RNA–Protein interactions for RNA: ENST00000443660.5

MRPL40-202, Transcript of mitochondrial ribosomal protein L40, humanhuman

TSL 2

Gene MRPL40, Length 954 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40-202ENST00000443660 OMGP23515 440 aa12.58□□□□□ -0.4
MRPL40-202ENST00000443660 ERVS71-1P61550 626 aa12.58□□□□□ -0.4
MRPL40-202ENST00000443660 UFM1P61960 85 aa12.58□□□□□ -0.4
MRPL40-202ENST00000443660 GLO1Q04760 184 aa12.58□□□□□ -0.4
MRPL40-202ENST00000443660 PUDPQ08623 228 aa12.58□□□□□ -0.4
MRPL40-202ENST00000443660 ALG10BQ5I7T1 473 aa12.58□□□□□ -0.4
MRPL40-202ENST00000443660 RPS26P11Q5JNZ5 115 aaPredicted RBP12.58□□□□□ -0.4
MRPL40-202ENST00000443660 KLF17Q5JT82 389 aaPredicted RBP12.58□□□□□ -0.4
MRPL40-202ENST00000443660 HIST2H2BDQ6DRA6 164 aa12.58□□□□□ -0.4
MRPL40-202ENST00000443660 SPATC1Q76KD6 591 aa12.58□□□□□ -0.4
MRPL40-202ENST00000443660 PXKQ7Z7A4 578 aa12.58□□□□□ -0.4
MRPL40-202ENST00000443660 NUDCD3Q8IVD9 361 aa12.58□□□□□ -0.4
MRPL40-202ENST00000443660 PAQR4Q8N4S7 273 aaPredicted RBP12.58□□□□□ -0.4
MRPL40-202ENST00000443660 C10orf53Q8N6V4 93 aa12.58□□□□□ -0.4
MRPL40-202ENST00000443660 LSMEM1Q8N8F7 131 aa12.58□□□□□ -0.4
MRPL40-202ENST00000443660 OR6S1Q8NH40 331 aa12.58□□□□□ -0.4
MRPL40-202ENST00000443660 TAF15Q92804 592 aaKnown RBP eCLIP12.58□□□□□ -0.4
MRPL40-202ENST00000443660 TMEM19Q96HH6 336 aa12.58□□□□□ -0.4
MRPL40-202ENST00000443660 ZBTB18Q99592 522 aa12.58□□□□□ -0.4
MRPL40-202ENST00000443660 SH3GL3Q99963 347 aa12.58□□□□□ -0.4
MRPL40-202ENST00000443660 RHOXF2Q9BQY4 288 aa12.58□□□□□ -0.4
MRPL40-202ENST00000443660 MMP27Q9H306 513 aa12.58□□□□□ -0.4
MRPL40-202ENST00000443660 BEX1Q9HBH7 125 aa12.58□□□□□ -0.4
MRPL40-202ENST00000443660 KLHL14Q9P2G3 628 aa12.58□□□□□ -0.4
MRPL40-202ENST00000443660 A0A1B0GWA3 101 aa12.57□□□□□ -0.4
MRPL40-202ENST00000443660 ANP32DO95626 131 aa12.57□□□□□ -0.4
MRPL40-202ENST00000443660 SNAP29O95721 258 aa12.57□□□□□ -0.4
MRPL40-202ENST00000443660 IGHMP01871 453 aa12.57□□□□□ -0.4
MRPL40-202ENST00000443660 CRYBA1P05813 215 aa12.57□□□□□ -0.4
MRPL40-202ENST00000443660 SBK2P0C263 348 aa12.57□□□□□ -0.4
MRPL40-202ENST00000443660 SLC36A2Q495M3 483 aa12.57□□□□□ -0.4
MRPL40-202ENST00000443660 ZNF362Q5T0B9 420 aaPredicted RBP12.57□□□□□ -0.4
MRPL40-202ENST00000443660 ULK3Q6PHR2 472 aa12.57□□□□□ -0.4
MRPL40-202ENST00000443660 KLHL36Q8N4N3 616 aa12.57□□□□□ -0.4
MRPL40-202ENST00000443660 ZNF781Q8N8C0 355 aa12.57□□□□□ -0.4
MRPL40-202ENST00000443660 OR1J1Q8NGS3 322 aa12.57□□□□□ -0.4
MRPL40-202ENST00000443660 GTF3AQ92664 365 aaKnown RBP12.57□□□□□ -0.4
MRPL40-202ENST00000443660 SLC47A1Q96FL8 570 aa12.57□□□□□ -0.4
MRPL40-202ENST00000443660 TEX37Q96LM6 180 aa12.57□□□□□ -0.4
MRPL40-202ENST00000443660 MRPL39Q9NYK5 338 aaKnown RBP12.57□□□□□ -0.4
MRPL40-202ENST00000443660 GLTPQ9NZD2 209 aa12.57□□□□□ -0.4
MRPL40-202ENST00000443660 PDP1Q9P0J1 537 aaPredicted RBP12.57□□□□□ -0.4
MRPL40-202ENST00000443660 IGKV1D-42A0A075B6H8 117 aa12.56□□□□□ -0.4
MRPL40-202ENST00000443660 TRAPPC2LH3BP13 241 aa12.56□□□□□ -0.4
MRPL40-202ENST00000443660 ITM2AO43736 263 aa12.56□□□□□ -0.4
MRPL40-202ENST00000443660 UBOX5O94941 541 aa12.56□□□□□ -0.4
MRPL40-202ENST00000443660 OR6A2O95222 327 aa12.56□□□□□ -0.4
MRPL40-202ENST00000443660 GPANK1O95872 356 aa12.56□□□□□ -0.4
MRPL40-202ENST00000443660 IGHV1-46P01743 117 aa12.56□□□□□ -0.4
MRPL40-202ENST00000443660 ZNF12P17014 697 aa12.56□□□□□ -0.4
MRPL40-202ENST00000443660 RPL14P50914 215 aaKnown RBP12.56□□□□□ -0.4
MRPL40-202ENST00000443660 BIDP55957 195 aa12.56□□□□□ -0.4
MRPL40-202ENST00000443660 ZNF718Q3SXZ3 478 aa12.56□□□□□ -0.4
MRPL40-202ENST00000443660 UNQ6126/PRO20091Q6UXV3 157 aa12.56□□□□□ -0.4
MRPL40-202ENST00000443660 NHLRC1Q6VVB1 395 aa12.56□□□□□ -0.4
MRPL40-202ENST00000443660 SLC16A14Q7RTX9 510 aa12.56□□□□□ -0.4
MRPL40-202ENST00000443660 SPICQ8N5J4 248 aa12.56□□□□□ -0.4
MRPL40-202ENST00000443660 KIR3DL3Q8N743 410 aa12.56□□□□□ -0.4
MRPL40-202ENST00000443660 OR52E2Q8NGJ4 325 aa12.56□□□□□ -0.4
MRPL40-202ENST00000443660 OR4F5Q8NH21 305 aa12.56□□□□□ -0.4
MRPL40-202ENST00000443660 TMEM54Q969K7 222 aa12.56□□□□□ -0.4
MRPL40-202ENST00000443660 DCLRE1CQ96SD1 692 aaKnown RBP12.56□□□□□ -0.4
MRPL40-202ENST00000443660 TCF7L2Q9NQB0 619 aa12.56□□□□□ -0.4
MRPL40-202ENST00000443660 CYSLTR2Q9NS75 346 aa12.56□□□□□ -0.4
MRPL40-202ENST00000443660 TMEM38BQ9NVV0 291 aa12.56□□□□□ -0.4
MRPL40-202ENST00000443660 EIF3KQ9UBQ5 218 aaKnown RBP12.56□□□□□ -0.4
MRPL40-202ENST00000443660 EGFL7Q9UHF1 273 aa12.56□□□□□ -0.4
MRPL40-202ENST00000443660 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.56□□□□□ -0.4
MRPL40-202ENST00000443660 POLR3KQ9Y2Y1 108 aaPredicted RBP12.56□□□□□ -0.4
MRPL40-202ENST00000443660 RAP2CQ9Y3L5 183 aa12.56□□□□□ -0.4
MRPL40-202ENST00000443660 INSIG2Q9Y5U4 225 aa12.56□□□□□ -0.4
MRPL40-202ENST00000443660 NPTNQ9Y639 398 aa12.56□□□□□ -0.4
MRPL40-202ENST00000443660 NOTCH1P46531 2555 aa12.56□□□□□ -0.4
MRPL40-202ENST00000443660 PLPP3O14495 311 aa12.55□□□□□ -0.4
MRPL40-202ENST00000443660 TIMM23O14925 209 aa12.55□□□□□ -0.4
MRPL40-202ENST00000443660 ZNF500O60304 480 aaPredicted RBP12.55□□□□□ -0.4
MRPL40-202ENST00000443660 CCNOP22674 350 aa12.55□□□□□ -0.4
MRPL40-202ENST00000443660 APLNRP35414 380 aa12.55□□□□□ -0.4
MRPL40-202ENST00000443660 LIPAP38571 399 aa12.55□□□□□ -0.4
MRPL40-202ENST00000443660 MVDP53602 400 aa12.55□□□□□ -0.4
MRPL40-202ENST00000443660 SRSF4Q08170 494 aaKnown RBP12.55□□□□□ -0.4
MRPL40-202ENST00000443660 FAM91A1Q658Y4 838 aa12.55□□□□□ -0.4
MRPL40-202ENST00000443660 BRICD5Q6PL45 260 aa12.55□□□□□ -0.4
MRPL40-202ENST00000443660 WDR88Q6ZMY6 472 aa12.55□□□□□ -0.4
MRPL40-202ENST00000443660 KIRREL3Q8IZU9 778 aa12.55□□□□□ -0.4
MRPL40-202ENST00000443660 OR4K5Q8NGD3 323 aa12.55□□□□□ -0.4
MRPL40-202ENST00000443660 OR6X1Q8NH79 312 aa12.55□□□□□ -0.4
MRPL40-202ENST00000443660 UBE2FQ969M7 185 aa12.55□□□□□ -0.4
MRPL40-202ENST00000443660 ZNF566Q969W8 418 aa12.55□□□□□ -0.4
MRPL40-202ENST00000443660 DIRC2Q96SL1 478 aa12.55□□□□□ -0.4
MRPL40-202ENST00000443660 NUF2Q9BZD4 464 aa12.55□□□□□ -0.4
MRPL40-202ENST00000443660 TPT1P8Q9HAU6 139 aa12.55□□□□□ -0.4
MRPL40-202ENST00000443660 TMEM27Q9HBJ8 222 aa12.55□□□□□ -0.4
MRPL40-202ENST00000443660 ZDHHC8Q9ULC8 765 aa12.55□□□□□ -0.4
MRPL40-202ENST00000443660 C5orf58C9J3I9 102 aa12.54□□□□□ -0.4
MRPL40-202ENST00000443660 TM9SF1O15321 606 aa12.54□□□□□ -0.4
MRPL40-202ENST00000443660 DHHO43323 396 aa12.54□□□□□ -0.4
MRPL40-202ENST00000443660 MFN2O95140 757 aa12.54□□□□□ -0.4
MRPL40-202ENST00000443660 BGLAPP02818 100 aa12.54□□□□□ -0.4
MRPL40-202ENST00000443660 SERPINE1P05121 402 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms