RNA–Protein interactions for RNA: ENST00000443561.3

PDLIM2-212, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-212ENST00000443561 IGLV1-44P01699 117 aa11.2□□□□□ -0.62
PDLIM2-212ENST00000443561 SCG5P05408 212 aa11.2□□□□□ -0.62
PDLIM2-212ENST00000443561 CD14P08571 375 aa11.2□□□□□ -0.62
PDLIM2-212ENST00000443561 B4GALT1P15291 398 aa11.2□□□□□ -0.62
PDLIM2-212ENST00000443561 ZNF83P51522 516 aa11.2□□□□□ -0.62
PDLIM2-212ENST00000443561 SMIM11AP58511 58 aa11.2□□□□□ -0.62
PDLIM2-212ENST00000443561 TSPAN31Q12999 210 aa11.2□□□□□ -0.62
PDLIM2-212ENST00000443561 ANKDD1AQ495B1 522 aa11.2□□□□□ -0.62
PDLIM2-212ENST00000443561 C10orf128Q5T292 105 aa11.2□□□□□ -0.62
PDLIM2-212ENST00000443561 OR7E24Q6IFN5 339 aa11.2□□□□□ -0.62
PDLIM2-212ENST00000443561 HMBOX1Q6NT76 420 aa11.2□□□□□ -0.62
PDLIM2-212ENST00000443561 ANKRD16Q6P6B7 361 aa11.2□□□□□ -0.62
PDLIM2-212ENST00000443561 ZNF704Q6ZNC4 412 aaPredicted RBP11.2□□□□□ -0.62
PDLIM2-212ENST00000443561 P2RY8Q86VZ1 359 aa11.2□□□□□ -0.62
PDLIM2-212ENST00000443561 ARIH2OSQ8N7S6 290 aa11.2□□□□□ -0.62
PDLIM2-212ENST00000443561 OR6N1Q8NGY5 312 aa11.2□□□□□ -0.62
PDLIM2-212ENST00000443561 ZNF566Q969W8 418 aa11.2□□□□□ -0.62
PDLIM2-212ENST00000443561 DUS3LQ96G46 650 aaKnown RBP11.2□□□□□ -0.62
PDLIM2-212ENST00000443561 FOXB1Q99853 325 aa11.2□□□□□ -0.62
PDLIM2-212ENST00000443561 NIPSNAP1Q9BPW8 284 aa11.2□□□□□ -0.62
PDLIM2-212ENST00000443561 EGLN3Q9H6Z9 239 aa11.2□□□□□ -0.62
PDLIM2-212ENST00000443561 SAMHD1Q9Y3Z3 626 aaKnown RBP11.2□□□□□ -0.62
PDLIM2-212ENST00000443561 TEX13CA0A0J9YWL9 993 aa11.19□□□□□ -0.62
PDLIM2-212ENST00000443561 ZNF726A6NNF4 738 aa11.19□□□□□ -0.62
PDLIM2-212ENST00000443561 DCTN6O00399 190 aa11.19□□□□□ -0.62
PDLIM2-212ENST00000443561 CASKO14936 926 aa11.19□□□□□ -0.62
PDLIM2-212ENST00000443561 TIPRLO75663 272 aa11.19□□□□□ -0.62
PDLIM2-212ENST00000443561 KRT36O76013 467 aa11.19□□□□□ -0.62
PDLIM2-212ENST00000443561 NDUFB2O95178 105 aa11.19□□□□□ -0.62
PDLIM2-212ENST00000443561 ATE1O95260 518 aa11.19□□□□□ -0.62
PDLIM2-212ENST00000443561 PPP1R3DO95685 299 aa11.19□□□□□ -0.62
PDLIM2-212ENST00000443561 TXNDC12O95881 172 aa11.19□□□□□ -0.62
PDLIM2-212ENST00000443561 CST1P01037 141 aa11.19□□□□□ -0.62
PDLIM2-212ENST00000443561 IGHG1P01857 330 aa11.19□□□□□ -0.62
PDLIM2-212ENST00000443561 QDPRP09417 244 aa11.19□□□□□ -0.62
PDLIM2-212ENST00000443561 PATE4P0C8F1 98 aa11.19□□□□□ -0.62
PDLIM2-212ENST00000443561 CDAP32320 146 aa11.19□□□□□ -0.62
PDLIM2-212ENST00000443561 ACVR1BP36896 505 aa11.19□□□□□ -0.62
PDLIM2-212ENST00000443561 DAP3P51398 398 aaKnown RBP11.19□□□□□ -0.62
PDLIM2-212ENST00000443561 SH3BGRP55822 239 aaPredicted RBP11.19□□□□□ -0.62
PDLIM2-212ENST00000443561 ETFDHQ16134 617 aa11.19□□□□□ -0.62
PDLIM2-212ENST00000443561 MICAQ29983 383 aa11.19□□□□□ -0.62
PDLIM2-212ENST00000443561 ADAM5Q6NVV9 412 aa11.19□□□□□ -0.62
PDLIM2-212ENST00000443561 KLHL17Q6TDP4 642 aa11.19□□□□□ -0.62
PDLIM2-212ENST00000443561 PAMR1Q6UXH9 720 aa11.19□□□□□ -0.62
PDLIM2-212ENST00000443561 FOXL2NBQ6ZUU3 175 aa11.19□□□□□ -0.62
PDLIM2-212ENST00000443561 ABHD12BQ7Z5M8 362 aaPredicted RBP11.19□□□□□ -0.62
PDLIM2-212ENST00000443561 AQP11Q8NBQ7 271 aa11.19□□□□□ -0.62
PDLIM2-212ENST00000443561 FANK1Q8TC84 345 aa11.19□□□□□ -0.62
PDLIM2-212ENST00000443561 SAMD8Q96LT4 415 aa11.19□□□□□ -0.62
PDLIM2-212ENST00000443561 MMADHCQ9H3L0 296 aaPredicted RBP11.19□□□□□ -0.62
PDLIM2-212ENST00000443561 TMEM38BQ9NVV0 291 aa11.19□□□□□ -0.62
PDLIM2-212ENST00000443561 REV1Q9UBZ9 1251 aa11.19□□□□□ -0.62
PDLIM2-212ENST00000443561 AMDHD2Q9Y303 409 aa11.19□□□□□ -0.62
PDLIM2-212ENST00000443561 CCDC168Q8NDH2 2452 aa11.19□□□□□ -0.62
PDLIM2-212ENST00000443561 TEP1Q99973 2627 aaKnown RBP11.19□□□□□ -0.62
PDLIM2-212ENST00000443561 ARFGEF3Q5TH69 2177 aa11.18□□□□□ -0.62
PDLIM2-212ENST00000443561 SLC22A23A1A5C7 686 aa11.18□□□□□ -0.62
PDLIM2-212ENST00000443561 CENPBD1B2RD01 187 aa11.18□□□□□ -0.62
PDLIM2-212ENST00000443561 H3BNX3 289 aa11.18□□□□□ -0.62
PDLIM2-212ENST00000443561 BHLHE40O14503 412 aa11.18□□□□□ -0.62
PDLIM2-212ENST00000443561 KRT33AO76009 404 aa11.18□□□□□ -0.62
PDLIM2-212ENST00000443561 CCNB2O95067 398 aa11.18□□□□□ -0.62
PDLIM2-212ENST00000443561 IGKV3-15P01624 115 aa11.18□□□□□ -0.62
PDLIM2-212ENST00000443561 HLA-HP01893 362 aa11.18□□□□□ -0.62
PDLIM2-212ENST00000443561 CD53P19397 219 aa11.18□□□□□ -0.62
PDLIM2-212ENST00000443561 CD40P25942 277 aa11.18□□□□□ -0.62
PDLIM2-212ENST00000443561 CALCRP30988 508 aa11.18□□□□□ -0.62
PDLIM2-212ENST00000443561 CDKN2AP42771 156 aaKnown RBP11.18□□□□□ -0.62
PDLIM2-212ENST00000443561 RASSF2P50749 326 aa11.18□□□□□ -0.62
PDLIM2-212ENST00000443561 PRPS1P60891 318 aa11.18□□□□□ -0.62
PDLIM2-212ENST00000443561 TAF11Q15544 211 aa11.18□□□□□ -0.62
PDLIM2-212ENST00000443561 ZNF362Q5T0B9 420 aaPredicted RBP11.18□□□□□ -0.62
PDLIM2-212ENST00000443561 OTPQ5XKR4 325 aa11.18□□□□□ -0.62
PDLIM2-212ENST00000443561 SMARCD3Q6STE5 483 aa11.18□□□□□ -0.62
PDLIM2-212ENST00000443561 ZNF813Q6ZN06 617 aa11.18□□□□□ -0.62
PDLIM2-212ENST00000443561 CCDC121Q6ZUS5 278 aa11.18□□□□□ -0.62
PDLIM2-212ENST00000443561 MDP1Q86V88 176 aa11.18□□□□□ -0.62
PDLIM2-212ENST00000443561 ZNF584Q8IVC4 421 aa11.18□□□□□ -0.62
PDLIM2-212ENST00000443561 SKA3Q8IX90 412 aa11.18□□□□□ -0.62
PDLIM2-212ENST00000443561 OR10G2Q8NGC3 310 aa11.18□□□□□ -0.62
PDLIM2-212ENST00000443561 OR4Q3Q8NH05 313 aa11.18□□□□□ -0.62
PDLIM2-212ENST00000443561 GNPDA2Q8TDQ7 276 aa11.18□□□□□ -0.62
PDLIM2-212ENST00000443561 DDOQ99489 341 aa11.18□□□□□ -0.62
PDLIM2-212ENST00000443561 USB1Q9BQ65 265 aaKnown RBP11.18□□□□□ -0.62
PDLIM2-212ENST00000443561 DGCR6LQ9BY27 220 aa11.18□□□□□ -0.62
PDLIM2-212ENST00000443561 REEP1Q9H902 201 aa11.18□□□□□ -0.62
PDLIM2-212ENST00000443561 PLEKHA6Q9Y2H5 1048 aa11.18□□□□□ -0.62
PDLIM2-212ENST00000443561 IER3IP1Q9Y5U9 82 aa11.18□□□□□ -0.62
PDLIM2-212ENST00000443561 M0R1B8 84 aa11.17□□□□□ -0.62
PDLIM2-212ENST00000443561 ABCD4O14678 606 aa11.17□□□□□ -0.62
PDLIM2-212ENST00000443561 MGRN1O60291 552 aa11.17□□□□□ -0.62
PDLIM2-212ENST00000443561 SOX14O95416 240 aa11.17□□□□□ -0.62
PDLIM2-212ENST00000443561 MMP7P09237 267 aaPredicted RBP11.17□□□□□ -0.62
PDLIM2-212ENST00000443561 CECR9P0C854 216 aa11.17□□□□□ -0.62
PDLIM2-212ENST00000443561 CTLA4P16410 223 aa11.17□□□□□ -0.62
PDLIM2-212ENST00000443561 ZNF14P17017 642 aaPredicted RBP11.17□□□□□ -0.62
PDLIM2-212ENST00000443561 PRKACGP22612 351 aa11.17□□□□□ -0.62
PDLIM2-212ENST00000443561 SDHAP31040 664 aa11.17□□□□□ -0.62
PDLIM2-212ENST00000443561 CLRN1P58418 232 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms