RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 TAB1Q15750 504 aa12.39□□□□□ -0.43
SSBP3-208ENST00000444533 GABRA6Q16445 453 aa12.39□□□□□ -0.43
SSBP3-208ENST00000444533 BEX5Q5H9J7 111 aa12.39□□□□□ -0.43
SSBP3-208ENST00000444533 ARMC4Q5T2S8 1044 aa12.39□□□□□ -0.43
SSBP3-208ENST00000444533 ZNF770Q6IQ21 691 aaPredicted RBP12.39□□□□□ -0.43
SSBP3-208ENST00000444533 DNM1P34Q6PK57 102 aa12.39□□□□□ -0.43
SSBP3-208ENST00000444533 ZNF813Q6ZN06 617 aa12.39□□□□□ -0.43
SSBP3-208ENST00000444533 CLDN22Q8N7P3 220 aa12.39□□□□□ -0.43
SSBP3-208ENST00000444533 LRRC75AQ8NAA5 344 aa12.39□□□□□ -0.43
SSBP3-208ENST00000444533 OR1K1Q8NGR3 316 aa12.39□□□□□ -0.43
SSBP3-208ENST00000444533 OR52N5Q8NH56 324 aa12.39□□□□□ -0.43
SSBP3-208ENST00000444533 MAGEE2Q8TD90 523 aaPredicted RBP12.39□□□□□ -0.43
SSBP3-208ENST00000444533 CENPNQ96H22 339 aaPredicted RBP12.39□□□□□ -0.43
SSBP3-208ENST00000444533 SAMD8Q96LT4 415 aa12.39□□□□□ -0.43
SSBP3-208ENST00000444533 TSPAN32Q96QS1 320 aa12.39□□□□□ -0.43
SSBP3-208ENST00000444533 FOXB1Q99853 325 aa12.39□□□□□ -0.43
SSBP3-208ENST00000444533 SMURF2Q9HAU4 748 aa12.39□□□□□ -0.43
SSBP3-208ENST00000444533 NRIP3Q9NQ35 241 aa12.39□□□□□ -0.43
SSBP3-208ENST00000444533 SLC17A5Q9NRA2 495 aa12.39□□□□□ -0.43
SSBP3-208ENST00000444533 ENOPH1Q9UHY7 261 aa12.39□□□□□ -0.43
SSBP3-208ENST00000444533 ADAM18Q9Y3Q7 739 aa12.39□□□□□ -0.43
SSBP3-208ENST00000444533 PTPN13Q12923 2485 aa12.39□□□□□ -0.43
SSBP3-208ENST00000444533 A0A096LPE4 126 aa12.38□□□□□ -0.43
SSBP3-208ENST00000444533 TEX13CA0A0J9YWL9 993 aa12.38□□□□□ -0.43
SSBP3-208ENST00000444533 A0A1W2PPZ6 126 aa12.38□□□□□ -0.43
SSBP3-208ENST00000444533 ERICH4A6NGS2 130 aa12.38□□□□□ -0.43
SSBP3-208ENST00000444533 SOCS2O14508 198 aa12.38□□□□□ -0.43
SSBP3-208ENST00000444533 PPP1R3DO95685 299 aa12.38□□□□□ -0.43
SSBP3-208ENST00000444533 TBRG1Q3YBR2 411 aa12.38□□□□□ -0.43
SSBP3-208ENST00000444533 CLEC12AQ5QGZ9 265 aa12.38□□□□□ -0.43
SSBP3-208ENST00000444533 HIST2H2BCQ6DN03 193 aa12.38□□□□□ -0.43
SSBP3-208ENST00000444533 TMEM108Q6UXF1 575 aa12.38□□□□□ -0.43
SSBP3-208ENST00000444533 CD300LDQ6UXZ3 194 aa12.38□□□□□ -0.43
SSBP3-208ENST00000444533 NHLRC1Q6VVB1 395 aa12.38□□□□□ -0.43
SSBP3-208ENST00000444533 DPPA2Q7Z7J5 298 aa12.38□□□□□ -0.43
SSBP3-208ENST00000444533 DEPDC4Q8N2C3 294 aa12.38□□□□□ -0.43
SSBP3-208ENST00000444533 OR2T33Q8NG76 320 aa12.38□□□□□ -0.43
SSBP3-208ENST00000444533 ZNF519Q8TB69 540 aa12.38□□□□□ -0.43
SSBP3-208ENST00000444533 LRTOMTQ8WZ04 291 aa12.38□□□□□ -0.43
SSBP3-208ENST00000444533 MCHR2Q969V1 340 aa12.38□□□□□ -0.43
SSBP3-208ENST00000444533 Q96M85 177 aa12.38□□□□□ -0.43
SSBP3-208ENST00000444533 GPA33Q99795 319 aa12.38□□□□□ -0.43
SSBP3-208ENST00000444533 KCNS3Q9BQ31 491 aa12.38□□□□□ -0.43
SSBP3-208ENST00000444533 MRPL13Q9BYD1 178 aaKnown RBP12.38□□□□□ -0.43
SSBP3-208ENST00000444533 DENND2DQ9H6A0 471 aaPredicted RBP12.38□□□□□ -0.43
SSBP3-208ENST00000444533 IL20Q9NYY1 176 aa12.38□□□□□ -0.43
SSBP3-208ENST00000444533 PRSS37A4D1T9 235 aa12.37□□□□□ -0.43
SSBP3-208ENST00000444533 ARPC3O15145 178 aa12.37□□□□□ -0.43
SSBP3-208ENST00000444533 IFNGP01579 166 aa12.37□□□□□ -0.43
SSBP3-208ENST00000444533 OR8G3PP0DMU2 310 aa12.37□□□□□ -0.43
SSBP3-208ENST00000444533 NPR2P20594 1047 aa12.37□□□□□ -0.43
SSBP3-208ENST00000444533 POU1F1P28069 291 aa12.37□□□□□ -0.43
SSBP3-208ENST00000444533 CRABP1P29762 137 aa12.37□□□□□ -0.43
SSBP3-208ENST00000444533 MYBPC1Q00872 1141 aa12.37□□□□□ -0.43
SSBP3-208ENST00000444533 FHL1Q13642 323 aa12.37□□□□□ -0.43
SSBP3-208ENST00000444533 THSD4Q6ZMP0 1018 aa12.37□□□□□ -0.43
SSBP3-208ENST00000444533 AMIGO2Q86SJ2 522 aa12.37□□□□□ -0.43
SSBP3-208ENST00000444533 ICA1LQ8NDH6 482 aa12.37□□□□□ -0.43
SSBP3-208ENST00000444533 NSMAFQ92636 917 aa12.37□□□□□ -0.43
SSBP3-208ENST00000444533 HDAC2Q92769 488 aaKnown RBP12.37□□□□□ -0.43
SSBP3-208ENST00000444533 PIK3IP1Q96FE7 263 aa12.37□□□□□ -0.43
SSBP3-208ENST00000444533 BOD1Q96IK1 185 aa12.37□□□□□ -0.43
SSBP3-208ENST00000444533 KCNK17Q96T54 332 aa12.37□□□□□ -0.43
SSBP3-208ENST00000444533 TSSK6Q9BXA6 273 aa12.37□□□□□ -0.43
SSBP3-208ENST00000444533 OSBPL10Q9BXB5 764 aa12.37□□□□□ -0.43
SSBP3-208ENST00000444533 EGLN3Q9H6Z9 239 aa12.37□□□□□ -0.43
SSBP3-208ENST00000444533 PAPOLBQ9NRJ5 636 aaKnown RBP12.37□□□□□ -0.43
SSBP3-208ENST00000444533 ORC6Q9Y5N6 252 aa12.37□□□□□ -0.43
SSBP3-208ENST00000444533 FREM1Q5H8C1 2179 aa12.37□□□□□ -0.43
SSBP3-208ENST00000444533 ANKHD1Q8IWZ3 2542 aaKnown RBP12.37□□□□□ -0.43
SSBP3-208ENST00000444533 ARPC4-TTLL3A0A0A6YYG9 625 aa12.36□□□□□ -0.43
SSBP3-208ENST00000444533 UBL3O95164 117 aa12.36□□□□□ -0.43
SSBP3-208ENST00000444533 SOX14O95416 240 aa12.36□□□□□ -0.43
SSBP3-208ENST00000444533 TXNDC12O95881 172 aa12.36□□□□□ -0.43
SSBP3-208ENST00000444533 CD3EP07766 207 aa12.36□□□□□ -0.43
SSBP3-208ENST00000444533 CD79AP11912 226 aa12.36□□□□□ -0.43
SSBP3-208ENST00000444533 PRKACGP22612 351 aa12.36□□□□□ -0.43
SSBP3-208ENST00000444533 FOXG1P55316 489 aaPredicted RBP12.36□□□□□ -0.43
SSBP3-208ENST00000444533 RUNX1T1Q06455 604 aa12.36□□□□□ -0.43
SSBP3-208ENST00000444533 HIST3H3Q16695 136 aa12.36□□□□□ -0.43
SSBP3-208ENST00000444533 NRN1LQ496H8 165 aa12.36□□□□□ -0.43
SSBP3-208ENST00000444533 HIKESHIQ53FT3 197 aa12.36□□□□□ -0.43
SSBP3-208ENST00000444533 PHYHD1Q5SRE7 291 aa12.36□□□□□ -0.43
SSBP3-208ENST00000444533 LRFN4Q6PJG9 635 aa12.36□□□□□ -0.43
SSBP3-208ENST00000444533 LINGO2Q7L985 606 aa12.36□□□□□ -0.43
SSBP3-208ENST00000444533 FAM122BQ7Z309 247 aa12.36□□□□□ -0.43
SSBP3-208ENST00000444533 BCL2L2Q92843 193 aaPredicted RBP12.36□□□□□ -0.43
SSBP3-208ENST00000444533 RASD2Q96D21 266 aa12.36□□□□□ -0.43
SSBP3-208ENST00000444533 NIPSNAP1Q9BPW8 284 aa12.36□□□□□ -0.43
SSBP3-208ENST00000444533 PRRG3Q9BZD7 231 aa12.36□□□□□ -0.43
SSBP3-208ENST00000444533 SEMA6AQ9H2E6 1030 aa12.36□□□□□ -0.43
SSBP3-208ENST00000444533 CLEC4MQ9H2X3 399 aaPredicted RBP12.36□□□□□ -0.43
SSBP3-208ENST00000444533 RERGLQ9H628 205 aa12.36□□□□□ -0.43
SSBP3-208ENST00000444533 RNF121Q9H920 327 aa12.36□□□□□ -0.43
SSBP3-208ENST00000444533 SEC61A2Q9H9S3 476 aa12.36□□□□□ -0.43
SSBP3-208ENST00000444533 KRT84Q9NSB2 600 aa12.36□□□□□ -0.43
SSBP3-208ENST00000444533 KLHL21Q9UJP4 597 aa12.36□□□□□ -0.43
SSBP3-208ENST00000444533 FBXL3Q9UKT7 428 aa12.36□□□□□ -0.43
SSBP3-208ENST00000444533 SLC25A15Q9Y619 301 aa12.36□□□□□ -0.43
SSBP3-208ENST00000444533 ADGRG4Q8IZF6 3080 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms