.19■□□□□ 0.02
TCOF1-206ENST00000445265 UPRTQ96BW1 309 aa15.19■□□□□ 0.02
TCOF1-206ENST00000445265 SELENOIQ9C0D9 397 aa15.19■□□□□ 0.02
TCOF1-206ENST00000445265 NRSN2Q9GZP1 204 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms